RNA–Protein interactions for RNA: ENST00000591471.5

HKR1-223, Transcript of HKR1, GLI-Kruppel zinc finger family member, human

TSL 2 BASIC

Gene HKR1, Length 3,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HKR1-223	ENST00000591471	SPAG9	O60271	1321 aa	Known RBP	11.11	□□□□□ -0.63
HKR1-223	ENST00000591471	TET3	O43151	1660 aa		11.11	□□□□□ -0.63
HKR1-223	ENST00000591471	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.1	□□□□□ -0.63
HKR1-223	ENST00000591471	A2M	P01023	1474 aa		11.1	□□□□□ -0.63
HKR1-223	ENST00000591471	ATP10A	O60312	1499 aa		11.1	□□□□□ -0.63
HKR1-223	ENST00000591471	PZP	P20742	1482 aa		11.09	□□□□□ -0.63
HKR1-223	ENST00000591471	DIEXF	Q68CQ4	756 aa	Known RBP	11.09	□□□□□ -0.63
HKR1-223	ENST00000591471	TIMELESS	Q9UNS1	1208 aa		11.07	□□□□□ -0.64
HKR1-223	ENST00000591471	RPRD2	Q5VT52	1461 aa	Known RBP	11.06	□□□□□ -0.64
HKR1-223	ENST00000591471	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.06	□□□□□ -0.64
HKR1-223	ENST00000591471	PPP6R1	Q9UPN7	881 aa		11.05	□□□□□ -0.64
HKR1-223	ENST00000591471	MROH2A	A6NES4	1674 aa		11.05	□□□□□ -0.64
HKR1-223	ENST00000591471	EFCAB6	Q5THR3	1501 aa		11.03	□□□□□ -0.64
HKR1-223	ENST00000591471	ARHGAP31	Q2M1Z3	1444 aa		11.03	□□□□□ -0.64
HKR1-223	ENST00000591471	AFAP1	Q8N556	730 aa		11.03	□□□□□ -0.64
HKR1-223	ENST00000591471	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.03	□□□□□ -0.64
HKR1-223	ENST00000591471	ITGAE	P38570	1179 aa		11.02	□□□□□ -0.65
HKR1-223	ENST00000591471	RRP7BP	Q9NSQ0	103 aa		11.02	□□□□□ -0.65
HKR1-223	ENST00000591471		E9PCH4	1651 aa		11.02	□□□□□ -0.65
HKR1-223	ENST00000591471	CAMSAP1	Q5T5Y3	1602 aa		11.02	□□□□□ -0.65
HKR1-223	ENST00000591471	SPHKAP	Q2M3C7	1700 aa		11.02	□□□□□ -0.65
HKR1-223	ENST00000591471	CHIC2	Q9UKJ5	165 aa		11.01	□□□□□ -0.65
HKR1-223	ENST00000591471	TRPM2	O94759	1503 aa		11.01	□□□□□ -0.65
HKR1-223	ENST00000591471	PTPRT	O14522	1441 aa		11	□□□□□ -0.65
HKR1-223	ENST00000591471	ABCC3	O15438	1527 aa		11	□□□□□ -0.65
HKR1-223	ENST00000591471	KANK1	Q14678	1352 aa		11	□□□□□ -0.65
HKR1-223	ENST00000591471	CEP152	O94986	1710 aa		10.99	□□□□□ -0.65
HKR1-223	ENST00000591471	SIGLEC1	Q9BZZ2	1709 aa		10.99	□□□□□ -0.65
HKR1-223	ENST00000591471	ANKRD30B	Q9BXX2	1392 aa		10.99	□□□□□ -0.65
HKR1-223	ENST00000591471	YEATS2	Q9ULM3	1422 aa		10.98	□□□□□ -0.65
HKR1-223	ENST00000591471	KDM5A	P29375	1690 aa	Known RBP	10.98	□□□□□ -0.65
HKR1-223	ENST00000591471	MPHOSPH9	Q99550	1183 aa		10.98	□□□□□ -0.65
HKR1-223	ENST00000591471	PIK3C2B	O00750	1634 aa		10.97	□□□□□ -0.65
HKR1-223	ENST00000591471	NUP155	O75694	1391 aa		10.96	□□□□□ -0.65
HKR1-223	ENST00000591471	CNTLN	Q9NXG0	1405 aa		10.95	□□□□□ -0.66
HKR1-223	ENST00000591471	RAPGEF3	O95398	923 aa		10.94	□□□□□ -0.66
HKR1-223	ENST00000591471	SCAF1	Q9H7N4	1312 aa	Known RBP	10.93	□□□□□ -0.66
HKR1-223	ENST00000591471	PREX1	Q8TCU6	1659 aa		10.93	□□□□□ -0.66
HKR1-223	ENST00000591471	SPATA31D1	Q6ZQQ2	1576 aa		10.93	□□□□□ -0.66
HKR1-223	ENST00000591471	NOS1	P29475	1434 aa		10.92	□□□□□ -0.66
HKR1-223	ENST00000591471	IFT172	Q9UG01	1749 aa		10.92	□□□□□ -0.66
HKR1-223	ENST00000591471	PLA2R1	Q13018	1463 aa		10.91	□□□□□ -0.66
HKR1-223	ENST00000591471	CLTC	Q00610	1675 aa	Known RBP	10.91	□□□□□ -0.66
HKR1-223	ENST00000591471	STAC3	Q96MF2	364 aa		10.9	□□□□□ -0.66
HKR1-223	ENST00000591471	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.9	□□□□□ -0.66
HKR1-223	ENST00000591471	KIF1B	O60333	1816 aa		10.9	□□□□□ -0.66
HKR1-223	ENST00000591471	ADAMTSL3	P82987	1691 aa		10.9	□□□□□ -0.66
HKR1-223	ENST00000591471	LAMC1	P11047	1609 aa		10.9	□□□□□ -0.67
HKR1-223	ENST00000591471	CLTCL1	P53675	1640 aa		10.9	□□□□□ -0.67
HKR1-223	ENST00000591471	NEUROD1	Q13562	356 aa		10.89	□□□□□ -0.67
HKR1-223	ENST00000591471	TRIM52	Q96A61	297 aa		10.89	□□□□□ -0.67
HKR1-223	ENST00000591471	KIAA1210	Q9ULL0	1709 aa		10.89	□□□□□ -0.67
HKR1-223	ENST00000591471	UHRF1BP1	Q6BDS2	1440 aa		10.89	□□□□□ -0.67
HKR1-223	ENST00000591471	FER1L4	A9Z1Z3	1794 aa		10.88	□□□□□ -0.67
HKR1-223	ENST00000591471	ADGRB3	O60242	1522 aa		10.88	□□□□□ -0.67
HKR1-223	ENST00000591471	SYNM	O15061	1565 aa		10.88	□□□□□ -0.67
HKR1-223	ENST00000591471	KIF3B	O15066	747 aa		10.88	□□□□□ -0.67
HKR1-223	ENST00000591471	MIER1	Q8N108	512 aa		10.88	□□□□□ -0.67
HKR1-223	ENST00000591471	NPAT	Q14207	1427 aa		10.87	□□□□□ -0.67
HKR1-223	ENST00000591471	PKD2	Q13563	968 aa		10.86	□□□□□ -0.67
HKR1-223	ENST00000591471	SPATA31E1	Q6ZUB1	1445 aa		10.86	□□□□□ -0.67
HKR1-223	ENST00000591471	CENPB	P07199	599 aa	Predicted RBP	10.86	□□□□□ -0.67
HKR1-223	ENST00000591471	CCDC144A	A2RUR9	1427 aa		10.86	□□□□□ -0.67
HKR1-223	ENST00000591471	TRH	P20396	242 aa	Predicted RBP	10.85	□□□□□ -0.67
HKR1-223	ENST00000591471	MYOM2	P54296	1465 aa		10.85	□□□□□ -0.67
HKR1-223	ENST00000591471	ERVK-7	P63135	1459 aa		10.85	□□□□□ -0.67
HKR1-223	ENST00000591471	C3	P01024	1663 aa		10.84	□□□□□ -0.67
HKR1-223	ENST00000591471	PPL	O60437	1756 aa		10.84	□□□□□ -0.67
HKR1-223	ENST00000591471	NRXN1	Q9ULB1	1477 aa		10.83	□□□□□ -0.68
HKR1-223	ENST00000591471	TMEM131L	A2VDJ0	1609 aa		10.83	□□□□□ -0.68
HKR1-223	ENST00000591471	ZNF142	P52746	1687 aa	Predicted RBP	10.83	□□□□□ -0.68
HKR1-223	ENST00000591471	MYT1L	Q9UL68	1186 aa		10.82	□□□□□ -0.68
HKR1-223	ENST00000591471	ZFYVE9	O95405	1425 aa		10.81	□□□□□ -0.68
HKR1-223	ENST00000591471	TRPM1	Q7Z4N2	1603 aa		10.81	□□□□□ -0.68
HKR1-223	ENST00000591471	MADD	Q8WXG6	1647 aa		10.81	□□□□□ -0.68
HKR1-223	ENST00000591471	YTHDC1	Q96MU7	727 aa	Known RBP	10.81	□□□□□ -0.68
HKR1-223	ENST00000591471	TONSL	Q96HA7	1378 aa		10.81	□□□□□ -0.68
HKR1-223	ENST00000591471	UGGT1	Q9NYU2	1555 aa		10.81	□□□□□ -0.68
HKR1-223	ENST00000591471	WASHC2C	Q9Y4E1	1318 aa		10.81	□□□□□ -0.68
HKR1-223	ENST00000591471	NLRP1	Q9C000	1473 aa		10.8	□□□□□ -0.68
HKR1-223	ENST00000591471	RPGRIP1L	Q68CZ1	1315 aa		10.8	□□□□□ -0.68
HKR1-223	ENST00000591471	SIN3A	Q96ST3	1273 aa		10.79	□□□□□ -0.68
HKR1-223	ENST00000591471	SLC52A1	Q9NWF4	448 aa		10.79	□□□□□ -0.68
HKR1-223	ENST00000591471	PPP1R15A	O75807	674 aa	Predicted RBP	10.79	□□□□□ -0.68
HKR1-223	ENST00000591471	SETBP1	Q9Y6X0	1596 aa		10.79	□□□□□ -0.68
HKR1-223	ENST00000591471	RALGAPB	Q86X10	1494 aa		10.79	□□□□□ -0.68
HKR1-223	ENST00000591471	POLR1A	O95602	1720 aa	Predicted RBP	10.78	□□□□□ -0.68
HKR1-223	ENST00000591471	UBR1	Q8IWV7	1749 aa		10.77	□□□□□ -0.68
HKR1-223	ENST00000591471	NEXMIF	Q5QGS0	1516 aa		10.77	□□□□□ -0.68
HKR1-223	ENST00000591471	ZMYM3	Q14202	1370 aa		10.76	□□□□□ -0.69
HKR1-223	ENST00000591471	MYO3A	Q8NEV4	1616 aa		10.76	□□□□□ -0.69
HKR1-223	ENST00000591471	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.76	□□□□□ -0.69	6e-6	■□□□□ 11
HKR1-223	ENST00000591471	GTF3C3	Q9Y5Q9	886 aa		10.76	□□□□□ -0.69
HKR1-223	ENST00000591471	GPRASP1	Q5JY77	1395 aa		10.76	□□□□□ -0.69
HKR1-223	ENST00000591471	PRAG1	Q86YV5	1406 aa		10.75	□□□□□ -0.69
HKR1-223	ENST00000591471	RIMS1	Q86UR5	1692 aa	Known RBP	10.75	□□□□□ -0.69
HKR1-223	ENST00000591471	GGT6	Q6P531	493 aa		10.75	□□□□□ -0.69
HKR1-223	ENST00000591471	SLIT1	O75093	1534 aa		10.74	□□□□□ -0.69
HKR1-223	ENST00000591471	IQGAP1	P46940	1657 aa		10.74	□□□□□ -0.69
HKR1-223	ENST00000591471	PELP1	Q8IZL8	1130 aa	Known RBP	10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms