RNA–Protein interactions for RNA: ENST00000589872.1

NBR1-205, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBR1, Length 3,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-205ENST00000589872 SLC4A3P48751 1232 aa16.42■□□□□ 0.22
NBR1-205ENST00000589872 GSE1Q14687 1217 aa16.42■□□□□ 0.22
NBR1-205ENST00000589872 CDK13Q14004 1512 aaKnown RBP16.42■□□□□ 0.22
NBR1-205ENST00000589872 MBD5Q9P267 1494 aa16.41■□□□□ 0.22
NBR1-205ENST00000589872 KDM5CP41229 1560 aa16.41■□□□□ 0.22
NBR1-205ENST00000589872 PLIN1O60240 522 aa16.41■□□□□ 0.22
NBR1-205ENST00000589872 DAPK1P53355 1430 aa16.41■□□□□ 0.22
NBR1-205ENST00000589872 NFKBIBQ15653 356 aa16.4■□□□□ 0.22
NBR1-205ENST00000589872 ZNF644Q9H582 1327 aaPredicted RBP16.4■□□□□ 0.22
NBR1-205ENST00000589872 PPRC1Q5VV67 1664 aaKnown RBP16.4■□□□□ 0.22
NBR1-205ENST00000589872 CDCA7LQ96GN5 454 aa16.39■□□□□ 0.22
NBR1-205ENST00000589872 EPRSP07814 1512 aaKnown RBP16.39■□□□□ 0.21
NBR1-205ENST00000589872 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
NBR1-205ENST00000589872 ABCC5O15440 1437 aa16.38■□□□□ 0.21
NBR1-205ENST00000589872 KIF15Q9NS87 1388 aa16.38■□□□□ 0.21
NBR1-205ENST00000589872 PZPP20742 1482 aa16.38■□□□□ 0.21
NBR1-205ENST00000589872 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
NBR1-205ENST00000589872 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
NBR1-205ENST00000589872 MYBBP1AQ9BQG0 1328 aaKnown RBP16.37■□□□□ 0.21
NBR1-205ENST00000589872 ARID4BQ4LE39 1312 aaPredicted RBP16.36■□□□□ 0.21
NBR1-205ENST00000589872 RAPGEF6Q8TEU7 1601 aa16.36■□□□□ 0.21
NBR1-205ENST00000589872 UBE2Q2Q8WVN8 375 aa16.35■□□□□ 0.21
NBR1-205ENST00000589872 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
NBR1-205ENST00000589872 KIF14Q15058 1648 aa16.35■□□□□ 0.21
NBR1-205ENST00000589872 CRBNQ96SW2 442 aa16.35■□□□□ 0.21
NBR1-205ENST00000589872 ARAP3Q8WWN8 1544 aa16.35■□□□□ 0.21
NBR1-205ENST00000589872 DNMT1P26358 1616 aaKnown RBP16.34■□□□□ 0.21
NBR1-205ENST00000589872 ROCK2O75116 1388 aaKnown RBP16.34■□□□□ 0.21
NBR1-205ENST00000589872 CFAP74Q9C0B2 1584 aa16.33■□□□□ 0.21
NBR1-205ENST00000589872 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.21
NBR1-205ENST00000589872 PTPRGP23470 1445 aa16.33■□□□□ 0.2
NBR1-205ENST00000589872 ABCA9Q8IUA7 1624 aa16.33■□□□□ 0.2
NBR1-205ENST00000589872 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
NBR1-205ENST00000589872 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
NBR1-205ENST00000589872 RALBP1Q15311 655 aa16.31■□□□□ 0.2
NBR1-205ENST00000589872 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
NBR1-205ENST00000589872 PKD2Q13563 968 aa16.3■□□□□ 0.2
NBR1-205ENST00000589872 FBLN2P98095 1184 aa16.29■□□□□ 0.2
NBR1-205ENST00000589872 C20orf194Q5TEA3 1177 aa16.29■□□□□ 0.2
NBR1-205ENST00000589872 KIAA1107Q9UPP5 1409 aa16.29■□□□□ 0.2
NBR1-205ENST00000589872 RALGAPBQ86X10 1494 aa16.27■□□□□ 0.19
NBR1-205ENST00000589872 FRAT2O75474 233 aaPredicted RBP16.27■□□□□ 0.19
NBR1-205ENST00000589872 E9PCH4 1651 aa16.26■□□□□ 0.19
NBR1-205ENST00000589872 KDM2AQ9Y2K7 1162 aa16.26■□□□□ 0.19
NBR1-205ENST00000589872 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
NBR1-205ENST00000589872 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
NBR1-205ENST00000589872 DAXXQ9UER7 740 aaPredicted RBP16.25■□□□□ 0.19
NBR1-205ENST00000589872 UHRF1BP1Q6BDS2 1440 aa16.24■□□□□ 0.19
NBR1-205ENST00000589872 DCAF11Q8TEB1 546 aa16.24■□□□□ 0.19
NBR1-205ENST00000589872 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
NBR1-205ENST00000589872 KDM2BQ8NHM5 1336 aa16.23■□□□□ 0.19
NBR1-205ENST00000589872 PARD3Q8TEW0 1356 aa16.23■□□□□ 0.19
NBR1-205ENST00000589872 C8orf34Q49A92 452 aa16.22■□□□□ 0.19
NBR1-205ENST00000589872 FAM161AQ3B820 660 aa16.2■□□□□ 0.18
NBR1-205ENST00000589872 CC2D1BQ5T0F9 858 aaKnown RBP16.18■□□□□ 0.18
NBR1-205ENST00000589872 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
NBR1-205ENST00000589872 CYB5RLQ6IPT4 315 aa16.17■□□□□ 0.18
NBR1-205ENST00000589872 ASXL2Q76L83 1435 aa16.17■□□□□ 0.18
NBR1-205ENST00000589872 ZNF777Q9ULD5 760 aaPredicted RBP16.17■□□□□ 0.18
NBR1-205ENST00000589872 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
NBR1-205ENST00000589872 BLMP54132 1417 aaPredicted RBP16.16■□□□□ 0.18
NBR1-205ENST00000589872 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
NBR1-205ENST00000589872 RGS3P49796 1198 aa16.16■□□□□ 0.18
NBR1-205ENST00000589872 CENPQQ7L2Z9 268 aaPredicted RBP16.16■□□□□ 0.18
NBR1-205ENST00000589872 ADGBQ8N7X0 1667 aa16.16■□□□□ 0.18
NBR1-205ENST00000589872 NEO1Q92859 1461 aa16.15■□□□□ 0.18
NBR1-205ENST00000589872 CFDP1Q9UEE9 299 aaPredicted RBP16.14■□□□□ 0.17
NBR1-205ENST00000589872 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
NBR1-205ENST00000589872 ARHGEF12Q9NZN5 1544 aa16.13■□□□□ 0.17
NBR1-205ENST00000589872 ZMYM4Q5VZL5 1548 aa16.12■□□□□ 0.17
NBR1-205ENST00000589872 NUP155O75694 1391 aa16.12■□□□□ 0.17
NBR1-205ENST00000589872 NUP153P49790 1475 aaKnown RBP16.12■□□□□ 0.17
NBR1-205ENST00000589872 POGKQ9P215 609 aa16.12■□□□□ 0.17
NBR1-205ENST00000589872 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
NBR1-205ENST00000589872 ATP10BO94823 1461 aa16.1■□□□□ 0.17
NBR1-205ENST00000589872 ADGRL2O95490 1459 aa16.1■□□□□ 0.17
NBR1-205ENST00000589872 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
NBR1-205ENST00000589872 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
NBR1-205ENST00000589872 REREQ9P2R6 1566 aa16.09■□□□□ 0.17
NBR1-205ENST00000589872 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.17
NBR1-205ENST00000589872 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.17
NBR1-205ENST00000589872 RRAGDQ9NQL2 400 aaPredicted RBP16.08■□□□□ 0.17
NBR1-205ENST00000589872 ANKRD30AQ9BXX3 1397 aa16.08■□□□□ 0.17
NBR1-205ENST00000589872 PLEKHH1Q9ULM0 1364 aa16.08■□□□□ 0.17
NBR1-205ENST00000589872 PANK3Q9H999 370 aa16.08■□□□□ 0.16
NBR1-205ENST00000589872 GPATCH8Q9UKJ3 1502 aaKnown RBP16.06■□□□□ 0.16
NBR1-205ENST00000589872 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
NBR1-205ENST00000589872 USP19O94966 1318 aa16.06■□□□□ 0.16
NBR1-205ENST00000589872 NPM1P06748 294 aaKnown RBP eCLIP16.06■□□□□ 0.16
NBR1-205ENST00000589872 PLEKHH2Q8IVE3 1493 aa16.06■□□□□ 0.16
NBR1-205ENST00000589872 INSRP06213 1382 aa16.06■□□□□ 0.16
NBR1-205ENST00000589872 MYO5CQ9NQX4 1742 aa16.04■□□□□ 0.16
NBR1-205ENST00000589872 TRPM1Q7Z4N2 1603 aa16.04■□□□□ 0.16
NBR1-205ENST00000589872 SEC24BO95487 1268 aa16.03■□□□□ 0.16
NBR1-205ENST00000589872 TROQ12816 1431 aaPredicted RBP16.03■□□□□ 0.16
NBR1-205ENST00000589872 KDM5DQ9BY66 1539 aa16.03■□□□□ 0.16
NBR1-205ENST00000589872 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
NBR1-205ENST00000589872 SLKQ9H2G2 1235 aaPredicted RBP16.03■□□□□ 0.16
NBR1-205ENST00000589872 RGL3Q3MIN7 710 aa16.02■□□□□ 0.16
NBR1-205ENST00000589872 TESK2Q96S53 571 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms