RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 PPARGC1BQ86YN6 1023 aaKnown RBP17.93■□□□□ 0.46
RFX1-204ENST00000588885 ARHGEF5Q12774 1597 aa17.92■□□□□ 0.46
RFX1-204ENST00000588885 WASHC2CQ9Y4E1 1318 aa17.92■□□□□ 0.46
RFX1-204ENST00000588885 RRP7BPQ9NSQ0 103 aa17.91■□□□□ 0.46
RFX1-204ENST00000588885 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
RFX1-204ENST00000588885 FAM50AQ14320 339 aaKnown RBP17.9■□□□□ 0.46
RFX1-204ENST00000588885 FBXO31Q5XUX0 539 aaPredicted RBP17.9■□□□□ 0.46
RFX1-204ENST00000588885 ABCC5O15440 1437 aa17.89■□□□□ 0.45
RFX1-204ENST00000588885 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
RFX1-204ENST00000588885 CERKQ8TCT0 537 aa17.88■□□□□ 0.45
RFX1-204ENST00000588885 NPATQ14207 1427 aa17.86■□□□□ 0.45
RFX1-204ENST00000588885 PTPRKQ15262 1439 aa17.86■□□□□ 0.45
RFX1-204ENST00000588885 MYO3AQ8NEV4 1616 aa17.85■□□□□ 0.45
RFX1-204ENST00000588885 PTPN23Q9H3S7 1636 aa17.85■□□□□ 0.45
RFX1-204ENST00000588885 DAPK1P53355 1430 aa17.83■□□□□ 0.45
RFX1-204ENST00000588885 KIF15Q9NS87 1388 aa17.83■□□□□ 0.45
RFX1-204ENST00000588885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.44
RFX1-204ENST00000588885 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.44
RFX1-204ENST00000588885 NCKAP5LQ9HCH0 1330 aa17.82■□□□□ 0.44
RFX1-204ENST00000588885 MAST1Q9Y2H9 1570 aa17.82■□□□□ 0.44
RFX1-204ENST00000588885 ZNF142P52746 1687 aaPredicted RBP17.81■□□□□ 0.44
RFX1-204ENST00000588885 TCOF1Q13428 1488 aaKnown RBP17.81■□□□□ 0.44
RFX1-204ENST00000588885 TNRQ92752 1358 aa17.79■□□□□ 0.44
RFX1-204ENST00000588885 PTPRTO14522 1441 aa17.78■□□□□ 0.44
RFX1-204ENST00000588885 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
RFX1-204ENST00000588885 CEP170BQ9Y4F5 1589 aaPredicted RBP17.78■□□□□ 0.44
RFX1-204ENST00000588885 ANKRD30AQ9BXX3 1397 aa17.78■□□□□ 0.44
RFX1-204ENST00000588885 KDM5DQ9BY66 1539 aa17.77■□□□□ 0.44
RFX1-204ENST00000588885 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.43
RFX1-204ENST00000588885 SHANK2Q9UPX8 1470 aa17.76■□□□□ 0.43
RFX1-204ENST00000588885 ITGAEP38570 1179 aa17.76■□□□□ 0.43
RFX1-204ENST00000588885 PZPP20742 1482 aa17.75■□□□□ 0.43
RFX1-204ENST00000588885 CFAP65Q6ZU64 1925 aaKnown RBP17.74■□□□□ 0.43
RFX1-204ENST00000588885 DNMT1P26358 1616 aaKnown RBP17.73■□□□□ 0.43
RFX1-204ENST00000588885 ABCC3O15438 1527 aa17.72■□□□□ 0.43
RFX1-204ENST00000588885 POLR1AO95602 1720 aaPredicted RBP17.72■□□□□ 0.43
RFX1-204ENST00000588885 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
RFX1-204ENST00000588885 PKD2Q13563 968 aa17.71■□□□□ 0.43
RFX1-204ENST00000588885 ERBINQ96RT1 1412 aa17.71■□□□□ 0.43
RFX1-204ENST00000588885 A2ML1A8K2U0 1454 aa17.7■□□□□ 0.42
RFX1-204ENST00000588885 RNF17Q9BXT8 1623 aaKnown RBP17.69■□□□□ 0.42
RFX1-204ENST00000588885 FAM135AQ9P2D6 1515 aa17.69■□□□□ 0.42
RFX1-204ENST00000588885 KANK1Q14678 1352 aa17.68■□□□□ 0.42
RFX1-204ENST00000588885 CROCC2H7BZ55 1655 aa17.68■□□□□ 0.42
RFX1-204ENST00000588885 THEMISQ8N1K5 641 aaPredicted RBP17.68■□□□□ 0.42
RFX1-204ENST00000588885 MROH1Q8NDA8 1641 aa17.68■□□□□ 0.42
RFX1-204ENST00000588885 EIF2AK4Q9P2K8 1649 aaKnown RBP17.68■□□□□ 0.42
RFX1-204ENST00000588885 PLA2R1Q13018 1463 aa17.68■□□□□ 0.42
RFX1-204ENST00000588885 ZC3H13Q5T200 1668 aaKnown RBP17.67■□□□□ 0.42
RFX1-204ENST00000588885 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.67■□□□□ 0.42
RFX1-204ENST00000588885 CEP152O94986 1710 aa17.67■□□□□ 0.42
RFX1-204ENST00000588885 ZNF335Q9H4Z2 1342 aaPredicted RBP17.66■□□□□ 0.42
RFX1-204ENST00000588885 ANKLE2Q86XL3 938 aa17.65■□□□□ 0.42
RFX1-204ENST00000588885 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
RFX1-204ENST00000588885 ERVK-7P63135 1459 aa17.64■□□□□ 0.41
RFX1-204ENST00000588885 ANKRD50Q9ULJ7 1429 aa17.64■□□□□ 0.41
RFX1-204ENST00000588885 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
RFX1-204ENST00000588885 NLRP1Q9C000 1473 aa17.63■□□□□ 0.41
RFX1-204ENST00000588885 IQSEC2Q5JU85 1478 aa17.62■□□□□ 0.41
RFX1-204ENST00000588885 PRDM15P57071 1507 aaPredicted RBP17.6■□□□□ 0.41
RFX1-204ENST00000588885 UGGT1Q9NYU2 1555 aa17.6■□□□□ 0.41
RFX1-204ENST00000588885 SPATA31D1Q6ZQQ2 1576 aa17.59■□□□□ 0.41
RFX1-204ENST00000588885 ARHGAP31Q2M1Z3 1444 aa17.59■□□□□ 0.41
RFX1-204ENST00000588885 STAG3Q9UJ98 1225 aa17.59■□□□□ 0.41
RFX1-204ENST00000588885 IDI1Q13907 227 aa17.57■□□□□ 0.4
RFX1-204ENST00000588885 ROCK1Q13464 1354 aa17.56■□□□□ 0.4
RFX1-204ENST00000588885 UBAP1LF5GYI3 381 aa17.56■□□□□ 0.4
RFX1-204ENST00000588885 DISP3Q9P2K9 1392 aa17.55■□□□□ 0.4
RFX1-204ENST00000588885 TXNDC2Q86VQ3 553 aa17.55■□□□□ 0.4
RFX1-204ENST00000588885 DEPDC5O75140 1603 aa17.54■□□□□ 0.4
RFX1-204ENST00000588885 LTKP29376 864 aa17.54■□□□□ 0.4
RFX1-204ENST00000588885 IQGAP1P46940 1657 aa17.54■□□□□ 0.4
RFX1-204ENST00000588885 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
RFX1-204ENST00000588885 NEURL4Q96JN8 1562 aa17.53■□□□□ 0.4
RFX1-204ENST00000588885 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
RFX1-204ENST00000588885 LMTK2Q8IWU2 1503 aa17.52■□□□□ 0.4
RFX1-204ENST00000588885 EID1Q9Y6B2 187 aa17.51■□□□□ 0.39
RFX1-204ENST00000588885 NUP155O75694 1391 aa17.51■□□□□ 0.39
RFX1-204ENST00000588885 CPS1P31327 1500 aa17.5■□□□□ 0.39
RFX1-204ENST00000588885 UBR1Q8IWV7 1749 aa17.5■□□□□ 0.39
RFX1-204ENST00000588885 RRBP1Q9P2E9 1410 aaKnown RBP17.49■□□□□ 0.39
RFX1-204ENST00000588885 NOS1P29475 1434 aa17.48■□□□□ 0.39
RFX1-204ENST00000588885 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
RFX1-204ENST00000588885 CHGAP10645 457 aaKnown RBP17.48■□□□□ 0.39
RFX1-204ENST00000588885 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
RFX1-204ENST00000588885 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
RFX1-204ENST00000588885 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
RFX1-204ENST00000588885 MED14O60244 1454 aa17.46■□□□□ 0.39
RFX1-204ENST00000588885 TMEM2Q9UHN6 1383 aa17.46■□□□□ 0.39
RFX1-204ENST00000588885 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
RFX1-204ENST00000588885 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
RFX1-204ENST00000588885 BCANQ96GW7 911 aa17.45■□□□□ 0.38
RFX1-204ENST00000588885 SYNMO15061 1565 aa17.45■□□□□ 0.38
RFX1-204ENST00000588885 PIK3C2BO00750 1634 aa17.43■□□□□ 0.38
RFX1-204ENST00000588885 TOM1O60784 492 aa17.43■□□□□ 0.38
RFX1-204ENST00000588885 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
RFX1-204ENST00000588885 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
RFX1-204ENST00000588885 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
RFX1-204ENST00000588885 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
RFX1-204ENST00000588885 RPRD2Q5VT52 1461 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms