RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 MADDQ8WXG6 1647 aa16.11■□□□□ 0.17
SDF2-208ENST00000589788 REREQ9P2R6 1566 aa16.11■□□□□ 0.17
SDF2-208ENST00000589788 INO80Q9ULG1 1556 aaPredicted RBP16.11■□□□□ 0.17
SDF2-208ENST00000589788 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
SDF2-208ENST00000589788 RSPH4AQ5TD94 716 aa16.1■□□□□ 0.17
SDF2-208ENST00000589788 CCDC141Q6ZP82 1450 aa16.1■□□□□ 0.17
SDF2-208ENST00000589788 RIMS1Q86UR5 1692 aaKnown RBP16.09■□□□□ 0.17
SDF2-208ENST00000589788 VASPP50552 380 aaPredicted RBP16.08■□□□□ 0.16
SDF2-208ENST00000589788 PTPRMP28827 1452 aa16.08■□□□□ 0.16
SDF2-208ENST00000589788 FER1L4A9Z1Z3 1794 aa16.07■□□□□ 0.16
SDF2-208ENST00000589788 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
SDF2-208ENST00000589788 AGLP35573 1532 aa16.06■□□□□ 0.16
SDF2-208ENST00000589788 RTEL1-TNFRSF6BF6WH68 1400 aa16.06■□□□□ 0.16
SDF2-208ENST00000589788 TSPY4P0CV99 314 aa16.05■□□□□ 0.16
SDF2-208ENST00000589788 TSPY10P0CW01 314 aa16.05■□□□□ 0.16
SDF2-208ENST00000589788 ADGBQ8N7X0 1667 aa16.05■□□□□ 0.16
SDF2-208ENST00000589788 PTPN23Q9H3S7 1636 aa16.04■□□□□ 0.16
SDF2-208ENST00000589788 A2MP01023 1474 aa16.04■□□□□ 0.16
SDF2-208ENST00000589788 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
SDF2-208ENST00000589788 ESF1Q9H501 851 aaKnown RBP16.02■□□□□ 0.16
SDF2-208ENST00000589788 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
SDF2-208ENST00000589788 PLXNC1O60486 1568 aa16■□□□□ 0.15
SDF2-208ENST00000589788 SSUH2Q9Y2M2 353 aa15.99■□□□□ 0.15
SDF2-208ENST00000589788 MAST1Q9Y2H9 1570 aa15.98■□□□□ 0.15
SDF2-208ENST00000589788 TCOF1Q13428 1488 aaKnown RBP15.98■□□□□ 0.15
SDF2-208ENST00000589788 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
SDF2-208ENST00000589788 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
SDF2-208ENST00000589788 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
SDF2-208ENST00000589788 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
SDF2-208ENST00000589788 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
SDF2-208ENST00000589788 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
SDF2-208ENST00000589788 CROCC2H7BZ55 1655 aa15.96■□□□□ 0.15
SDF2-208ENST00000589788 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
SDF2-208ENST00000589788 DNMT1P26358 1616 aaKnown RBP15.95■□□□□ 0.14
SDF2-208ENST00000589788 ABCC5O15440 1437 aa15.95■□□□□ 0.14
SDF2-208ENST00000589788 CNTLNQ9NXG0 1405 aa15.95■□□□□ 0.14
SDF2-208ENST00000589788 GGT6Q6P531 493 aa15.94■□□□□ 0.14
SDF2-208ENST00000589788 SHANK2Q9UPX8 1470 aa15.94■□□□□ 0.14
SDF2-208ENST00000589788 DAPK1P53355 1430 aa15.94■□□□□ 0.14
SDF2-208ENST00000589788 KIF3BO15066 747 aa15.94■□□□□ 0.14
SDF2-208ENST00000589788 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
SDF2-208ENST00000589788 CEBPAP49715 358 aaPredicted RBP15.93■□□□□ 0.14
SDF2-208ENST00000589788 C3P01024 1663 aa15.91■□□□□ 0.14
SDF2-208ENST00000589788 MROH2AA6NES4 1674 aa15.9■□□□□ 0.14
SDF2-208ENST00000589788 CLTCQ00610 1675 aaKnown RBP15.9■□□□□ 0.14
SDF2-208ENST00000589788 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
SDF2-208ENST00000589788 CHIC2Q9UKJ5 165 aa15.89■□□□□ 0.13
SDF2-208ENST00000589788 KIF15Q9NS87 1388 aa15.88■□□□□ 0.13
SDF2-208ENST00000589788 RRP7BPQ9NSQ0 103 aa15.88■□□□□ 0.13
SDF2-208ENST00000589788 ANKRD30AQ9BXX3 1397 aa15.87■□□□□ 0.13
SDF2-208ENST00000589788 EIF2AK4Q9P2K8 1649 aaKnown RBP15.87■□□□□ 0.13
SDF2-208ENST00000589788 ZMYM3Q14202 1370 aa15.86■□□□□ 0.13
SDF2-208ENST00000589788 LMTK3Q96Q04 1460 aa15.86■□□□□ 0.13
SDF2-208ENST00000589788 SETD1BQ9UPS6 1966 aaKnown RBP15.86■□□□□ 0.13
SDF2-208ENST00000589788 PREX1Q8TCU6 1659 aa15.86■□□□□ 0.13
SDF2-208ENST00000589788 WASHC2CQ9Y4E1 1318 aa15.84■□□□□ 0.13
SDF2-208ENST00000589788 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
SDF2-208ENST00000589788 FAM135AQ9P2D6 1515 aa15.84■□□□□ 0.13
SDF2-208ENST00000589788 RNF17Q9BXT8 1623 aaKnown RBP15.84■□□□□ 0.13
SDF2-208ENST00000589788 ERBINQ96RT1 1412 aa15.83■□□□□ 0.13
SDF2-208ENST00000589788 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
SDF2-208ENST00000589788 NCOA1Q15788 1441 aa15.82■□□□□ 0.12
SDF2-208ENST00000589788 UHRF1BP1Q6BDS2 1440 aa15.82■□□□□ 0.12
SDF2-208ENST00000589788 ADGRL2O95490 1459 aa15.82■□□□□ 0.12
SDF2-208ENST00000589788 NPATQ14207 1427 aa15.82■□□□□ 0.12
SDF2-208ENST00000589788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.8■□□□□ 0.12
SDF2-208ENST00000589788 ITGAEP38570 1179 aa15.8■□□□□ 0.12
SDF2-208ENST00000589788 HSPA2P54652 639 aa15.8■□□□□ 0.12
SDF2-208ENST00000589788 ZC3H13Q5T200 1668 aaKnown RBP15.79■□□□□ 0.12
SDF2-208ENST00000589788 PTPRKQ15262 1439 aa15.78■□□□□ 0.12
SDF2-208ENST00000589788 MROH1Q8NDA8 1641 aa15.77■□□□□ 0.12
SDF2-208ENST00000589788 ABCC3O15438 1527 aa15.77■□□□□ 0.11
SDF2-208ENST00000589788 RRBP1Q9P2E9 1410 aaKnown RBP15.76■□□□□ 0.11
SDF2-208ENST00000589788 PZPP20742 1482 aa15.76■□□□□ 0.11
SDF2-208ENST00000589788 CEP152O94986 1710 aa15.76■□□□□ 0.11
SDF2-208ENST00000589788 PRDM15P57071 1507 aaPredicted RBP15.76■□□□□ 0.11
SDF2-208ENST00000589788 KANK1Q14678 1352 aa15.76■□□□□ 0.11
SDF2-208ENST00000589788 DEPDC5O75140 1603 aa15.75■□□□□ 0.11
SDF2-208ENST00000589788 ROCK1Q13464 1354 aa15.75■□□□□ 0.11
SDF2-208ENST00000589788 ANKRD50Q9ULJ7 1429 aa15.75■□□□□ 0.11
SDF2-208ENST00000589788 MYO3AQ8NEV4 1616 aa15.73■□□□□ 0.11
SDF2-208ENST00000589788 CAMSAP1Q5T5Y3 1602 aa15.73■□□□□ 0.11
SDF2-208ENST00000589788 FBXO31Q5XUX0 539 aaPredicted RBP15.72■□□□□ 0.11
SDF2-208ENST00000589788 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
SDF2-208ENST00000589788 TNRQ92752 1358 aa15.71■□□□□ 0.11
SDF2-208ENST00000589788 ZNF142P52746 1687 aaPredicted RBP15.7■□□□□ 0.1
SDF2-208ENST00000589788 CEP170BQ9Y4F5 1589 aaPredicted RBP15.7■□□□□ 0.1
SDF2-208ENST00000589788 CFAP65Q6ZU64 1925 aaKnown RBP15.69■□□□□ 0.1
SDF2-208ENST00000589788 VWDEQ8N2E2 1590 aa15.67■□□□□ 0.1
SDF2-208ENST00000589788 A2ML1A8K2U0 1454 aa15.67■□□□□ 0.1
SDF2-208ENST00000589788 ERVK-7P63135 1459 aa15.66■□□□□ 0.1
SDF2-208ENST00000589788 ARHGAP31Q2M1Z3 1444 aa15.66■□□□□ 0.1
SDF2-208ENST00000589788 SPATA31D1Q6ZQQ2 1576 aa15.66■□□□□ 0.1
SDF2-208ENST00000589788 LMTK2Q8IWU2 1503 aa15.66■□□□□ 0.1
SDF2-208ENST00000589788 STRCQ7RTU9 1775 aa15.66■□□□□ 0.1
SDF2-208ENST00000589788 NLRP1Q9C000 1473 aa15.65■□□□□ 0.1
SDF2-208ENST00000589788 UNC13BO14795 1591 aa15.65■□□□□ 0.1
SDF2-208ENST00000589788 PKD2Q13563 968 aa15.64■□□□□ 0.09
SDF2-208ENST00000589788 EFCAB6Q5THR3 1501 aa15.62■□□□□ 0.09
SDF2-208ENST00000589788 PLA2R1Q13018 1463 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms