RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 CPS1P31327 1500 aa17.43■□□□□ 0.38
GFAP-217ENST00000590922 SCAF1Q9H7N4 1312 aaKnown RBP17.43■□□□□ 0.38
GFAP-217ENST00000590922 TNRQ92752 1358 aa17.42■□□□□ 0.38
GFAP-217ENST00000590922 TOM1O60784 492 aa17.42■□□□□ 0.38
GFAP-217ENST00000590922 NEURL4Q96JN8 1562 aa17.41■□□□□ 0.38
GFAP-217ENST00000590922 HSPA1LP34931 641 aa17.41■□□□□ 0.38
GFAP-217ENST00000590922 PIP4K2BP78356 416 aa17.41■□□□□ 0.38
GFAP-217ENST00000590922 SHANK2Q9UPX8 1470 aa17.4■□□□□ 0.38
GFAP-217ENST00000590922 FBXO31Q5XUX0 539 aaPredicted RBP17.4■□□□□ 0.38
GFAP-217ENST00000590922 FAM135AQ9P2D6 1515 aa17.4■□□□□ 0.38
GFAP-217ENST00000590922 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
GFAP-217ENST00000590922 PZPP20742 1482 aa17.39■□□□□ 0.37
GFAP-217ENST00000590922 EHBP1L1Q8N3D4 1523 aa17.39■□□□□ 0.37
GFAP-217ENST00000590922 KDM5DQ9BY66 1539 aa17.39■□□□□ 0.37
GFAP-217ENST00000590922 KIF3BO15066 747 aa17.39■□□□□ 0.37
GFAP-217ENST00000590922 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
GFAP-217ENST00000590922 ANKLE2Q86XL3 938 aa17.37■□□□□ 0.37
GFAP-217ENST00000590922 WASHC2CQ9Y4E1 1318 aa17.36■□□□□ 0.37
GFAP-217ENST00000590922 CCDC141Q6ZP82 1450 aa17.36■□□□□ 0.37
GFAP-217ENST00000590922 THEMISQ8N1K5 641 aaPredicted RBP17.35■□□□□ 0.37
GFAP-217ENST00000590922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.35■□□□□ 0.37
GFAP-217ENST00000590922 VWDEQ8N2E2 1590 aa17.34■□□□□ 0.37
GFAP-217ENST00000590922 MIA2Q96PC5 1412 aa17.34■□□□□ 0.37
GFAP-217ENST00000590922 NLRP1Q9C000 1473 aa17.34■□□□□ 0.37
GFAP-217ENST00000590922 DEPDC5O75140 1603 aa17.33■□□□□ 0.37
GFAP-217ENST00000590922 UGGT1Q9NYU2 1555 aa17.33■□□□□ 0.37
GFAP-217ENST00000590922 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.36
GFAP-217ENST00000590922 MED14O60244 1454 aa17.32■□□□□ 0.36
GFAP-217ENST00000590922 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
GFAP-217ENST00000590922 CAMSAP2Q08AD1 1489 aa17.31■□□□□ 0.36
GFAP-217ENST00000590922 IQGAP1P46940 1657 aa17.29■□□□□ 0.36
GFAP-217ENST00000590922 ALKQ9UM73 1620 aa17.29■□□□□ 0.36
GFAP-217ENST00000590922 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
GFAP-217ENST00000590922 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
GFAP-217ENST00000590922 ARHGEF5Q12774 1597 aa17.27■□□□□ 0.35
GFAP-217ENST00000590922 TSPY4P0CV99 314 aa17.26■□□□□ 0.35
GFAP-217ENST00000590922 TSPY10P0CW01 314 aa17.26■□□□□ 0.35
GFAP-217ENST00000590922 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
GFAP-217ENST00000590922 RNF17Q9BXT8 1623 aaKnown RBP17.25■□□□□ 0.35
GFAP-217ENST00000590922 ZC3H13Q5T200 1668 aaKnown RBP17.24■□□□□ 0.35
GFAP-217ENST00000590922 SYNMO15061 1565 aa17.23■□□□□ 0.35
GFAP-217ENST00000590922 LRRC7Q96NW7 1537 aa17.23■□□□□ 0.35
GFAP-217ENST00000590922 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
GFAP-217ENST00000590922 ABCC3O15438 1527 aa17.22■□□□□ 0.35
GFAP-217ENST00000590922 LRRC9Q6ZRR7 1453 aa17.22■□□□□ 0.35
GFAP-217ENST00000590922 ERVK-7P63135 1459 aa17.2■□□□□ 0.34
GFAP-217ENST00000590922 MAP3K1Q13233 1512 aa17.2■□□□□ 0.34
GFAP-217ENST00000590922 EIF2AK4Q9P2K8 1649 aaKnown RBP17.19■□□□□ 0.34
GFAP-217ENST00000590922 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
GFAP-217ENST00000590922 CFAP65Q6ZU64 1925 aaKnown RBP17.19■□□□□ 0.34
GFAP-217ENST00000590922 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
GFAP-217ENST00000590922 APLP2Q06481 763 aa17.18■□□□□ 0.34
GFAP-217ENST00000590922 UBR1Q8IWV7 1749 aa17.18■□□□□ 0.34
GFAP-217ENST00000590922 MROH1Q8NDA8 1641 aa17.16■□□□□ 0.34
GFAP-217ENST00000590922 SCAF11Q99590 1463 aaKnown RBP17.16■□□□□ 0.34
GFAP-217ENST00000590922 CEP152O94986 1710 aa17.16■□□□□ 0.34
GFAP-217ENST00000590922 SLIT1O75093 1534 aa17.12■□□□□ 0.33
GFAP-217ENST00000590922 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
GFAP-217ENST00000590922 LTKP29376 864 aa17.11■□□□□ 0.33
GFAP-217ENST00000590922 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
GFAP-217ENST00000590922 XIRP1Q702N8 1843 aaKnown RBP17.11■□□□□ 0.33
GFAP-217ENST00000590922 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
GFAP-217ENST00000590922 RGS17Q9UGC6 210 aaPredicted RBP17.09■□□□□ 0.33
GFAP-217ENST00000590922 EID1Q9Y6B2 187 aa17.09■□□□□ 0.33
GFAP-217ENST00000590922 ARHGAP31Q2M1Z3 1444 aa17.09■□□□□ 0.33
GFAP-217ENST00000590922 PRDM15P57071 1507 aaPredicted RBP17.07■□□□□ 0.32
GFAP-217ENST00000590922 MYOM3Q5VTT5 1437 aa17.07■□□□□ 0.32
GFAP-217ENST00000590922 FAM135BQ49AJ0 1406 aa17.05■□□□□ 0.32
GFAP-217ENST00000590922 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
GFAP-217ENST00000590922 PIK3C2BO00750 1634 aa17.04■□□□□ 0.32
GFAP-217ENST00000590922 ERBINQ96RT1 1412 aa17.04■□□□□ 0.32
GFAP-217ENST00000590922 KIF15Q9NS87 1388 aa17.03■□□□□ 0.32
GFAP-217ENST00000590922 KDM5AP29375 1690 aaKnown RBP17.02■□□□□ 0.32
GFAP-217ENST00000590922 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.32
GFAP-217ENST00000590922 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
GFAP-217ENST00000590922 TMEM94Q12767 1356 aa17.01■□□□□ 0.31
GFAP-217ENST00000590922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
GFAP-217ENST00000590922 RRP7BPQ9NSQ0 103 aa17■□□□□ 0.31
GFAP-217ENST00000590922 EFCAB6Q5THR3 1501 aa17■□□□□ 0.31
GFAP-217ENST00000590922 KCNA6P17658 529 aa16.99■□□□□ 0.31
GFAP-217ENST00000590922 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
GFAP-217ENST00000590922 KANK1Q14678 1352 aa16.99■□□□□ 0.31
GFAP-217ENST00000590922 ABCC5O15440 1437 aa16.98■□□□□ 0.31
GFAP-217ENST00000590922 POTEAQ6S8J7 498 aa16.98■□□□□ 0.31
GFAP-217ENST00000590922 IDI1Q13907 227 aa16.97■□□□□ 0.31
GFAP-217ENST00000590922 PROSER2Q86WR7 435 aaPredicted RBP16.97■□□□□ 0.31
GFAP-217ENST00000590922 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
GFAP-217ENST00000590922 TET3O43151 1660 aa16.97■□□□□ 0.31
GFAP-217ENST00000590922 SLC26A8Q96RN1 970 aa16.96■□□□□ 0.31
GFAP-217ENST00000590922 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.3
GFAP-217ENST00000590922 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
GFAP-217ENST00000590922 LMTK2Q8IWU2 1503 aa16.95■□□□□ 0.3
GFAP-217ENST00000590922 NKTRP30414 1462 aaKnown RBP16.94■□□□□ 0.3
GFAP-217ENST00000590922 DAPK1P53355 1430 aa16.94■□□□□ 0.3
GFAP-217ENST00000590922 RBM33Q96EV2 1170 aaKnown RBP16.93■□□□□ 0.3
GFAP-217ENST00000590922 NWD1Q149M9 1564 aa16.93■□□□□ 0.3
GFAP-217ENST00000590922 ADGRB3O60242 1522 aa16.91■□□□□ 0.3
GFAP-217ENST00000590922 MSH6P52701 1360 aa16.91■□□□□ 0.3
GFAP-217ENST00000590922 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
GFAP-217ENST00000590922 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms