RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 ASTLQ6HA08 431 aaPredicted RBP4.71□□□□□ -1.66
LINC01539-203ENST00000589447 MS4A3Q96HJ5 214 aa4.71□□□□□ -1.66
LINC01539-203ENST00000589447 TSPYL2Q9H2G4 693 aaPredicted RBP4.71□□□□□ -1.66
LINC01539-203ENST00000589447 MAP3K1Q13233 1512 aa4.71□□□□□ -1.66
LINC01539-203ENST00000589447 FRMPD1Q5SYB0 1578 aa4.7□□□□□ -1.66
LINC01539-203ENST00000589447 LRRIQ1Q96JM4 1722 aa4.7□□□□□ -1.66
LINC01539-203ENST00000589447 NEUROD2Q15784 382 aa4.7□□□□□ -1.66
LINC01539-203ENST00000589447 KIF12Q96FN5 646 aa4.7□□□□□ -1.66
LINC01539-203ENST00000589447 KIAA0586Q9BVV6 1533 aa4.7□□□□□ -1.66
LINC01539-203ENST00000589447 GLI2P10070 1586 aa4.7□□□□□ -1.66
LINC01539-203ENST00000589447 TIAM1Q13009 1591 aa4.7□□□□□ -1.66
LINC01539-203ENST00000589447 HECW2Q9P2P5 1572 aa4.7□□□□□ -1.66
LINC01539-203ENST00000589447 PRXQ9BXM0 1461 aa4.69□□□□□ -1.66
LINC01539-203ENST00000589447 COL17A1Q9UMD9 1497 aaPredicted RBP4.69□□□□□ -1.66
LINC01539-203ENST00000589447 CCNB3Q8WWL7 1395 aa4.69□□□□□ -1.66
LINC01539-203ENST00000589447 TIE1P35590 1138 aa4.69□□□□□ -1.66
LINC01539-203ENST00000589447 UGGT2Q9NYU1 1516 aa4.68□□□□□ -1.66
LINC01539-203ENST00000589447 ABCA8O94911 1581 aa4.68□□□□□ -1.66
LINC01539-203ENST00000589447 ADGRL1O94910 1474 aa4.68□□□□□ -1.66
LINC01539-203ENST00000589447 SAMD9Q5K651 1589 aa4.67□□□□□ -1.66
LINC01539-203ENST00000589447 CCER2I3L3R5 266 aa4.67□□□□□ -1.66
LINC01539-203ENST00000589447 SLC39A7Q92504 469 aa4.67□□□□□ -1.66
LINC01539-203ENST00000589447 IGF1RP08069 1367 aa4.66□□□□□ -1.66
LINC01539-203ENST00000589447 RICTORQ6R327 1708 aa4.66□□□□□ -1.66
LINC01539-203ENST00000589447 ASXL2Q76L83 1435 aa4.66□□□□□ -1.66
LINC01539-203ENST00000589447 ATMINO43313 823 aaPredicted RBP4.66□□□□□ -1.66
LINC01539-203ENST00000589447 C7P10643 843 aa4.66□□□□□ -1.66
LINC01539-203ENST00000589447 GSE1Q14687 1217 aa4.66□□□□□ -1.66
LINC01539-203ENST00000589447 FANCIQ9NVI1 1328 aa4.66□□□□□ -1.66
LINC01539-203ENST00000589447 EPRSP07814 1512 aaKnown RBP4.66□□□□□ -1.66
LINC01539-203ENST00000589447 KDM5BQ9UGL1 1544 aa4.66□□□□□ -1.66
LINC01539-203ENST00000589447 RAB3GAP2Q9H2M9 1393 aa4.65□□□□□ -1.66
LINC01539-203ENST00000589447 KIF27Q86VH2 1401 aa4.65□□□□□ -1.66
LINC01539-203ENST00000589447 SETD5Q9C0A6 1442 aa4.65□□□□□ -1.66
LINC01539-203ENST00000589447 UHRF1BP1LA0JNW5 1464 aa4.65□□□□□ -1.66
LINC01539-203ENST00000589447 PLB1Q6P1J6 1458 aa4.65□□□□□ -1.66
LINC01539-203ENST00000589447 MAP3K13O43283 966 aa4.65□□□□□ -1.67
LINC01539-203ENST00000589447 ANP32CO43423 234 aa4.65□□□□□ -1.67
LINC01539-203ENST00000589447 GTPBP6O43824 516 aaPredicted RBP4.65□□□□□ -1.67
LINC01539-203ENST00000589447 IER5LQ5T953 404 aa4.65□□□□□ -1.67
LINC01539-203ENST00000589447 CDK11AQ9UQ88 783 aaPredicted RBP4.65□□□□□ -1.67
LINC01539-203ENST00000589447 RBM19Q9Y4C8 960 aaKnown RBP4.65□□□□□ -1.67
LINC01539-203ENST00000589447 PCDHB13Q9Y5F0 798 aa4.65□□□□□ -1.67
LINC01539-203ENST00000589447 ABCA9Q8IUA7 1624 aa4.64□□□□□ -1.67
LINC01539-203ENST00000589447 ADAMTSL3P82987 1691 aa4.64□□□□□ -1.67
LINC01539-203ENST00000589447 ARHGAP35Q9NRY4 1499 aa4.64□□□□□ -1.67
LINC01539-203ENST00000589447 HSP90B1P14625 803 aaKnown RBP4.64□□□□□ -1.67
LINC01539-203ENST00000589447 ERICH6BQ5W0A0 696 aa4.64□□□□□ -1.67
LINC01539-203ENST00000589447 ZC3H15Q8WU90 426 aaKnown RBP4.64□□□□□ -1.67
LINC01539-203ENST00000589447 NECTIN2Q92692 538 aa4.64□□□□□ -1.67
LINC01539-203ENST00000589447 C1orf115Q9H7X2 142 aa4.64□□□□□ -1.67
LINC01539-203ENST00000589447 METRNQ9UJH8 293 aa4.64□□□□□ -1.67
LINC01539-203ENST00000589447 TTC37Q6PGP7 1564 aa4.64□□□□□ -1.67
LINC01539-203ENST00000589447 MADDQ8WXG6 1647 aa4.64□□□□□ -1.67
LINC01539-203ENST00000589447 POLR1AO95602 1720 aaPredicted RBP4.63□□□□□ -1.67
LINC01539-203ENST00000589447 KDM4FA0A1W2PPD8 638 aa4.63□□□□□ -1.67
LINC01539-203ENST00000589447 KCTD17Q8N5Z5 321 aa4.63□□□□□ -1.67
LINC01539-203ENST00000589447 BMP2KQ9NSY1 1161 aaPredicted RBP4.63□□□□□ -1.67
LINC01539-203ENST00000589447 RYDENQ9NUL5 291 aaKnown RBP4.63□□□□□ -1.67
LINC01539-203ENST00000589447 RAPGEF6Q8TEU7 1601 aa4.63□□□□□ -1.67
LINC01539-203ENST00000589447 RIMS1Q86UR5 1692 aaKnown RBP4.63□□□□□ -1.67
LINC01539-203ENST00000589447 BCORL1Q5H9F3 1711 aa4.63□□□□□ -1.67
LINC01539-203ENST00000589447 LRRC9Q6ZRR7 1453 aa4.62□□□□□ -1.67
LINC01539-203ENST00000589447 WDR7Q9Y4E6 1490 aa4.62□□□□□ -1.67
LINC01539-203ENST00000589447 ARHGEF40Q8TER5 1519 aa4.62□□□□□ -1.67
LINC01539-203ENST00000589447 PCF11O94913 1555 aaKnown RBP4.62□□□□□ -1.67
LINC01539-203ENST00000589447 TTLL13PA6NNM8 815 aa4.62□□□□□ -1.67
LINC01539-203ENST00000589447 MAMSTRQ6ZN01 415 aa4.62□□□□□ -1.67
LINC01539-203ENST00000589447 ZNF467Q7Z7K2 595 aaPredicted RBP4.62□□□□□ -1.67
LINC01539-203ENST00000589447 JPH4Q96JJ6 628 aa4.62□□□□□ -1.67
LINC01539-203ENST00000589447 ARID3AQ99856 593 aa4.62□□□□□ -1.67
LINC01539-203ENST00000589447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.62□□□□□ -1.67
LINC01539-203ENST00000589447 EFCAB5A4FU69 1503 aa4.62□□□□□ -1.67
LINC01539-203ENST00000589447 FER1L4A9Z1Z3 1794 aa4.61□□□□□ -1.67
LINC01539-203ENST00000589447 CHRM1P11229 460 aaPredicted RBP4.61□□□□□ -1.67
LINC01539-203ENST00000589447 CDK11BP21127 795 aaKnown RBP4.61□□□□□ -1.67
LINC01539-203ENST00000589447 ATN1P54259 1190 aaPredicted RBP4.61□□□□□ -1.67
LINC01539-203ENST00000589447 FAM69CQ0P6D2 419 aa4.61□□□□□ -1.67
LINC01539-203ENST00000589447 NKX1-1Q15270 411 aaPredicted RBP4.61□□□□□ -1.67
LINC01539-203ENST00000589447 KANK4Q5T7N3 995 aaPredicted RBP4.61□□□□□ -1.67
LINC01539-203ENST00000589447 IFNL1Q8IU54 200 aa4.61□□□□□ -1.67
LINC01539-203ENST00000589447 PUS7Q96PZ0 661 aaKnown RBP4.61□□□□□ -1.67
LINC01539-203ENST00000589447 CARMIL1Q5VZK9 1371 aa4.61□□□□□ -1.67
LINC01539-203ENST00000589447 IGSF3O75054 1194 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 PPP1R15AO75807 674 aaPredicted RBP4.6□□□□□ -1.67
LINC01539-203ENST00000589447 DDX10Q13206 875 aaKnown RBP4.6□□□□□ -1.67
LINC01539-203ENST00000589447 DCAF8Q5TAQ9 597 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 TRAIPQ9BWF2 469 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 SLC24A3Q9HC58 644 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 TONSLQ96HA7 1378 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 PTPRGP23470 1445 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 UACAQ9BZF9 1416 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 FYCO1Q9BQS8 1478 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 KIF14Q15058 1648 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 HECW1Q76N89 1606 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 GCC2Q8IWJ2 1684 aa4.6□□□□□ -1.67
LINC01539-203ENST00000589447 PTPN23Q9H3S7 1636 aa4.59□□□□□ -1.67
LINC01539-203ENST00000589447 MYO5CQ9NQX4 1742 aa4.59□□□□□ -1.67
LINC01539-203ENST00000589447 SUPT6HQ7KZ85 1726 aaKnown RBP4.58□□□□□ -1.68
LINC01539-203ENST00000589447 NUP153P49790 1475 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms