RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 INO80Q9ULG1 1556 aaPredicted RBP28.52■■■□□ 2.16
GCDH-214ENST00000591043 ATP10AO60312 1499 aa28.51■■■□□ 2.15
GCDH-214ENST00000591043 RALGAPBQ86X10 1494 aa28.5■■■□□ 2.15
GCDH-214ENST00000591043 CCDC144AA2RUR9 1427 aa28.48■■■□□ 2.15
GCDH-214ENST00000591043 GTF3C3Q9Y5Q9 886 aa28.48■■■□□ 2.15
GCDH-214ENST00000591043 ATP7AQ04656 1500 aa28.47■■■□□ 2.15
GCDH-214ENST00000591043 WASHC2AQ641Q2 1341 aa28.46■■■□□ 2.15
GCDH-214ENST00000591043 DEPDC5O75140 1603 aa28.46■■■□□ 2.15
GCDH-214ENST00000591043 AEBP2Q6ZN18 517 aaPredicted RBP28.46■■■□□ 2.15
GCDH-214ENST00000591043 ADGRL1O94910 1474 aa28.46■■■□□ 2.15
GCDH-214ENST00000591043 EIF2AK4Q9P2K8 1649 aaKnown RBP28.46■■■□□ 2.15
GCDH-214ENST00000591043 CCDC7Q96M83 1385 aa28.43■■■□□ 2.14
GCDH-214ENST00000591043 CNTLNQ9NXG0 1405 aa28.42■■■□□ 2.14
GCDH-214ENST00000591043 KDM5CP41229 1560 aa28.41■■■□□ 2.14
GCDH-214ENST00000591043 ARID4BQ4LE39 1312 aaPredicted RBP28.39■■■□□ 2.14
GCDH-214ENST00000591043 SCAPERQ9BY12 1400 aa28.38■■■□□ 2.13
GCDH-214ENST00000591043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.37■■■□□ 2.13
GCDH-214ENST00000591043 PLA2R1Q13018 1463 aa28.36■■■□□ 2.13
GCDH-214ENST00000591043 USP47Q96K76 1375 aa28.36■■■□□ 2.13
GCDH-214ENST00000591043 TET3O43151 1660 aa28.35■■■□□ 2.13
GCDH-214ENST00000591043 ZNF518AQ6AHZ1 1483 aa28.34■■■□□ 2.13
GCDH-214ENST00000591043 AFAP1Q8N556 730 aa28.34■■■□□ 2.13
GCDH-214ENST00000591043 KANK1Q14678 1352 aa28.32■■■□□ 2.12
GCDH-214ENST00000591043 VWDEQ8N2E2 1590 aa28.32■■■□□ 2.12
GCDH-214ENST00000591043 LAMC1P11047 1609 aa28.32■■■□□ 2.12
GCDH-214ENST00000591043 E9PCH4 1651 aa28.31■■■□□ 2.12
GCDH-214ENST00000591043 TRPM1Q7Z4N2 1603 aa28.3■■■□□ 2.12
GCDH-214ENST00000591043 CD109Q6YHK3 1445 aa28.29■■■□□ 2.12
GCDH-214ENST00000591043 DHX29Q7Z478 1369 aaKnown RBP28.29■■■□□ 2.12
GCDH-214ENST00000591043 DCAF11Q8TEB1 546 aa28.29■■■□□ 2.12
GCDH-214ENST00000591043 PRDM15P57071 1507 aaPredicted RBP28.29■■■□□ 2.12
GCDH-214ENST00000591043 SPHKAPQ2M3C7 1700 aa28.28■■■□□ 2.12
GCDH-214ENST00000591043 KIDINS220Q9ULH0 1771 aa28.28■■■□□ 2.12
GCDH-214ENST00000591043 TRPM2O94759 1503 aa28.28■■■□□ 2.12
GCDH-214ENST00000591043 ZNF326Q5BKZ1 582 aaKnown RBP28.27■■■□□ 2.12
GCDH-214ENST00000591043 PRAG1Q86YV5 1406 aa28.27■■■□□ 2.12
GCDH-214ENST00000591043 KIF7Q2M1P5 1343 aa28.26■■■□□ 2.12
GCDH-214ENST00000591043 ROCK2O75116 1388 aaKnown RBP28.25■■■□□ 2.11
GCDH-214ENST00000591043 CEP152O94986 1710 aa28.25■■■□□ 2.11
GCDH-214ENST00000591043 CARD11Q9BXL7 1154 aa28.24■■■□□ 2.11
GCDH-214ENST00000591043 A2MP01023 1474 aa28.24■■■□□ 2.11
GCDH-214ENST00000591043 NEO1Q92859 1461 aa28.24■■■□□ 2.11
GCDH-214ENST00000591043 STAC3Q96MF2 364 aa28.24■■■□□ 2.11
GCDH-214ENST00000591043 NEURL4Q96JN8 1562 aa28.23■■■□□ 2.11
GCDH-214ENST00000591043 C11orf95C9JLR9 678 aaPredicted RBP28.23■■■□□ 2.11
GCDH-214ENST00000591043 BCORL1Q5H9F3 1711 aa28.23■■■□□ 2.11
GCDH-214ENST00000591043 PTPRTO14522 1441 aa28.23■■■□□ 2.11
GCDH-214ENST00000591043 POGZQ7Z3K3 1410 aa28.21■■■□□ 2.11
GCDH-214ENST00000591043 MLH3Q9UHC1 1453 aa28.21■■■□□ 2.11
GCDH-214ENST00000591043 RNF17Q9BXT8 1623 aaKnown RBP28.2■■■□□ 2.1
GCDH-214ENST00000591043 GPRASP1Q5JY77 1395 aa28.19■■■□□ 2.1
GCDH-214ENST00000591043 KDM2AQ9Y2K7 1162 aa28.19■■■□□ 2.1
GCDH-214ENST00000591043 HECW2Q9P2P5 1572 aa28.18■■■□□ 2.1
GCDH-214ENST00000591043 MROH1Q8NDA8 1641 aa28.18■■■□□ 2.1
GCDH-214ENST00000591043 MYT1LQ9UL68 1186 aa28.16■■■□□ 2.1
GCDH-214ENST00000591043 LMTK2Q8IWU2 1503 aa28.16■■■□□ 2.1
GCDH-214ENST00000591043 GLI2P10070 1586 aa28.13■■■□□ 2.09
GCDH-214ENST00000591043 KIF3BO15066 747 aa28.12■■■□□ 2.09
GCDH-214ENST00000591043 MAP3K4Q9Y6R4 1608 aa28.12■■■□□ 2.09
GCDH-214ENST00000591043 EFCAB6Q5THR3 1501 aa28.11■■■□□ 2.09
GCDH-214ENST00000591043 CLTCL1P53675 1640 aa28.1■■■□□ 2.09
GCDH-214ENST00000591043 PRKRIP1Q9H875 184 aaPredicted RBP28.09■■■□□ 2.09
GCDH-214ENST00000591043 RGL3Q3MIN7 710 aa28.09■■■□□ 2.09
GCDH-214ENST00000591043 KIF13AQ9H1H9 1805 aa28.07■■■□□ 2.08
GCDH-214ENST00000591043 MADDQ8WXG6 1647 aa28.05■■■□□ 2.08
GCDH-214ENST00000591043 KIF1BO60333 1816 aa28.04■■■□□ 2.08
GCDH-214ENST00000591043 KIAA1210Q9ULL0 1709 aa28.03■■■□□ 2.08
GCDH-214ENST00000591043 ST20-MTHFSA0A0A6YYL1 179 aa28.03■■■□□ 2.08
GCDH-214ENST00000591043 PPRC1Q5VV67 1664 aaKnown RBP28.01■■■□□ 2.07
GCDH-214ENST00000591043 ABCA6Q8N139 1617 aa28.01■■■□□ 2.07
GCDH-214ENST00000591043 FRMPD1Q5SYB0 1578 aa28■■■□□ 2.07
GCDH-214ENST00000591043 RICTORQ6R327 1708 aa28■■■□□ 2.07
GCDH-214ENST00000591043 KTN1Q86UP2 1357 aaKnown RBP27.99■■■□□ 2.07
GCDH-214ENST00000591043 FAM69CQ0P6D2 419 aa27.97■■■□□ 2.07
GCDH-214ENST00000591043 IQGAP1P46940 1657 aa27.95■■■□□ 2.07
GCDH-214ENST00000591043 MYOM2P54296 1465 aa27.94■■■□□ 2.06
GCDH-214ENST00000591043 COL17A1Q9UMD9 1497 aaPredicted RBP27.93■■■□□ 2.06
GCDH-214ENST00000591043 DIP2CQ9Y2E4 1556 aa27.92■■■□□ 2.06
GCDH-214ENST00000591043 IFT172Q9UG01 1749 aa27.92■■■□□ 2.06
GCDH-214ENST00000591043 ZC3H13Q5T200 1668 aaKnown RBP27.92■■■□□ 2.06
GCDH-214ENST00000591043 NBPF1Q3BBV0 1214 aa27.91■■■□□ 2.06
GCDH-214ENST00000591043 POLR3GLQ9BT43 218 aa27.88■■■□□ 2.05
GCDH-214ENST00000591043 MRS2Q9HD23 443 aa27.88■■■□□ 2.05
GCDH-214ENST00000591043 ABCC3O15438 1527 aa27.87■■■□□ 2.05
GCDH-214ENST00000591043 DIP2BQ9P265 1576 aa27.87■■■□□ 2.05
GCDH-214ENST00000591043 ZMYM4Q5VZL5 1548 aa27.87■■■□□ 2.05
GCDH-214ENST00000591043 CAMSAP1Q5T5Y3 1602 aa27.86■■■□□ 2.05
GCDH-214ENST00000591043 SCAF11Q99590 1463 aaKnown RBP27.85■■■□□ 2.05
GCDH-214ENST00000591043 ADGRB3O60242 1522 aa27.84■■■□□ 2.05
GCDH-214ENST00000591043 SLC24A1O60721 1099 aa27.84■■■□□ 2.05
GCDH-214ENST00000591043 TMF1P82094 1093 aa27.84■■■□□ 2.05
GCDH-214ENST00000591043 EIF3AQ14152 1382 aaKnown RBP27.83■■■□□ 2.05
GCDH-214ENST00000591043 HNRNPUQ00839 825 aaKnown RBP eCLIP27.83■■■□□ 2.05
GCDH-214ENST00000591043 WASHC2CQ9Y4E1 1318 aa27.82■■■□□ 2.04
GCDH-214ENST00000591043 RALBP1Q15311 655 aa27.82■■■□□ 2.04
GCDH-214ENST00000591043 TESK2Q96S53 571 aa27.82■■■□□ 2.04
GCDH-214ENST00000591043 NPATQ14207 1427 aa27.82■■■□□ 2.04
GCDH-214ENST00000591043 MROH2AA6NES4 1674 aa27.8■■■□□ 2.04
GCDH-214ENST00000591043 NRXN1Q9ULB1 1477 aa27.79■■■□□ 2.04
GCDH-214ENST00000591043 ARHGAP31Q2M1Z3 1444 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms