RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 FBXO31Q5XUX0 539 aaPredicted RBP28.46■■■□□ 2.15
H3F3B-209ENST00000589949 MIA2Q96PC5 1412 aa28.45■■■□□ 2.15
H3F3B-209ENST00000589949 MAST1Q9Y2H9 1570 aa28.44■■■□□ 2.14
H3F3B-209ENST00000589949 LTBP4Q8N2S1 1624 aa28.43■■■□□ 2.14
H3F3B-209ENST00000589949 KDM5DQ9BY66 1539 aa28.43■■■□□ 2.14
H3F3B-209ENST00000589949 WASHC2CQ9Y4E1 1318 aa28.4■■■□□ 2.14
H3F3B-209ENST00000589949 PZPP20742 1482 aa28.4■■■□□ 2.14
H3F3B-209ENST00000589949 PLA2R1Q13018 1463 aa28.39■■■□□ 2.13
H3F3B-209ENST00000589949 A2ML1A8K2U0 1454 aa28.38■■■□□ 2.13
H3F3B-209ENST00000589949 TCOF1Q13428 1488 aaKnown RBP28.38■■■□□ 2.13
H3F3B-209ENST00000589949 FAM135AQ9P2D6 1515 aa28.37■■■□□ 2.13
H3F3B-209ENST00000589949 TNRQ92752 1358 aa28.37■■■□□ 2.13
H3F3B-209ENST00000589949 DNMT1P26358 1616 aaKnown RBP28.36■■■□□ 2.13
H3F3B-209ENST00000589949 RNF17Q9BXT8 1623 aaKnown RBP28.34■■■□□ 2.13
H3F3B-209ENST00000589949 PKD2Q13563 968 aa28.32■■■□□ 2.12
H3F3B-209ENST00000589949 ABCC5O15440 1437 aa28.32■■■□□ 2.12
H3F3B-209ENST00000589949 MROH1Q8NDA8 1641 aa28.32■■■□□ 2.12
H3F3B-209ENST00000589949 ZNF335Q9H4Z2 1342 aaPredicted RBP28.31■■■□□ 2.12
H3F3B-209ENST00000589949 ABCC3O15438 1527 aa28.3■■■□□ 2.12
H3F3B-209ENST00000589949 APLP2Q06481 763 aa28.3■■■□□ 2.12
H3F3B-209ENST00000589949 PTPN23Q9H3S7 1636 aa28.29■■■□□ 2.12
H3F3B-209ENST00000589949 EIF2AK4Q9P2K8 1649 aaKnown RBP28.28■■■□□ 2.12
H3F3B-209ENST00000589949 FGD6Q6ZV73 1430 aa28.26■■■□□ 2.11
H3F3B-209ENST00000589949 DUOX2Q9NRD8 1548 aa28.25■■■□□ 2.11
H3F3B-209ENST00000589949 CROCC2H7BZ55 1655 aa28.25■■■□□ 2.11
H3F3B-209ENST00000589949 SHANK2Q9UPX8 1470 aa28.24■■■□□ 2.11
H3F3B-209ENST00000589949 KIF15Q9NS87 1388 aa28.24■■■□□ 2.11
H3F3B-209ENST00000589949 RRP7BPQ9NSQ0 103 aa28.23■■■□□ 2.11
H3F3B-209ENST00000589949 DAPK1P53355 1430 aa28.23■■■□□ 2.11
H3F3B-209ENST00000589949 NEURL4Q96JN8 1562 aa28.22■■■□□ 2.11
H3F3B-209ENST00000589949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.21■■■□□ 2.117e-39■□□□□ 9.5
H3F3B-209ENST00000589949 ZC3H13Q5T200 1668 aaKnown RBP28.2■■■□□ 2.11
H3F3B-209ENST00000589949 NLRP1Q9C000 1473 aa28.2■■■□□ 2.1
H3F3B-209ENST00000589949 CEP152O94986 1710 aa28.19■■■□□ 2.1
H3F3B-209ENST00000589949 IQSEC2Q5JU85 1478 aa28.19■■■□□ 2.1
H3F3B-209ENST00000589949 SPATA31D1Q6ZQQ2 1576 aa28.19■■■□□ 2.1
H3F3B-209ENST00000589949 ERVK-7P63135 1459 aa28.17■■■□□ 2.1
H3F3B-209ENST00000589949 UGGT1Q9NYU2 1555 aa28.16■■■□□ 2.1
H3F3B-209ENST00000589949 POLR1AO95602 1720 aaPredicted RBP28.16■■■□□ 2.1
H3F3B-209ENST00000589949 CHIC2Q9UKJ5 165 aa28.15■■■□□ 2.1
H3F3B-209ENST00000589949 ERBINQ96RT1 1412 aa28.15■■■□□ 2.1
H3F3B-209ENST00000589949 THEMISQ8N1K5 641 aaPredicted RBP28.14■■■□□ 2.1
H3F3B-209ENST00000589949 PRDM15P57071 1507 aaPredicted RBP28.13■■■□□ 2.09
H3F3B-209ENST00000589949 ANKLE2Q86XL3 938 aa28.12■■■□□ 2.09
H3F3B-209ENST00000589949 CFAP65Q6ZU64 1925 aaKnown RBP28.1■■■□□ 2.09
H3F3B-209ENST00000589949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.09■■■□□ 2.09
H3F3B-209ENST00000589949 DEPDC5O75140 1603 aa28.08■■■□□ 2.09
H3F3B-209ENST00000589949 ARHGAP31Q2M1Z3 1444 aa28.07■■■□□ 2.08
H3F3B-209ENST00000589949 MED14O60244 1454 aa28.07■■■□□ 2.08
H3F3B-209ENST00000589949 ANKRD30AQ9BXX3 1397 aa28.06■■■□□ 2.08
H3F3B-209ENST00000589949 NPHP4O75161 1426 aaPredicted RBP28.05■■■□□ 2.08
H3F3B-209ENST00000589949 VWDEQ8N2E2 1590 aa28.03■■■□□ 2.08
H3F3B-209ENST00000589949 UBAP1LF5GYI3 381 aa28.03■■■□□ 2.08
H3F3B-209ENST00000589949 FAM50AQ14320 339 aaKnown RBP28.02■■■□□ 2.08
H3F3B-209ENST00000589949 UBR1Q8IWV7 1749 aa28.01■■■□□ 2.07
H3F3B-209ENST00000589949 ADGRL2O95490 1459 aa28.01■■■□□ 2.07
H3F3B-209ENST00000589949 IQGAP1P46940 1657 aa27.97■■■□□ 2.07
H3F3B-209ENST00000589949 CPS1P31327 1500 aa27.97■■■□□ 2.07
H3F3B-209ENST00000589949 LMTK2Q8IWU2 1503 aa27.97■■■□□ 2.07
H3F3B-209ENST00000589949 KANK1Q14678 1352 aa27.96■■■□□ 2.07
H3F3B-209ENST00000589949 LTKP29376 864 aa27.95■■■□□ 2.06
H3F3B-209ENST00000589949 ARHGAP23Q9P227 1491 aa27.94■■■□□ 2.06
H3F3B-209ENST00000589949 STRCP1A6NGW2 1772 aa27.92■■■□□ 2.06
H3F3B-209ENST00000589949 PIK3C2BO00750 1634 aa27.92■■■□□ 2.06
H3F3B-209ENST00000589949 SLIT1O75093 1534 aa27.92■■■□□ 2.06
H3F3B-209ENST00000589949 SCAF11Q99590 1463 aaKnown RBP27.91■■■□□ 2.06
H3F3B-209ENST00000589949 SYNMO15061 1565 aa27.9■■■□□ 2.06
H3F3B-209ENST00000589949 DISP3Q9P2K9 1392 aa27.89■■■□□ 2.06
H3F3B-209ENST00000589949 IDI1Q13907 227 aa27.89■■■□□ 2.06
H3F3B-209ENST00000589949 ANKRD50Q9ULJ7 1429 aa27.89■■■□□ 2.06
H3F3B-209ENST00000589949 TXNDC2Q86VQ3 553 aa27.88■■■□□ 2.05
H3F3B-209ENST00000589949 EFCAB6Q5THR3 1501 aa27.87■■■□□ 2.05
H3F3B-209ENST00000589949 NOS1P29475 1434 aa27.87■■■□□ 2.05
H3F3B-209ENST00000589949 ALKQ9UM73 1620 aa27.86■■■□□ 2.05
H3F3B-209ENST00000589949 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
H3F3B-209ENST00000589949 ILDR2Q71H61 639 aa27.85■■■□□ 2.05
H3F3B-209ENST00000589949 TMEM2Q9UHN6 1383 aa27.85■■■□□ 2.05
H3F3B-209ENST00000589949 LRRC7Q96NW7 1537 aa27.83■■■□□ 2.05
H3F3B-209ENST00000589949 PIP4K2BP78356 416 aa27.83■■■□□ 2.05
H3F3B-209ENST00000589949 SCAF1Q9H7N4 1312 aaKnown RBP27.79■■■□□ 2.04
H3F3B-209ENST00000589949 TOM1O60784 492 aa27.79■■■□□ 2.04
H3F3B-209ENST00000589949 HSPA1LP34931 641 aa27.78■■■□□ 2.04
H3F3B-209ENST00000589949 STAG3Q9UJ98 1225 aa27.78■■■□□ 2.04
H3F3B-209ENST00000589949 EID1Q9Y6B2 187 aa27.78■■■□□ 2.04
H3F3B-209ENST00000589949 KDM5AP29375 1690 aaKnown RBP27.78■■■□□ 2.04
H3F3B-209ENST00000589949 ROCK1Q13464 1354 aa27.75■■■□□ 2.03
H3F3B-209ENST00000589949 UNC13BO14795 1591 aa27.74■■■□□ 2.03
H3F3B-209ENST00000589949 RPRD2Q5VT52 1461 aaKnown RBP27.74■■■□□ 2.03
H3F3B-209ENST00000589949 ADGRB3O60242 1522 aa27.73■■■□□ 2.03
H3F3B-209ENST00000589949 TET3O43151 1660 aa27.73■■■□□ 2.03
H3F3B-209ENST00000589949 SLC52A1Q9NWF4 448 aa27.72■■■□□ 2.03
H3F3B-209ENST00000589949 ITGAEP38570 1179 aa27.71■■■□□ 2.03
H3F3B-209ENST00000589949 XIRP1Q702N8 1843 aaKnown RBP27.67■■■□□ 2.02
H3F3B-209ENST00000589949 SLC26A8Q96RN1 970 aa27.67■■■□□ 2.02
H3F3B-209ENST00000589949 GCC2Q8IWJ2 1684 aa27.66■■■□□ 2.02
H3F3B-209ENST00000589949 E9PCH4 1651 aa27.65■■■□□ 2.02
H3F3B-209ENST00000589949 MYO5BQ9ULV0 1848 aa27.64■■■□□ 2.02
H3F3B-209ENST00000589949 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
H3F3B-209ENST00000589949 ZFYVE9O95405 1425 aa27.64■■■□□ 2.02
H3F3B-209ENST00000589949 TMEM131LA2VDJ0 1609 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms