RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
RAVER1-204ENST00000592208 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
RAVER1-204ENST00000592208 CASKIN1Q8WXD9 1431 aa18.54■□□□□ 0.56
RAVER1-204ENST00000592208 KIF21BO75037 1637 aa18.54■□□□□ 0.56
RAVER1-204ENST00000592208 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
RAVER1-204ENST00000592208 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
RAVER1-204ENST00000592208 SYNJ2O15056 1496 aa18.53■□□□□ 0.56
RAVER1-204ENST00000592208 AMPHP49418 695 aa18.53■□□□□ 0.56
RAVER1-204ENST00000592208 NOP58Q9Y2X3 529 aaKnown RBP18.52■□□□□ 0.56
RAVER1-204ENST00000592208 PTMSP20962 102 aa18.52■□□□□ 0.56
RAVER1-204ENST00000592208 GOLGA6L4A6NEF3 574 aa18.52■□□□□ 0.56
RAVER1-204ENST00000592208 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.56
RAVER1-204ENST00000592208 LTV1Q96GA3 475 aaPredicted RBP18.52■□□□□ 0.55
RAVER1-204ENST00000592208 MINK1Q8N4C8 1332 aaPredicted RBP18.51■□□□□ 0.55
RAVER1-204ENST00000592208 STK31Q9BXU1 1019 aa18.51■□□□□ 0.55
RAVER1-204ENST00000592208 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
RAVER1-204ENST00000592208 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
RAVER1-204ENST00000592208 PMFBP1Q8TBY8 1022 aa18.49■□□□□ 0.55
RAVER1-204ENST00000592208 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
RAVER1-204ENST00000592208 KIAA1211Q6ZU35 1233 aa18.49■□□□□ 0.55
RAVER1-204ENST00000592208 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
RAVER1-204ENST00000592208 NCOA2Q15596 1464 aa18.48■□□□□ 0.55
RAVER1-204ENST00000592208 HMMRO75330 724 aa18.48■□□□□ 0.55
RAVER1-204ENST00000592208 ANKRD50Q9ULJ7 1429 aa18.48■□□□□ 0.55
RAVER1-204ENST00000592208 ARAP1Q96P48 1450 aa18.48■□□□□ 0.55
RAVER1-204ENST00000592208 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
RAVER1-204ENST00000592208 PANK3Q9H999 370 aa18.47■□□□□ 0.55
RAVER1-204ENST00000592208 EVC2Q86UK5 1308 aa18.47■□□□□ 0.55
RAVER1-204ENST00000592208 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
RAVER1-204ENST00000592208 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
RAVER1-204ENST00000592208 KIAA0586Q9BVV6 1533 aa18.46■□□□□ 0.55
RAVER1-204ENST00000592208 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
RAVER1-204ENST00000592208 FYCO1Q9BQS8 1478 aa18.44■□□□□ 0.54
RAVER1-204ENST00000592208 ARHGAP5Q13017 1502 aa18.44■□□□□ 0.54
RAVER1-204ENST00000592208 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
RAVER1-204ENST00000592208 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
RAVER1-204ENST00000592208 USP47Q96K76 1375 aa18.43■□□□□ 0.54
RAVER1-204ENST00000592208 HTATSF1O43719 755 aaKnown RBP18.42■□□□□ 0.54
RAVER1-204ENST00000592208 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.42■□□□□ 0.54
RAVER1-204ENST00000592208 L1TD1Q5T7N2 865 aaKnown RBP18.41■□□□□ 0.54
RAVER1-204ENST00000592208 GPATCH3Q96I76 525 aa18.41■□□□□ 0.54
RAVER1-204ENST00000592208 COG3Q96JB2 828 aa18.41■□□□□ 0.54
RAVER1-204ENST00000592208 NAP1L2Q9ULW6 460 aaPredicted RBP18.4■□□□□ 0.54
RAVER1-204ENST00000592208 CGNL1Q0VF96 1302 aa18.38■□□□□ 0.53
RAVER1-204ENST00000592208 ITPRIPQ8IWB1 547 aa18.38■□□□□ 0.53
RAVER1-204ENST00000592208 APBB1O00213 710 aa18.38■□□□□ 0.53
RAVER1-204ENST00000592208 GBP4Q96PP9 640 aa18.37■□□□□ 0.53
RAVER1-204ENST00000592208 TMX4Q9H1E5 349 aaPredicted RBP18.37■□□□□ 0.53
RAVER1-204ENST00000592208 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
RAVER1-204ENST00000592208 SMC4Q9NTJ3 1288 aa18.36■□□□□ 0.53
RAVER1-204ENST00000592208 RAPGEF3O95398 923 aa18.35■□□□□ 0.53
RAVER1-204ENST00000592208 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
RAVER1-204ENST00000592208 TROQ12816 1431 aaPredicted RBP18.35■□□□□ 0.53
RAVER1-204ENST00000592208 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
RAVER1-204ENST00000592208 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
RAVER1-204ENST00000592208 CCDC34Q96HJ3 373 aa18.34■□□□□ 0.53
RAVER1-204ENST00000592208 CUL7Q14999 1698 aa18.34■□□□□ 0.53
RAVER1-204ENST00000592208 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.53
RAVER1-204ENST00000592208 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.53
RAVER1-204ENST00000592208 URB2Q14146 1524 aaKnown RBP18.33■□□□□ 0.53
RAVER1-204ENST00000592208 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
RAVER1-204ENST00000592208 PLCB2Q00722 1185 aa18.32■□□□□ 0.52
RAVER1-204ENST00000592208 TAOK2Q9UL54 1235 aa18.32■□□□□ 0.52
RAVER1-204ENST00000592208 PSME1Q06323 249 aa18.32■□□□□ 0.52
RAVER1-204ENST00000592208 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
RAVER1-204ENST00000592208 CHMP4CQ96CF2 233 aa18.32■□□□□ 0.52
RAVER1-204ENST00000592208 GNL2Q13823 731 aaKnown RBP18.3■□□□□ 0.52
RAVER1-204ENST00000592208 CLUAP1Q96AJ1 413 aa18.3■□□□□ 0.52
RAVER1-204ENST00000592208 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
RAVER1-204ENST00000592208 SYAP1Q96A49 352 aaPredicted RBP18.3■□□□□ 0.52
RAVER1-204ENST00000592208 EVA1CP58658 441 aa18.29■□□□□ 0.52
RAVER1-204ENST00000592208 PRKRIP1Q9H875 184 aaPredicted RBP18.29■□□□□ 0.52
RAVER1-204ENST00000592208 GRIN2AQ12879 1464 aa18.29■□□□□ 0.52
RAVER1-204ENST00000592208 TXNDC2Q86VQ3 553 aa18.28■□□□□ 0.52
RAVER1-204ENST00000592208 SLC4A10Q6U841 1118 aa18.28■□□□□ 0.52
RAVER1-204ENST00000592208 TPRNQ4KMQ1 711 aa18.27■□□□□ 0.52
RAVER1-204ENST00000592208 TAF7LQ5H9L4 462 aa18.27■□□□□ 0.52
RAVER1-204ENST00000592208 CFAP70Q5T0N1 1121 aa18.27■□□□□ 0.52
RAVER1-204ENST00000592208 C9orf84Q5VXU9 1444 aa18.26■□□□□ 0.51
RAVER1-204ENST00000592208 ATF3P18847 181 aa18.26■□□□□ 0.51
RAVER1-204ENST00000592208 KIF3AQ9Y496 699 aa18.26■□□□□ 0.51
RAVER1-204ENST00000592208 CSPP1Q1MSJ5 1256 aa18.26■□□□□ 0.51
RAVER1-204ENST00000592208 IQGAP2Q13576 1575 aa18.26■□□□□ 0.51
RAVER1-204ENST00000592208 E9PSI1 815 aa18.26■□□□□ 0.51
RAVER1-204ENST00000592208 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
RAVER1-204ENST00000592208 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
RAVER1-204ENST00000592208 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
RAVER1-204ENST00000592208 MIA2Q96PC5 1412 aa18.24■□□□□ 0.51
RAVER1-204ENST00000592208 C1orf141Q5JVX7 400 aa18.23■□□□□ 0.51
RAVER1-204ENST00000592208 TEFQ10587 303 aa18.23■□□□□ 0.51
RAVER1-204ENST00000592208 EHBP1L1Q8N3D4 1523 aa18.22■□□□□ 0.51
RAVER1-204ENST00000592208 MSNP26038 577 aaKnown RBP18.22■□□□□ 0.51
RAVER1-204ENST00000592208 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
RAVER1-204ENST00000592208 RBM19Q9Y4C8 960 aaKnown RBP18.22■□□□□ 0.51
RAVER1-204ENST00000592208 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
RAVER1-204ENST00000592208 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
RAVER1-204ENST00000592208 LRRFIP1Q32MZ4 808 aaKnown RBP18.19■□□□□ 0.5
RAVER1-204ENST00000592208 GTF2E1P29083 439 aaPredicted RBP18.19■□□□□ 0.5
RAVER1-204ENST00000592208 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
RAVER1-204ENST00000592208 APAF1O14727 1248 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms