RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 MYOM3Q5VTT5 1437 aa37.74■■■■□ 3.63
LSM7-205ENST00000589532 MIA2Q96PC5 1412 aa37.73■■■■□ 3.63
LSM7-205ENST00000589532 TCOF1Q13428 1488 aaKnown RBP37.72■■■■□ 3.63
LSM7-205ENST00000589532 RNF17Q9BXT8 1623 aaKnown RBP37.72■■■■□ 3.63
LSM7-205ENST00000589532 PZPP20742 1482 aa37.71■■■■□ 3.63
LSM7-205ENST00000589532 KIF3BO15066 747 aa37.68■■■■□ 3.62
LSM7-205ENST00000589532 A2ML1A8K2U0 1454 aa37.68■■■■□ 3.62
LSM7-205ENST00000589532 DNMT1P26358 1616 aaKnown RBP37.67■■■■□ 3.62
LSM7-205ENST00000589532 EIF2AK4Q9P2K8 1649 aaKnown RBP37.66■■■■□ 3.62
LSM7-205ENST00000589532 MROH1Q8NDA8 1641 aa37.62■■■■□ 3.61
LSM7-205ENST00000589532 TSPY4P0CV99 314 aa37.61■■■■□ 3.61
LSM7-205ENST00000589532 TSPY10P0CW01 314 aa37.61■■■■□ 3.61
LSM7-205ENST00000589532 ZC3H13Q5T200 1668 aaKnown RBP37.6■■■■□ 3.61
LSM7-205ENST00000589532 IQSEC2Q5JU85 1478 aa37.6■■■■□ 3.61
LSM7-205ENST00000589532 CROCC2H7BZ55 1655 aa37.6■■■■□ 3.61
LSM7-205ENST00000589532 NCKAP5LQ9HCH0 1330 aa37.58■■■■□ 3.61
LSM7-205ENST00000589532 TNRQ92752 1358 aa37.57■■■■□ 3.61
LSM7-205ENST00000589532 ABCC3O15438 1527 aa37.56■■■■□ 3.6
LSM7-205ENST00000589532 SHANK2Q9UPX8 1470 aa37.54■■■■□ 3.6
LSM7-205ENST00000589532 PKD2Q13563 968 aa37.54■■■■□ 3.6
LSM7-205ENST00000589532 POLR1AO95602 1720 aaPredicted RBP37.53■■■■□ 3.6
LSM7-205ENST00000589532 FBXO31Q5XUX0 539 aaPredicted RBP37.53■■■■□ 3.6
LSM7-205ENST00000589532 PTPN23Q9H3S7 1636 aa37.53■■■■□ 3.6
LSM7-205ENST00000589532 NEURL4Q96JN8 1562 aa37.52■■■■□ 3.6
LSM7-205ENST00000589532 WASHC2CQ9Y4E1 1318 aa37.52■■■■□ 3.6
LSM7-205ENST00000589532 DUOX2Q9NRD8 1548 aa37.5■■■■□ 3.59
LSM7-205ENST00000589532 SPATA31D1Q6ZQQ2 1576 aa37.47■■■■□ 3.59
LSM7-205ENST00000589532 NLRP1Q9C000 1473 aa37.47■■■■□ 3.59
LSM7-205ENST00000589532 ABCC5O15440 1437 aa37.45■■■■□ 3.59
LSM7-205ENST00000589532 CEP152O94986 1710 aa37.44■■■■□ 3.58
LSM7-205ENST00000589532 ZNF335Q9H4Z2 1342 aaPredicted RBP37.44■■■■□ 3.58
LSM7-205ENST00000589532 PRDM15P57071 1507 aaPredicted RBP37.44■■■■□ 3.58
LSM7-205ENST00000589532 FGD6Q6ZV73 1430 aa37.42■■■■□ 3.58
LSM7-205ENST00000589532 ERVK-7P63135 1459 aa37.39■■■■□ 3.58
LSM7-205ENST00000589532 UGGT1Q9NYU2 1555 aa37.38■■■■□ 3.58
LSM7-205ENST00000589532 DAPK1P53355 1430 aa37.38■■■■□ 3.57
LSM7-205ENST00000589532 DEPDC5O75140 1603 aa37.38■■■■□ 3.57
LSM7-205ENST00000589532 KIF15Q9NS87 1388 aa37.38■■■■□ 3.57
LSM7-205ENST00000589532 ERBINQ96RT1 1412 aa37.37■■■■□ 3.57
LSM7-205ENST00000589532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.31■■■■□ 3.56
LSM7-205ENST00000589532 APLP2Q06481 763 aa37.3■■■■□ 3.56
LSM7-205ENST00000589532 MED14O60244 1454 aa37.3■■■■□ 3.56
LSM7-205ENST00000589532 ARHGAP31Q2M1Z3 1444 aa37.27■■■■□ 3.56
LSM7-205ENST00000589532 VWDEQ8N2E2 1590 aa37.25■■■■□ 3.55
LSM7-205ENST00000589532 UBR1Q8IWV7 1749 aa37.24■■■■□ 3.55
LSM7-205ENST00000589532 THEMISQ8N1K5 641 aaPredicted RBP37.22■■■■□ 3.55
LSM7-205ENST00000589532 CPS1P31327 1500 aa37.21■■■■□ 3.55
LSM7-205ENST00000589532 IQGAP1P46940 1657 aa37.21■■■■□ 3.55
LSM7-205ENST00000589532 NPHP4O75161 1426 aaPredicted RBP37.19■■■■□ 3.54
LSM7-205ENST00000589532 ADGRL2O95490 1459 aa37.19■■■■□ 3.54
LSM7-205ENST00000589532 RRP7BPQ9NSQ0 103 aa37.18■■■■□ 3.54
LSM7-205ENST00000589532 LMTK2Q8IWU2 1503 aa37.18■■■■□ 3.54
LSM7-205ENST00000589532 ANKLE2Q86XL3 938 aa37.17■■■■□ 3.54
LSM7-205ENST00000589532 CFAP65Q6ZU64 1925 aaKnown RBP37.16■■■■□ 3.54
LSM7-205ENST00000589532 ANKRD30AQ9BXX3 1397 aa37.14■■■■□ 3.54
LSM7-205ENST00000589532 ARHGAP23Q9P227 1491 aa37.11■■■■□ 3.53
LSM7-205ENST00000589532 SLIT1O75093 1534 aa37.1■■■■□ 3.53
LSM7-205ENST00000589532 PIK3C2BO00750 1634 aa37.07■■■■□ 3.53
LSM7-205ENST00000589532 STRCP1A6NGW2 1772 aa37.07■■■■□ 3.53
LSM7-205ENST00000589532 UBAP1LF5GYI3 381 aa37.07■■■■□ 3.52
LSM7-205ENST00000589532 EFCAB6Q5THR3 1501 aa37.05■■■■□ 3.52
LSM7-205ENST00000589532 CHIC2Q9UKJ5 165 aa37.04■■■■□ 3.52
LSM7-205ENST00000589532 KDM5AP29375 1690 aaKnown RBP37.03■■■■□ 3.52
LSM7-205ENST00000589532 SCAF11Q99590 1463 aaKnown RBP37.03■■■■□ 3.52
LSM7-205ENST00000589532 SYNMO15061 1565 aa37.03■■■■□ 3.52
LSM7-205ENST00000589532 KANK1Q14678 1352 aa37.02■■■■□ 3.52
LSM7-205ENST00000589532 ALKQ9UM73 1620 aa37.01■■■■□ 3.52
LSM7-205ENST00000589532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.98■■■■□ 3.518e-8■□□□□ 9.7
LSM7-205ENST00000589532 DISP3Q9P2K9 1392 aa36.97■■■■□ 3.51
LSM7-205ENST00000589532 NOS1P29475 1434 aa36.95■■■■□ 3.51
LSM7-205ENST00000589532 LRRC7Q96NW7 1537 aa36.92■■■■□ 3.5
LSM7-205ENST00000589532 ANKRD50Q9ULJ7 1429 aa36.92■■■■□ 3.5
LSM7-205ENST00000589532 LTKP29376 864 aa36.91■■■■□ 3.5
LSM7-205ENST00000589532 UNC13BO14795 1591 aa36.89■■■■□ 3.5
LSM7-205ENST00000589532 FAM50AQ14320 339 aaKnown RBP36.89■■■■□ 3.5
LSM7-205ENST00000589532 TMEM2Q9UHN6 1383 aa36.89■■■■□ 3.5
LSM7-205ENST00000589532 ADGRB3O60242 1522 aa36.88■■■■□ 3.49
LSM7-205ENST00000589532 TET3O43151 1660 aa36.86■■■■□ 3.49
LSM7-205ENST00000589532 RPRD2Q5VT52 1461 aaKnown RBP36.86■■■■□ 3.49
LSM7-205ENST00000589532 ILDR2Q71H61 639 aa36.82■■■■□ 3.48
LSM7-205ENST00000589532 GCC2Q8IWJ2 1684 aa36.8■■■■□ 3.48
LSM7-205ENST00000589532 TOM1O60784 492 aa36.8■■■■□ 3.48
LSM7-205ENST00000589532 IDI1Q13907 227 aa36.8■■■■□ 3.48
LSM7-205ENST00000589532 TXNDC2Q86VQ3 553 aa36.8■■■■□ 3.48
LSM7-205ENST00000589532 XIRP1Q702N8 1843 aaKnown RBP36.79■■■■□ 3.48
LSM7-205ENST00000589532 ROCK1Q13464 1354 aa36.78■■■■□ 3.48
LSM7-205ENST00000589532 HSPA1LP34931 641 aa36.73■■■■□ 3.47
LSM7-205ENST00000589532 PIP4K2BP78356 416 aa36.73■■■■□ 3.47
LSM7-205ENST00000589532 EID1Q9Y6B2 187 aa36.73■■■■□ 3.47
LSM7-205ENST00000589532 IQGAP3Q86VI3 1631 aa36.72■■■■□ 3.47
LSM7-205ENST00000589532 E9PCH4 1651 aa36.7■■■■□ 3.47
LSM7-205ENST00000589532 MYO5BQ9ULV0 1848 aa36.69■■■■□ 3.46
LSM7-205ENST00000589532 SCAF1Q9H7N4 1312 aaKnown RBP36.68■■■■□ 3.46
LSM7-205ENST00000589532 SLC52A1Q9NWF4 448 aa36.68■■■■□ 3.46
LSM7-205ENST00000589532 STAG3Q9UJ98 1225 aa36.67■■■■□ 3.46
LSM7-205ENST00000589532 TMEM131LA2VDJ0 1609 aa36.67■■■■□ 3.46
LSM7-205ENST00000589532 NWD1Q149M9 1564 aa36.66■■■■□ 3.46
LSM7-205ENST00000589532 ZFYVE9O95405 1425 aa36.66■■■■□ 3.46
LSM7-205ENST00000589532 MED1Q15648 1581 aaPredicted RBP36.66■■■■□ 3.46
LSM7-205ENST00000589532 NKTRP30414 1462 aaKnown RBP36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms