RNA–Protein interactions for RNA: ENST00000589419.1

CCBE1-204, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 4

Gene CCBE1, Length 587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-204ENST00000589419 TRIM52Q96A61 297 aa20.36■□□□□ 0.85
CCBE1-204ENST00000589419 ARHGEF40Q8TER5 1519 aa20.35■□□□□ 0.85
CCBE1-204ENST00000589419 PRDM15P57071 1507 aaPredicted RBP20.34■□□□□ 0.85
CCBE1-204ENST00000589419 MYT1LQ9UL68 1186 aa20.34■□□□□ 0.85
CCBE1-204ENST00000589419 FAM135AQ9P2D6 1515 aa20.33■□□□□ 0.85
CCBE1-204ENST00000589419 COL17A1Q9UMD9 1497 aaPredicted RBP20.32■□□□□ 0.84
CCBE1-204ENST00000589419 NUP155O75694 1391 aa20.32■□□□□ 0.84
CCBE1-204ENST00000589419 VWDEQ8N2E2 1590 aa20.31■□□□□ 0.84
CCBE1-204ENST00000589419 MPHOSPH9Q99550 1183 aa20.31■□□□□ 0.84
CCBE1-204ENST00000589419 MROH1Q8NDA8 1641 aa20.31■□□□□ 0.84
CCBE1-204ENST00000589419 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
CCBE1-204ENST00000589419 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
CCBE1-204ENST00000589419 ATP10AO60312 1499 aa20.28■□□□□ 0.84
CCBE1-204ENST00000589419 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
CCBE1-204ENST00000589419 AGLP35573 1532 aa20.26■□□□□ 0.83
CCBE1-204ENST00000589419 TET3O43151 1660 aa20.26■□□□□ 0.83
CCBE1-204ENST00000589419 KANK1Q14678 1352 aa20.24■□□□□ 0.83
CCBE1-204ENST00000589419 LMTK2Q8IWU2 1503 aa20.23■□□□□ 0.83
CCBE1-204ENST00000589419 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
CCBE1-204ENST00000589419 KIF3BO15066 747 aa20.22■□□□□ 0.83
CCBE1-204ENST00000589419 ANKRD30BQ9BXX2 1392 aa20.21■□□□□ 0.83
CCBE1-204ENST00000589419 PKD2Q13563 968 aa20.18■□□□□ 0.82
CCBE1-204ENST00000589419 CEP152O94986 1710 aa20.18■□□□□ 0.82
CCBE1-204ENST00000589419 EFCAB6Q5THR3 1501 aa20.17■□□□□ 0.82
CCBE1-204ENST00000589419 E9PCH4 1651 aa20.17■□□□□ 0.82
CCBE1-204ENST00000589419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCBE1-204ENST00000589419 TIMELESSQ9UNS1 1208 aa20.16■□□□□ 0.82
CCBE1-204ENST00000589419 ABCC3O15438 1527 aa20.16■□□□□ 0.82
CCBE1-204ENST00000589419 RPRD2Q5VT52 1461 aaKnown RBP20.15■□□□□ 0.82
CCBE1-204ENST00000589419 SIGLEC1Q9BZZ2 1709 aa20.14■□□□□ 0.81
CCBE1-204ENST00000589419 CAMSAP1Q5T5Y3 1602 aa20.13■□□□□ 0.81
CCBE1-204ENST00000589419 SPHKAPQ2M3C7 1700 aa20.12■□□□□ 0.81
CCBE1-204ENST00000589419 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
CCBE1-204ENST00000589419 TRPM2O94759 1503 aa20.11■□□□□ 0.81
CCBE1-204ENST00000589419 FOXD1Q16676 465 aa20.1■□□□□ 0.81
CCBE1-204ENST00000589419 PPP6R1Q9UPN7 881 aa20.09■□□□□ 0.81
CCBE1-204ENST00000589419 PTPRTO14522 1441 aa20.08■□□□□ 0.8
CCBE1-204ENST00000589419 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
CCBE1-204ENST00000589419 PLA2R1Q13018 1463 aa20.06■□□□□ 0.8
CCBE1-204ENST00000589419 NEUROD1Q13562 356 aa20.06■□□□□ 0.8
CCBE1-204ENST00000589419 ARHGAP31Q2M1Z3 1444 aa20.06■□□□□ 0.8
CCBE1-204ENST00000589419 GGT6Q6P531 493 aa20.06■□□□□ 0.8
CCBE1-204ENST00000589419 CCDC144AA2RUR9 1427 aa20.04■□□□□ 0.8
CCBE1-204ENST00000589419 WASHC2CQ9Y4E1 1318 aa20.02■□□□□ 0.8
CCBE1-204ENST00000589419 NPATQ14207 1427 aa20.02■□□□□ 0.8
CCBE1-204ENST00000589419 CLTCQ00610 1675 aaKnown RBP20.01■□□□□ 0.79
CCBE1-204ENST00000589419 NEURL4Q96JN8 1562 aa20.01■□□□□ 0.79
CCBE1-204ENST00000589419 CNTLNQ9NXG0 1405 aa20■□□□□ 0.79
CCBE1-204ENST00000589419 CLTCL1P53675 1640 aa19.99■□□□□ 0.79
CCBE1-204ENST00000589419 MROH2AA6NES4 1674 aa19.98■□□□□ 0.79
CCBE1-204ENST00000589419 PREX1Q8TCU6 1659 aa19.97■□□□□ 0.79
CCBE1-204ENST00000589419 NOS1P29475 1434 aa19.96■□□□□ 0.79
CCBE1-204ENST00000589419 PIK3C2BO00750 1634 aa19.94■□□□□ 0.78
CCBE1-204ENST00000589419 KIF1BO60333 1816 aa19.93■□□□□ 0.78
CCBE1-204ENST00000589419 PPP1R15AO75807 674 aaPredicted RBP19.93■□□□□ 0.78
CCBE1-204ENST00000589419 SYNMO15061 1565 aa19.92■□□□□ 0.78
CCBE1-204ENST00000589419 SPATA31E1Q6ZUB1 1445 aa19.92■□□□□ 0.78
CCBE1-204ENST00000589419 FER1L4A9Z1Z3 1794 aa19.91■□□□□ 0.78
CCBE1-204ENST00000589419 ARID4BQ4LE39 1312 aaPredicted RBP19.91■□□□□ 0.78
CCBE1-204ENST00000589419 ERVK-7P63135 1459 aa19.91■□□□□ 0.78
CCBE1-204ENST00000589419 SPATA31D1Q6ZQQ2 1576 aa19.91■□□□□ 0.78
CCBE1-204ENST00000589419 L3MBTL2Q969R5 705 aa19.9■□□□□ 0.78
CCBE1-204ENST00000589419 ADGRB3O60242 1522 aa19.89■□□□□ 0.77
CCBE1-204ENST00000589419 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
CCBE1-204ENST00000589419 CFAP65Q6ZU64 1925 aaKnown RBP19.88■□□□□ 0.77
CCBE1-204ENST00000589419 UHRF1BP1Q6BDS2 1440 aa19.87■□□□□ 0.77
CCBE1-204ENST00000589419 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
CCBE1-204ENST00000589419 MLECQ14165 292 aa19.86■□□□□ 0.77
CCBE1-204ENST00000589419 IFT172Q9UG01 1749 aa19.84■□□□□ 0.77
CCBE1-204ENST00000589419 ZMYM3Q14202 1370 aa19.83■□□□□ 0.76
CCBE1-204ENST00000589419 ADAMTSL3P82987 1691 aa19.81■□□□□ 0.76
CCBE1-204ENST00000589419 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
CCBE1-204ENST00000589419 SLC52A1Q9NWF4 448 aa19.81■□□□□ 0.76
CCBE1-204ENST00000589419 C3P01024 1663 aa19.81■□□□□ 0.76
CCBE1-204ENST00000589419 MYOM2P54296 1465 aa19.79■□□□□ 0.76
CCBE1-204ENST00000589419 MADDQ8WXG6 1647 aa19.79■□□□□ 0.76
CCBE1-204ENST00000589419 RALGAPBQ86X10 1494 aa19.79■□□□□ 0.76
CCBE1-204ENST00000589419 KDM5AP29375 1690 aaKnown RBP19.78■□□□□ 0.76
CCBE1-204ENST00000589419 TMEM131LA2VDJ0 1609 aa19.78■□□□□ 0.76
CCBE1-204ENST00000589419 PRAG1Q86YV5 1406 aa19.77■□□□□ 0.76
CCBE1-204ENST00000589419 PPLO60437 1756 aa19.77■□□□□ 0.76
CCBE1-204ENST00000589419 RIMS1Q86UR5 1692 aaKnown RBP19.76■□□□□ 0.75
CCBE1-204ENST00000589419 TRPM1Q7Z4N2 1603 aa19.76■□□□□ 0.75
CCBE1-204ENST00000589419 DCAF11Q8TEB1 546 aa19.75■□□□□ 0.75
CCBE1-204ENST00000589419 RGL3Q3MIN7 710 aa19.74■□□□□ 0.75
CCBE1-204ENST00000589419 KIAA1210Q9ULL0 1709 aa19.73■□□□□ 0.75
CCBE1-204ENST00000589419 TNRQ92752 1358 aa19.73■□□□□ 0.75
CCBE1-204ENST00000589419 FBXO31Q5XUX0 539 aaPredicted RBP19.73■□□□□ 0.75
CCBE1-204ENST00000589419 MYO5BQ9ULV0 1848 aa19.73■□□□□ 0.75
CCBE1-204ENST00000589419 RPGRIP1LQ68CZ1 1315 aa19.73■□□□□ 0.75
CCBE1-204ENST00000589419 LAMC1P11047 1609 aa19.73■□□□□ 0.75
CCBE1-204ENST00000589419 NBPF8Q3BBV2 869 aa19.72■□□□□ 0.75
CCBE1-204ENST00000589419 NLRP1Q9C000 1473 aa19.72■□□□□ 0.75
CCBE1-204ENST00000589419 NRXN1Q9ULB1 1477 aa19.72■□□□□ 0.75
CCBE1-204ENST00000589419 NEXMIFQ5QGS0 1516 aa19.71■□□□□ 0.75
CCBE1-204ENST00000589419 IDI1Q13907 227 aa19.7■□□□□ 0.74
CCBE1-204ENST00000589419 ZFYVE9O95405 1425 aa19.68■□□□□ 0.74
CCBE1-204ENST00000589419 ZNF316A6NFI3 1004 aaPredicted RBP19.67■□□□□ 0.74
CCBE1-204ENST00000589419 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
CCBE1-204ENST00000589419 UBR1Q8IWV7 1749 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms