RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 TIAM1Q13009 1591 aa14.22□□□□□ -0.13
RETREG3-207ENST00000589007 MBD5Q9P267 1494 aa14.21□□□□□ -0.13
RETREG3-207ENST00000589007 CDK11AQ9UQ88 783 aaPredicted RBP14.2□□□□□ -0.14
RETREG3-207ENST00000589007 UBR1Q8IWV7 1749 aa14.2□□□□□ -0.14
RETREG3-207ENST00000589007 NPHP4O75161 1426 aaPredicted RBP14.19□□□□□ -0.14
RETREG3-207ENST00000589007 TOM1O60784 492 aa14.19□□□□□ -0.14
RETREG3-207ENST00000589007 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
RETREG3-207ENST00000589007 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
RETREG3-207ENST00000589007 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
RETREG3-207ENST00000589007 UGGT1Q9NYU2 1555 aa14.18□□□□□ -0.14
RETREG3-207ENST00000589007 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
RETREG3-207ENST00000589007 MROH1Q8NDA8 1641 aa14.17□□□□□ -0.14
RETREG3-207ENST00000589007 TNRQ92752 1358 aa14.17□□□□□ -0.14
RETREG3-207ENST00000589007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.17□□□□□ -0.14
RETREG3-207ENST00000589007 PLEKHH2Q8IVE3 1493 aa14.16□□□□□ -0.14
RETREG3-207ENST00000589007 NLRP1Q9C000 1473 aa14.16□□□□□ -0.14
RETREG3-207ENST00000589007 PHF23Q9BUL5 403 aaPredicted RBP14.15□□□□□ -0.14
RETREG3-207ENST00000589007 HNRNPMP52272 730 aaKnown RBP eCLIP14.14□□□□□ -0.15
RETREG3-207ENST00000589007 FBXO31Q5XUX0 539 aaPredicted RBP14.14□□□□□ -0.15
RETREG3-207ENST00000589007 MAP3K1Q13233 1512 aa14.14□□□□□ -0.15
RETREG3-207ENST00000589007 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
RETREG3-207ENST00000589007 ROBO1Q9Y6N7 1651 aa14.13□□□□□ -0.15
RETREG3-207ENST00000589007 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
RETREG3-207ENST00000589007 NCOA2Q15596 1464 aa14.12□□□□□ -0.15
RETREG3-207ENST00000589007 RTEL1-TNFRSF6BF6WH68 1400 aa14.11□□□□□ -0.15
RETREG3-207ENST00000589007 MIA2Q96PC5 1412 aa14.11□□□□□ -0.15
RETREG3-207ENST00000589007 ABCC3O15438 1527 aa14.1□□□□□ -0.15
RETREG3-207ENST00000589007 CEP152O94986 1710 aa14.1□□□□□ -0.15
RETREG3-207ENST00000589007 GGT6Q6P531 493 aa14.1□□□□□ -0.15
RETREG3-207ENST00000589007 ARHGAP23Q9P227 1491 aa14.1□□□□□ -0.15
RETREG3-207ENST00000589007 DHX29Q7Z478 1369 aaKnown RBP14.09□□□□□ -0.15
RETREG3-207ENST00000589007 SRCAPQ6ZRS2 3230 aa14.09□□□□□ -0.15
RETREG3-207ENST00000589007 CAMSAP2Q08AD1 1489 aa14.08□□□□□ -0.16
RETREG3-207ENST00000589007 SLIT1O75093 1534 aa14.08□□□□□ -0.16
RETREG3-207ENST00000589007 ERVK-7P63135 1459 aa14.07□□□□□ -0.16
RETREG3-207ENST00000589007 NWD1Q149M9 1564 aa14.05□□□□□ -0.16
RETREG3-207ENST00000589007 COL16A1Q07092 1604 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-207ENST00000589007 EIF2AK4Q9P2K8 1649 aaKnown RBP14.05□□□□□ -0.16
RETREG3-207ENST00000589007 ZNF777Q9ULD5 760 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-207ENST00000589007 ZNF644Q9H582 1327 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-207ENST00000589007 FAM135BQ49AJ0 1406 aa14.05□□□□□ -0.16
RETREG3-207ENST00000589007 SCAF11Q99590 1463 aaKnown RBP14.04□□□□□ -0.16
RETREG3-207ENST00000589007 ANKLE2Q86XL3 938 aa14.03□□□□□ -0.16
RETREG3-207ENST00000589007 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
RETREG3-207ENST00000589007 CCDC141Q6ZP82 1450 aa14.03□□□□□ -0.16
RETREG3-207ENST00000589007 EHBP1L1Q8N3D4 1523 aa14.03□□□□□ -0.16
RETREG3-207ENST00000589007 ARHGEF5Q12774 1597 aa14.03□□□□□ -0.16
RETREG3-207ENST00000589007 PHLPP1O60346 1717 aa14.02□□□□□ -0.16
RETREG3-207ENST00000589007 LRP6O75581 1613 aa14.02□□□□□ -0.16
RETREG3-207ENST00000589007 CFAP65Q6ZU64 1925 aaKnown RBP14.02□□□□□ -0.17
RETREG3-207ENST00000589007 PIK3C2BO00750 1634 aa14.01□□□□□ -0.17
RETREG3-207ENST00000589007 MAST1Q9Y2H9 1570 aa14.01□□□□□ -0.17
RETREG3-207ENST00000589007 TET3O43151 1660 aa14.01□□□□□ -0.17
RETREG3-207ENST00000589007 KDM5AP29375 1690 aaKnown RBP14.01□□□□□ -0.17
RETREG3-207ENST00000589007 CCNB3Q8WWL7 1395 aa13.99□□□□□ -0.17
RETREG3-207ENST00000589007 THEMISQ8N1K5 641 aaPredicted RBP13.98□□□□□ -0.17
RETREG3-207ENST00000589007 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
RETREG3-207ENST00000589007 CEP162Q5TB80 1403 aa13.98□□□□□ -0.17
RETREG3-207ENST00000589007 PRDM15P57071 1507 aaPredicted RBP13.97□□□□□ -0.17
RETREG3-207ENST00000589007 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
RETREG3-207ENST00000589007 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
RETREG3-207ENST00000589007 SHPRHQ149N8 1683 aa13.97□□□□□ -0.17
RETREG3-207ENST00000589007 KIF3BO15066 747 aa13.95□□□□□ -0.18
RETREG3-207ENST00000589007 LTKP29376 864 aa13.95□□□□□ -0.18
RETREG3-207ENST00000589007 DIP2AQ14689 1571 aa13.95□□□□□ -0.18
RETREG3-207ENST00000589007 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
RETREG3-207ENST00000589007 TMEM94Q12767 1356 aa13.92□□□□□ -0.18
RETREG3-207ENST00000589007 NKTRP30414 1462 aaKnown RBP13.92□□□□□ -0.18
RETREG3-207ENST00000589007 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
RETREG3-207ENST00000589007 UPF1Q92900 1129 aaKnown RBP eCLIP13.91□□□□□ -0.18
RETREG3-207ENST00000589007 WASHC2CQ9Y4E1 1318 aa13.9□□□□□ -0.18
RETREG3-207ENST00000589007 AHDC1Q5TGY3 1603 aaPredicted RBP13.9□□□□□ -0.18
RETREG3-207ENST00000589007 CROCC2H7BZ55 1655 aa13.9□□□□□ -0.18
RETREG3-207ENST00000589007 MYO5BQ9ULV0 1848 aa13.9□□□□□ -0.18
RETREG3-207ENST00000589007 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.19
RETREG3-207ENST00000589007 MTUS2Q5JR59 1369 aa13.88□□□□□ -0.19
RETREG3-207ENST00000589007 CDK12Q9NYV4 1490 aaPredicted RBP13.87□□□□□ -0.19
RETREG3-207ENST00000589007 ADGRB3O60242 1522 aa13.85□□□□□ -0.19
RETREG3-207ENST00000589007 EFCAB6Q5THR3 1501 aa13.85□□□□□ -0.19
RETREG3-207ENST00000589007 TMEM2Q9UHN6 1383 aa13.85□□□□□ -0.19
RETREG3-207ENST00000589007 JCADQ9P266 1359 aa13.84□□□□□ -0.19
RETREG3-207ENST00000589007 EP400Q96L91 3159 aa13.84□□□□□ -0.19
RETREG3-207ENST00000589007 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
RETREG3-207ENST00000589007 FGD6Q6ZV73 1430 aa13.83□□□□□ -0.2
RETREG3-207ENST00000589007 LMTK2Q8IWU2 1503 aa13.82□□□□□ -0.2
RETREG3-207ENST00000589007 NHSL1Q5SYE7 1610 aa13.82□□□□□ -0.2
RETREG3-207ENST00000589007 DUOX2Q9NRD8 1548 aa13.81□□□□□ -0.2
RETREG3-207ENST00000589007 RGS12O14924 1447 aa13.81□□□□□ -0.2
RETREG3-207ENST00000589007 GCC2Q8IWJ2 1684 aa13.8□□□□□ -0.2
RETREG3-207ENST00000589007 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
RETREG3-207ENST00000589007 TXNDC2Q86VQ3 553 aa13.79□□□□□ -0.2
RETREG3-207ENST00000589007 ZFYVE9O95405 1425 aa13.79□□□□□ -0.2
RETREG3-207ENST00000589007 KCNA6P17658 529 aa13.78□□□□□ -0.2
RETREG3-207ENST00000589007 NOS1P29475 1434 aa13.77□□□□□ -0.21
RETREG3-207ENST00000589007 SETBP1Q9Y6X0 1596 aa13.77□□□□□ -0.21
RETREG3-207ENST00000589007 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
RETREG3-207ENST00000589007 ERBINQ96RT1 1412 aa13.74□□□□□ -0.21
RETREG3-207ENST00000589007 SPATA31A6Q5VVP1 1343 aa13.74□□□□□ -0.21
RETREG3-207ENST00000589007 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
RETREG3-207ENST00000589007 RSPH4AQ5TD94 716 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms