RNA–Protein interactions for RNA: ENST00000590494.1

TMC6-215, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 702 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-215ENST00000590494 CDK11AQ9UQ88 783 aaPredicted RBP18.53■□□□□ 0.56
TMC6-215ENST00000590494 ITSN2Q9NZM3 1697 aa18.53■□□□□ 0.56
TMC6-215ENST00000590494 KIF14Q15058 1648 aa18.52■□□□□ 0.56
TMC6-215ENST00000590494 ABCC1P33527 1531 aa18.51■□□□□ 0.55
TMC6-215ENST00000590494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.51■□□□□ 0.554e-6■□□□□ 8.2
TMC6-215ENST00000590494 ROBO1Q9Y6N7 1651 aa18.5■□□□□ 0.55
TMC6-215ENST00000590494 CDK12Q9NYV4 1490 aaPredicted RBP18.49■□□□□ 0.55
TMC6-215ENST00000590494 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
TMC6-215ENST00000590494 SETBP1Q9Y6X0 1596 aa18.48■□□□□ 0.55
TMC6-215ENST00000590494 TROQ12816 1431 aaPredicted RBP18.48■□□□□ 0.55
TMC6-215ENST00000590494 ZNF772Q68DY9 489 aaPredicted RBP18.47■□□□□ 0.55
TMC6-215ENST00000590494 PLXNC1O60486 1568 aa18.45■□□□□ 0.54
TMC6-215ENST00000590494 TNRQ92752 1358 aa18.43■□□□□ 0.54
TMC6-215ENST00000590494 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
TMC6-215ENST00000590494 JCADQ9P266 1359 aa18.42■□□□□ 0.54
TMC6-215ENST00000590494 LRP6O75581 1613 aa18.42■□□□□ 0.54
TMC6-215ENST00000590494 RXRBP28702 533 aa18.42■□□□□ 0.54
TMC6-215ENST00000590494 THEMISQ8N1K5 641 aaPredicted RBP18.42■□□□□ 0.54
TMC6-215ENST00000590494 ZRANB1Q9UGI0 708 aa18.42■□□□□ 0.54
TMC6-215ENST00000590494 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
TMC6-215ENST00000590494 ZC3H13Q5T200 1668 aaKnown RBP18.41■□□□□ 0.54
TMC6-215ENST00000590494 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
TMC6-215ENST00000590494 EHBP1L1Q8N3D4 1523 aa18.4■□□□□ 0.54
TMC6-215ENST00000590494 UGGT1Q9NYU2 1555 aa18.4■□□□□ 0.54
TMC6-215ENST00000590494 GGT6Q6P531 493 aa18.4■□□□□ 0.54
TMC6-215ENST00000590494 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
TMC6-215ENST00000590494 PHLPP1O60346 1717 aa18.4■□□□□ 0.54
TMC6-215ENST00000590494 PREX2Q70Z35 1606 aa18.39■□□□□ 0.53
TMC6-215ENST00000590494 FAM135AQ9P2D6 1515 aa18.39■□□□□ 0.53
TMC6-215ENST00000590494 APLP2Q06481 763 aa18.37■□□□□ 0.53
TMC6-215ENST00000590494 FOXD1Q16676 465 aa18.36■□□□□ 0.53
TMC6-215ENST00000590494 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
TMC6-215ENST00000590494 KDM5DQ9BY66 1539 aa18.36■□□□□ 0.53
TMC6-215ENST00000590494 A2MP01023 1474 aa18.35■□□□□ 0.53
TMC6-215ENST00000590494 RBM33Q96EV2 1170 aaKnown RBP18.35■□□□□ 0.53
TMC6-215ENST00000590494 NLRP1Q9C000 1473 aa18.34■□□□□ 0.53
TMC6-215ENST00000590494 MEX3CQ5U5Q3 659 aaKnown RBP18.34■□□□□ 0.53
TMC6-215ENST00000590494 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.53
TMC6-215ENST00000590494 IFFO2Q5TF58 517 aa18.33■□□□□ 0.52
TMC6-215ENST00000590494 SPATA31A6Q5VVP1 1343 aa18.32■□□□□ 0.52
TMC6-215ENST00000590494 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
TMC6-215ENST00000590494 PZPP20742 1482 aa18.32■□□□□ 0.52
TMC6-215ENST00000590494 RGS12O14924 1447 aa18.32■□□□□ 0.52
TMC6-215ENST00000590494 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
TMC6-215ENST00000590494 SPAG9O60271 1321 aaKnown RBP18.3■□□□□ 0.52
TMC6-215ENST00000590494 INO80Q9ULG1 1556 aaPredicted RBP18.3■□□□□ 0.52
TMC6-215ENST00000590494 CDC42BPAQ5VT25 1732 aa18.29■□□□□ 0.52
TMC6-215ENST00000590494 MIA2Q96PC5 1412 aa18.28■□□□□ 0.52
TMC6-215ENST00000590494 LRP5O75197 1615 aa18.27■□□□□ 0.51
TMC6-215ENST00000590494 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
TMC6-215ENST00000590494 FGD6Q6ZV73 1430 aa18.26■□□□□ 0.51
TMC6-215ENST00000590494 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
TMC6-215ENST00000590494 TMEM94Q12767 1356 aa18.26■□□□□ 0.51
TMC6-215ENST00000590494 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
TMC6-215ENST00000590494 SYCP2Q9BX26 1530 aa18.24■□□□□ 0.51
TMC6-215ENST00000590494 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
TMC6-215ENST00000590494 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
TMC6-215ENST00000590494 NUTM2DQ5VT03 806 aaPredicted RBP18.24■□□□□ 0.51
TMC6-215ENST00000590494 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
TMC6-215ENST00000590494 SHPRHQ149N8 1683 aa18.24■□□□□ 0.51
TMC6-215ENST00000590494 ADGBQ8N7X0 1667 aa18.24■□□□□ 0.51
TMC6-215ENST00000590494 GPATCH8Q9UKJ3 1502 aaKnown RBP18.23■□□□□ 0.51
TMC6-215ENST00000590494 ATAD2Q6PL18 1390 aa18.21■□□□□ 0.51
TMC6-215ENST00000590494 SCAF11Q99590 1463 aaKnown RBP18.2■□□□□ 0.5
TMC6-215ENST00000590494 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
TMC6-215ENST00000590494 AFF2P51816 1311 aa18.18■□□□□ 0.5
TMC6-215ENST00000590494 RBM6P78332 1123 aaKnown RBP18.16■□□□□ 0.5
TMC6-215ENST00000590494 SLAIN2Q9P270 581 aa18.16■□□□□ 0.5
TMC6-215ENST00000590494 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMC6-215ENST00000590494 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
TMC6-215ENST00000590494 UBR1Q8IWV7 1749 aa18.14■□□□□ 0.49
TMC6-215ENST00000590494 MYOM3Q5VTT5 1437 aa18.14■□□□□ 0.49
TMC6-215ENST00000590494 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.49
TMC6-215ENST00000590494 LTKP29376 864 aa18.11■□□□□ 0.49
TMC6-215ENST00000590494 PRDM15P57071 1507 aaPredicted RBP18.11■□□□□ 0.49
TMC6-215ENST00000590494 ARHGAP23Q9P227 1491 aa18.1■□□□□ 0.49
TMC6-215ENST00000590494 MSH6P52701 1360 aa18.1■□□□□ 0.49
TMC6-215ENST00000590494 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
TMC6-215ENST00000590494 QTRT2Q9H974 415 aaKnown RBP18.1■□□□□ 0.49
TMC6-215ENST00000590494 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
TMC6-215ENST00000590494 KIAA1107Q9UPP5 1409 aa18.09■□□□□ 0.49
TMC6-215ENST00000590494 SLIT1O75093 1534 aa18.08■□□□□ 0.49
TMC6-215ENST00000590494 CAMSAP2Q08AD1 1489 aa18.08■□□□□ 0.49
TMC6-215ENST00000590494 WASHC2CQ9Y4E1 1318 aa18.08■□□□□ 0.49
TMC6-215ENST00000590494 ABCC3O15438 1527 aa18.08■□□□□ 0.48
TMC6-215ENST00000590494 KCNA6P17658 529 aa18.07■□□□□ 0.48
TMC6-215ENST00000590494 TXNDC2Q86VQ3 553 aa18.07■□□□□ 0.48
TMC6-215ENST00000590494 DIP2AQ14689 1571 aa18.07■□□□□ 0.48
TMC6-215ENST00000590494 ZNF644Q9H582 1327 aaPredicted RBP18.06■□□□□ 0.48
TMC6-215ENST00000590494 CCDC125Q86Z20 511 aa18.06■□□□□ 0.48
TMC6-215ENST00000590494 DHX29Q7Z478 1369 aaKnown RBP18.05■□□□□ 0.48
TMC6-215ENST00000590494 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
TMC6-215ENST00000590494 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
TMC6-215ENST00000590494 NKTRP30414 1462 aaKnown RBP18.05■□□□□ 0.48
TMC6-215ENST00000590494 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
TMC6-215ENST00000590494 PTPN23Q9H3S7 1636 aa18.05■□□□□ 0.48
TMC6-215ENST00000590494 YY1P25490 414 aa18.04■□□□□ 0.48
TMC6-215ENST00000590494 NHSL1Q5SYE7 1610 aa18.04■□□□□ 0.48
TMC6-215ENST00000590494 EP400Q96L91 3159 aa18.03■□□□□ 0.48
TMC6-215ENST00000590494 KIF3BO15066 747 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms