RNA–Protein interactions for RNA: ENST00000589300.1

LINC00479-204, long intergenic non-protein coding RNA 479, humanhuman

TSL 1 (best) BASIC

Gene LINC00479, Length 718 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479-204ENST00000589300 KDM5DQ9BY66 1539 aa23.2■■□□□ 1.3
LINC00479-204ENST00000589300 CEP170BQ9Y4F5 1589 aaPredicted RBP23.19■■□□□ 1.3
LINC00479-204ENST00000589300 CERKQ8TCT0 537 aa23.19■■□□□ 1.3
LINC00479-204ENST00000589300 RNF17Q9BXT8 1623 aaKnown RBP23.17■■□□□ 1.3
LINC00479-204ENST00000589300 APLP2Q06481 763 aa23.16■■□□□ 1.3
LINC00479-204ENST00000589300 CROCC2H7BZ55 1655 aa23.16■■□□□ 1.3
LINC00479-204ENST00000589300 PTPN23Q9H3S7 1636 aa23.15■■□□□ 1.3
LINC00479-204ENST00000589300 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
LINC00479-204ENST00000589300 PZPP20742 1482 aa23.14■■□□□ 1.29
LINC00479-204ENST00000589300 PLA2R1Q13018 1463 aa23.12■■□□□ 1.29
LINC00479-204ENST00000589300 WASHC2CQ9Y4E1 1318 aa23.11■■□□□ 1.29
LINC00479-204ENST00000589300 A2ML1A8K2U0 1454 aa23.11■■□□□ 1.29
LINC00479-204ENST00000589300 ZC3H13Q5T200 1668 aaKnown RBP23.1■■□□□ 1.29
LINC00479-204ENST00000589300 DNMT1P26358 1616 aaKnown RBP23.1■■□□□ 1.29
LINC00479-204ENST00000589300 SHANK2Q9UPX8 1470 aa23.1■■□□□ 1.29
LINC00479-204ENST00000589300 ABCC5O15440 1437 aa23.09■■□□□ 1.29
LINC00479-204ENST00000589300 MROH1Q8NDA8 1641 aa23.09■■□□□ 1.29
LINC00479-204ENST00000589300 TCOF1Q13428 1488 aaKnown RBP23.09■■□□□ 1.29
LINC00479-204ENST00000589300 FGD6Q6ZV73 1430 aa23.08■■□□□ 1.29
LINC00479-204ENST00000589300 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
LINC00479-204ENST00000589300 FBXO31Q5XUX0 539 aaPredicted RBP23.08■■□□□ 1.29
LINC00479-204ENST00000589300 TNRQ92752 1358 aa23.08■■□□□ 1.29
LINC00479-204ENST00000589300 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.28
LINC00479-204ENST00000589300 ABCC3O15438 1527 aa23.08■■□□□ 1.28
LINC00479-204ENST00000589300 NCKAP5LQ9HCH0 1330 aa23.07■■□□□ 1.28
LINC00479-204ENST00000589300 PKD2Q13563 968 aa23.04■■□□□ 1.28
LINC00479-204ENST00000589300 DAPK1P53355 1430 aa23.04■■□□□ 1.28
LINC00479-204ENST00000589300 CEP152O94986 1710 aa23.04■■□□□ 1.28
LINC00479-204ENST00000589300 KIF15Q9NS87 1388 aa23.02■■□□□ 1.28
LINC00479-204ENST00000589300 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
LINC00479-204ENST00000589300 ERBINQ96RT1 1412 aa23■■□□□ 1.27
LINC00479-204ENST00000589300 NLRP1Q9C000 1473 aa23■■□□□ 1.27
LINC00479-204ENST00000589300 SPATA31D1Q6ZQQ2 1576 aa23■■□□□ 1.27
LINC00479-204ENST00000589300 PRDM15P57071 1507 aaPredicted RBP22.99■■□□□ 1.27
LINC00479-204ENST00000589300 CFAP65Q6ZU64 1925 aaKnown RBP22.98■■□□□ 1.27
LINC00479-204ENST00000589300 DEPDC5O75140 1603 aa22.97■■□□□ 1.27
LINC00479-204ENST00000589300 RRP7BPQ9NSQ0 103 aa22.97■■□□□ 1.27
LINC00479-204ENST00000589300 IQSEC2Q5JU85 1478 aa22.97■■□□□ 1.27
LINC00479-204ENST00000589300 NEURL4Q96JN8 1562 aa22.97■■□□□ 1.27
LINC00479-204ENST00000589300 ERVK-7P63135 1459 aa22.96■■□□□ 1.27
LINC00479-204ENST00000589300 UGGT1Q9NYU2 1555 aa22.95■■□□□ 1.26
LINC00479-204ENST00000589300 ZNF335Q9H4Z2 1342 aaPredicted RBP22.94■■□□□ 1.26
LINC00479-204ENST00000589300 ANKRD30AQ9BXX3 1397 aa22.92■■□□□ 1.26
LINC00479-204ENST00000589300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.9■■□□□ 1.26
LINC00479-204ENST00000589300 THEMISQ8N1K5 641 aaPredicted RBP22.9■■□□□ 1.26
LINC00479-204ENST00000589300 CHIC2Q9UKJ5 165 aa22.9■■□□□ 1.26
LINC00479-204ENST00000589300 ADGRL2O95490 1459 aa22.9■■□□□ 1.26
LINC00479-204ENST00000589300 ARHGAP31Q2M1Z3 1444 aa22.9■■□□□ 1.26
LINC00479-204ENST00000589300 UBR1Q8IWV7 1749 aa22.87■■□□□ 1.25
LINC00479-204ENST00000589300 VWDEQ8N2E2 1590 aa22.86■■□□□ 1.25
LINC00479-204ENST00000589300 ANKLE2Q86XL3 938 aa22.86■■□□□ 1.25
LINC00479-204ENST00000589300 MED14O60244 1454 aa22.85■■□□□ 1.25
LINC00479-204ENST00000589300 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
LINC00479-204ENST00000589300 LMTK2Q8IWU2 1503 aa22.84■■□□□ 1.25
LINC00479-204ENST00000589300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.25
LINC00479-204ENST00000589300 KANK1Q14678 1352 aa22.83■■□□□ 1.25
LINC00479-204ENST00000589300 IQGAP1P46940 1657 aa22.83■■□□□ 1.24
LINC00479-204ENST00000589300 NPHP4O75161 1426 aaPredicted RBP22.82■■□□□ 1.24
LINC00479-204ENST00000589300 CPS1P31327 1500 aa22.78■■□□□ 1.24
LINC00479-204ENST00000589300 PIK3C2BO00750 1634 aa22.78■■□□□ 1.24
LINC00479-204ENST00000589300 EFCAB6Q5THR3 1501 aa22.77■■□□□ 1.24
LINC00479-204ENST00000589300 ANKRD50Q9ULJ7 1429 aa22.77■■□□□ 1.24
LINC00479-204ENST00000589300 SLIT1O75093 1534 aa22.76■■□□□ 1.23
LINC00479-204ENST00000589300 ARHGAP23Q9P227 1491 aa22.75■■□□□ 1.23
LINC00479-204ENST00000589300 KDM5AP29375 1690 aaKnown RBP22.74■■□□□ 1.23
LINC00479-204ENST00000589300 SYNMO15061 1565 aa22.74■■□□□ 1.23
LINC00479-204ENST00000589300 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
LINC00479-204ENST00000589300 STRCP1A6NGW2 1772 aa22.72■■□□□ 1.23
LINC00479-204ENST00000589300 UBAP1LF5GYI3 381 aa22.72■■□□□ 1.23
LINC00479-204ENST00000589300 NOS1P29475 1434 aa22.71■■□□□ 1.23
LINC00479-204ENST00000589300 UNC13BO14795 1591 aa22.7■■□□□ 1.22
LINC00479-204ENST00000589300 TET3O43151 1660 aa22.7■■□□□ 1.22
LINC00479-204ENST00000589300 ROCK1Q13464 1354 aa22.69■■□□□ 1.22
LINC00479-204ENST00000589300 LTKP29376 864 aa22.68■■□□□ 1.22
LINC00479-204ENST00000589300 GCC2Q8IWJ2 1684 aa22.68■■□□□ 1.22
LINC00479-204ENST00000589300 RPRD2Q5VT52 1461 aaKnown RBP22.67■■□□□ 1.22
LINC00479-204ENST00000589300 IDI1Q13907 227 aa22.67■■□□□ 1.22
LINC00479-204ENST00000589300 TMEM2Q9UHN6 1383 aa22.66■■□□□ 1.22
LINC00479-204ENST00000589300 TXNDC2Q86VQ3 553 aa22.66■■□□□ 1.22
LINC00479-204ENST00000589300 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
LINC00479-204ENST00000589300 ADGRB3O60242 1522 aa22.64■■□□□ 1.21
LINC00479-204ENST00000589300 STAG3Q9UJ98 1225 aa22.63■■□□□ 1.21
LINC00479-204ENST00000589300 EID1Q9Y6B2 187 aa22.62■■□□□ 1.21
LINC00479-204ENST00000589300 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
LINC00479-204ENST00000589300 IQGAP3Q86VI3 1631 aa22.61■■□□□ 1.21
LINC00479-204ENST00000589300 MYO5BQ9ULV0 1848 aa22.61■■□□□ 1.21
LINC00479-204ENST00000589300 SLC52A1Q9NWF4 448 aa22.6■■□□□ 1.21
LINC00479-204ENST00000589300 E9PCH4 1651 aa22.6■■□□□ 1.21
LINC00479-204ENST00000589300 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
LINC00479-204ENST00000589300 TOM1O60784 492 aa22.59■■□□□ 1.21
LINC00479-204ENST00000589300 ITGAEP38570 1179 aa22.57■■□□□ 1.2
LINC00479-204ENST00000589300 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
LINC00479-204ENST00000589300 DISP3Q9P2K9 1392 aa22.55■■□□□ 1.2
LINC00479-204ENST00000589300 TMEM131LA2VDJ0 1609 aa22.54■■□□□ 1.2
LINC00479-204ENST00000589300 PIP4K2BP78356 416 aa22.54■■□□□ 1.2
LINC00479-204ENST00000589300 RRBP1Q9P2E9 1410 aaKnown RBP22.53■■□□□ 1.2
LINC00479-204ENST00000589300 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
LINC00479-204ENST00000589300 ZFYVE9O95405 1425 aa22.51■■□□□ 1.19
LINC00479-204ENST00000589300 NUP155O75694 1391 aa22.5■■□□□ 1.19
LINC00479-204ENST00000589300 HSPA1LP34931 641 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms