RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
LINC01539-205ENST00000591974 DHX29Q7Z478 1369 aaKnown RBP15.28■□□□□ 0.04
LINC01539-205ENST00000591974 FRMPD1Q5SYB0 1578 aa15.28■□□□□ 0.04
LINC01539-205ENST00000591974 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
LINC01539-205ENST00000591974 BCORL1Q5H9F3 1711 aa15.27■□□□□ 0.03
LINC01539-205ENST00000591974 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.03
LINC01539-205ENST00000591974 TONSLQ96HA7 1378 aa15.27■□□□□ 0.03
LINC01539-205ENST00000591974 ZMYM4Q5VZL5 1548 aa15.26■□□□□ 0.03
LINC01539-205ENST00000591974 PKD2Q13563 968 aa15.26■□□□□ 0.03
LINC01539-205ENST00000591974 FOXD1Q16676 465 aa15.26■□□□□ 0.03
LINC01539-205ENST00000591974 RPRD2Q5VT52 1461 aaKnown RBP15.26■□□□□ 0.03
LINC01539-205ENST00000591974 A2MP01023 1474 aa15.25■□□□□ 0.03
LINC01539-205ENST00000591974 RNF17Q9BXT8 1623 aaKnown RBP15.24■□□□□ 0.03
LINC01539-205ENST00000591974 PRDM15P57071 1507 aaPredicted RBP15.24■□□□□ 0.03
LINC01539-205ENST00000591974 DIP2CQ9Y2E4 1556 aa15.24■□□□□ 0.03
LINC01539-205ENST00000591974 VWDEQ8N2E2 1590 aa15.23■□□□□ 0.03
LINC01539-205ENST00000591974 RAPGEF3O95398 923 aa15.23■□□□□ 0.03
LINC01539-205ENST00000591974 MROH1Q8NDA8 1641 aa15.22■□□□□ 0.03
LINC01539-205ENST00000591974 TET3O43151 1660 aa15.22■□□□□ 0.03
LINC01539-205ENST00000591974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC01539-205ENST00000591974 PPP1R15AO75807 674 aaPredicted RBP15.2■□□□□ 0.02
LINC01539-205ENST00000591974 E9PCH4 1651 aa15.19■□□□□ 0.02
LINC01539-205ENST00000591974 KANK1Q14678 1352 aa15.19■□□□□ 0.02
LINC01539-205ENST00000591974 KIF3BO15066 747 aa15.18■□□□□ 0.02
LINC01539-205ENST00000591974 ATP10AO60312 1499 aa15.17■□□□□ 0.02
LINC01539-205ENST00000591974 ZNF316A6NFI3 1004 aaPredicted RBP15.16■□□□□ 0.02
LINC01539-205ENST00000591974 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
LINC01539-205ENST00000591974 LMTK2Q8IWU2 1503 aa15.16■□□□□ 0.02
LINC01539-205ENST00000591974 YEATS2Q9ULM3 1422 aa15.16■□□□□ 0.02
LINC01539-205ENST00000591974 REREQ9P2R6 1566 aa15.15■□□□□ 0.02
LINC01539-205ENST00000591974 SPHKAPQ2M3C7 1700 aa15.15■□□□□ 0.02
LINC01539-205ENST00000591974 CEP152O94986 1710 aa15.15■□□□□ 0.02
LINC01539-205ENST00000591974 PLA2R1Q13018 1463 aa15.13■□□□□ 0.01
LINC01539-205ENST00000591974 EFCAB6Q5THR3 1501 aa15.13■□□□□ 0.01
LINC01539-205ENST00000591974 CCDC144AA2RUR9 1427 aa15.13■□□□□ 0.01
LINC01539-205ENST00000591974 L3MBTL2Q969R5 705 aa15.12■□□□□ 0.01
LINC01539-205ENST00000591974 ARHGEF40Q8TER5 1519 aa15.12■□□□□ 0.01
LINC01539-205ENST00000591974 ZC3H13Q5T200 1668 aaKnown RBP15.11■□□□□ 0.01
LINC01539-205ENST00000591974 COL17A1Q9UMD9 1497 aaPredicted RBP15.11■□□□□ 0.01
LINC01539-205ENST00000591974 TRPM2O94759 1503 aa15.11■□□□□ 0.01
LINC01539-205ENST00000591974 PTPRTO14522 1441 aa15.09■□□□□ 0.01
LINC01539-205ENST00000591974 AGLP35573 1532 aa15.09■□□□□ 0.01
LINC01539-205ENST00000591974 ABCC3O15438 1527 aa15.08■□□□□ 0.01
LINC01539-205ENST00000591974 CAMSAP1Q5T5Y3 1602 aa15.08■□□□□ 0
LINC01539-205ENST00000591974 GGT6Q6P531 493 aa15.06■□□□□ 0
LINC01539-205ENST00000591974 CLTCL1P53675 1640 aa15.05■□□□□ -0
LINC01539-205ENST00000591974 CFAP65Q6ZU64 1925 aaKnown RBP15.04■□□□□ -0
LINC01539-205ENST00000591974 NEURL4Q96JN8 1562 aa15.04■□□□□ -0
LINC01539-205ENST00000591974 UHRF1BP1Q6BDS2 1440 aa15.03■□□□□ -0
LINC01539-205ENST00000591974 SIGLEC1Q9BZZ2 1709 aa15.03■□□□□ -0
LINC01539-205ENST00000591974 KIF1BO60333 1816 aa15.03■□□□□ -0
LINC01539-205ENST00000591974 WASHC2CQ9Y4E1 1318 aa15.02■□□□□ -0
LINC01539-205ENST00000591974 NPATQ14207 1427 aa15.02■□□□□ -0
LINC01539-205ENST00000591974 ARHGAP31Q2M1Z3 1444 aa15.02□□□□□ -0.01
LINC01539-205ENST00000591974 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
LINC01539-205ENST00000591974 SPATA31E1Q6ZUB1 1445 aa15□□□□□ -0.01
LINC01539-205ENST00000591974 NBPF8Q3BBV2 869 aa15□□□□□ -0.01
LINC01539-205ENST00000591974 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
LINC01539-205ENST00000591974 CNTLNQ9NXG0 1405 aa14.99□□□□□ -0.01
LINC01539-205ENST00000591974 DIEXFQ68CQ4 756 aaKnown RBP14.98□□□□□ -0.01
LINC01539-205ENST00000591974 RALGAPBQ86X10 1494 aa14.97□□□□□ -0.01
LINC01539-205ENST00000591974 NOS1P29475 1434 aa14.96□□□□□ -0.01
LINC01539-205ENST00000591974 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.01
LINC01539-205ENST00000591974 PREX1Q8TCU6 1659 aa14.96□□□□□ -0.01
LINC01539-205ENST00000591974 UGGT1Q9NYU2 1555 aa14.96□□□□□ -0.02
LINC01539-205ENST00000591974 PIK3C2BO00750 1634 aa14.96□□□□□ -0.02
LINC01539-205ENST00000591974 TRPM1Q7Z4N2 1603 aa14.96□□□□□ -0.02
LINC01539-205ENST00000591974 CLTCQ00610 1675 aaKnown RBP14.95□□□□□ -0.02
LINC01539-205ENST00000591974 PRAG1Q86YV5 1406 aa14.95□□□□□ -0.02
LINC01539-205ENST00000591974 MROH2AA6NES4 1674 aa14.94□□□□□ -0.02
LINC01539-205ENST00000591974 IFT172Q9UG01 1749 aa14.94□□□□□ -0.02
LINC01539-205ENST00000591974 SYNMO15061 1565 aa14.94□□□□□ -0.02
LINC01539-205ENST00000591974 RGL3Q3MIN7 710 aa14.94□□□□□ -0.02
LINC01539-205ENST00000591974 STAC3Q96MF2 364 aa14.94□□□□□ -0.02
LINC01539-205ENST00000591974 ADGRB3O60242 1522 aa14.94□□□□□ -0.02
LINC01539-205ENST00000591974 EIF4G2P78344 907 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC01539-205ENST00000591974 ZNF326Q5BKZ1 582 aaKnown RBP14.92□□□□□ -0.02
LINC01539-205ENST00000591974 KDM2AQ9Y2K7 1162 aa14.92□□□□□ -0.02
LINC01539-205ENST00000591974 LAMC1P11047 1609 aa14.91□□□□□ -0.02
LINC01539-205ENST00000591974 MADDQ8WXG6 1647 aa14.91□□□□□ -0.02
LINC01539-205ENST00000591974 POLR1AO95602 1720 aaPredicted RBP14.91□□□□□ -0.02
LINC01539-205ENST00000591974 HSPA5P11021 654 aaKnown RBP14.89□□□□□ -0.03
LINC01539-205ENST00000591974 MYOM2P54296 1465 aa14.89□□□□□ -0.03
LINC01539-205ENST00000591974 PPLO60437 1756 aa14.89□□□□□ -0.03
LINC01539-205ENST00000591974 ERVK-7P63135 1459 aa14.88□□□□□ -0.03
LINC01539-205ENST00000591974 KIAA1210Q9ULL0 1709 aa14.88□□□□□ -0.03
LINC01539-205ENST00000591974 SPATA31D1Q6ZQQ2 1576 aa14.87□□□□□ -0.03
LINC01539-205ENST00000591974 GPRASP1Q5JY77 1395 aa14.87□□□□□ -0.03
LINC01539-205ENST00000591974 HIRIP3Q9BW71 556 aaPredicted RBP14.86□□□□□ -0.03
LINC01539-205ENST00000591974 ROCK2O75116 1388 aaKnown RBP14.86□□□□□ -0.03
LINC01539-205ENST00000591974 USP47Q96K76 1375 aa14.86□□□□□ -0.03
LINC01539-205ENST00000591974 SLC52A1Q9NWF4 448 aa14.86□□□□□ -0.03
LINC01539-205ENST00000591974 MYO5BQ9ULV0 1848 aa14.86□□□□□ -0.03
LINC01539-205ENST00000591974 MLECQ14165 292 aa14.85□□□□□ -0.03
LINC01539-205ENST00000591974 ARID4BQ4LE39 1312 aaPredicted RBP14.84□□□□□ -0.03
LINC01539-205ENST00000591974 CARD11Q9BXL7 1154 aa14.84□□□□□ -0.03
LINC01539-205ENST00000591974 TMEM131LA2VDJ0 1609 aa14.83□□□□□ -0.04
LINC01539-205ENST00000591974 ESF1Q9H501 851 aaKnown RBP14.83□□□□□ -0.04
LINC01539-205ENST00000591974 NRXN1Q9ULB1 1477 aa14.83□□□□□ -0.04
LINC01539-205ENST00000591974 RPGRIP1LQ68CZ1 1315 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms