RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 FYCO1Q9BQS8 1478 aa12.2□□□□□ -0.46
GPATCH8-206ENST00000588554 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
GPATCH8-206ENST00000588554 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
GPATCH8-206ENST00000588554 ABCC1P33527 1531 aa12.18□□□□□ -0.46
GPATCH8-206ENST00000588554 GPATCH8Q9UKJ3 1502 aaKnown RBP12.18□□□□□ -0.46
GPATCH8-206ENST00000588554 FBXO41Q8TF61 875 aa12.18□□□□□ -0.46
GPATCH8-206ENST00000588554 MLH3Q9UHC1 1453 aa12.18□□□□□ -0.46
GPATCH8-206ENST00000588554 ITSN2Q9NZM3 1697 aa12.17□□□□□ -0.46
GPATCH8-206ENST00000588554 ZNF644Q9H582 1327 aaPredicted RBP12.16□□□□□ -0.46
GPATCH8-206ENST00000588554 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
GPATCH8-206ENST00000588554 CD44P16070 742 aaKnown RBP12.16□□□□□ -0.46
GPATCH8-206ENST00000588554 CFDP1Q9UEE9 299 aaPredicted RBP12.16□□□□□ -0.46
GPATCH8-206ENST00000588554 SAMD9LQ8IVG5 1584 aa12.16□□□□□ -0.46
GPATCH8-206ENST00000588554 KIDINS220Q9ULH0 1771 aa12.15□□□□□ -0.46
GPATCH8-206ENST00000588554 LOC105371045A0A1W2PR82 267 aa12.15□□□□□ -0.46
GPATCH8-206ENST00000588554 MIER1Q8N108 512 aa12.14□□□□□ -0.47
GPATCH8-206ENST00000588554 SYCP2Q9BX26 1530 aa12.14□□□□□ -0.47
GPATCH8-206ENST00000588554 SPAG9O60271 1321 aaKnown RBP12.13□□□□□ -0.47
GPATCH8-206ENST00000588554 CCNB3Q8WWL7 1395 aa12.13□□□□□ -0.47
GPATCH8-206ENST00000588554 ESF1Q9H501 851 aaKnown RBP12.12□□□□□ -0.47
GPATCH8-206ENST00000588554 MTUS2Q5JR59 1369 aa12.12□□□□□ -0.47
GPATCH8-206ENST00000588554 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
GPATCH8-206ENST00000588554 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
GPATCH8-206ENST00000588554 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
GPATCH8-206ENST00000588554 AGLP35573 1532 aa12.11□□□□□ -0.47
GPATCH8-206ENST00000588554 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
GPATCH8-206ENST00000588554 C3P01024 1663 aa12.1□□□□□ -0.47
GPATCH8-206ENST00000588554 PREX1Q8TCU6 1659 aa12.1□□□□□ -0.47
GPATCH8-206ENST00000588554 CERKQ8TCT0 537 aa12.1□□□□□ -0.47
GPATCH8-206ENST00000588554 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
GPATCH8-206ENST00000588554 SUPT6HQ7KZ85 1726 aaKnown RBP12.08□□□□□ -0.47
GPATCH8-206ENST00000588554 STRCQ7RTU9 1775 aa12.08□□□□□ -0.48
GPATCH8-206ENST00000588554 GGT6Q6P531 493 aa12.08□□□□□ -0.48
GPATCH8-206ENST00000588554 UHRF1BP1Q6BDS2 1440 aa12.08□□□□□ -0.48
GPATCH8-206ENST00000588554 TIAM1Q13009 1591 aa12.07□□□□□ -0.48
GPATCH8-206ENST00000588554 KIAA1107Q9UPP5 1409 aa12.07□□□□□ -0.48
GPATCH8-206ENST00000588554 ATP7AQ04656 1500 aa12.06□□□□□ -0.48
GPATCH8-206ENST00000588554 ZMYM3Q14202 1370 aa12.06□□□□□ -0.48
GPATCH8-206ENST00000588554 PAK3O75914 559 aaPredicted RBP12.06□□□□□ -0.48
GPATCH8-206ENST00000588554 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
GPATCH8-206ENST00000588554 A2MP01023 1474 aa12.05□□□□□ -0.48
GPATCH8-206ENST00000588554 MBD5Q9P267 1494 aa12.05□□□□□ -0.48
GPATCH8-206ENST00000588554 INO80Q9ULG1 1556 aaPredicted RBP12.05□□□□□ -0.48
GPATCH8-206ENST00000588554 PLEKHH2Q8IVE3 1493 aa12.04□□□□□ -0.48
GPATCH8-206ENST00000588554 EHBP1L1Q8N3D4 1523 aa12.03□□□□□ -0.48
GPATCH8-206ENST00000588554 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
GPATCH8-206ENST00000588554 CLTCQ00610 1675 aaKnown RBP12.03□□□□□ -0.48
GPATCH8-206ENST00000588554 NCOA2Q15596 1464 aa12.02□□□□□ -0.48
GPATCH8-206ENST00000588554 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
GPATCH8-206ENST00000588554 CNTLNQ9NXG0 1405 aa12.02□□□□□ -0.49
GPATCH8-206ENST00000588554 PLXNC1O60486 1568 aa12.01□□□□□ -0.49
GPATCH8-206ENST00000588554 GABBR2O75899 941 aa12.01□□□□□ -0.49
GPATCH8-206ENST00000588554 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
GPATCH8-206ENST00000588554 SETD1BQ9UPS6 1966 aaKnown RBP12.01□□□□□ -0.49
GPATCH8-206ENST00000588554 CLCN6P51797 869 aa12□□□□□ -0.49
GPATCH8-206ENST00000588554 FBXO31Q5XUX0 539 aaPredicted RBP12□□□□□ -0.49
GPATCH8-206ENST00000588554 KIF3BO15066 747 aa11.99□□□□□ -0.49
GPATCH8-206ENST00000588554 PTPRKQ15262 1439 aa11.99□□□□□ -0.49
GPATCH8-206ENST00000588554 CAMSAP2Q08AD1 1489 aa11.99□□□□□ -0.49
GPATCH8-206ENST00000588554 CAMSAP1Q5T5Y3 1602 aa11.98□□□□□ -0.49
GPATCH8-206ENST00000588554 NCOA1Q15788 1441 aa11.98□□□□□ -0.49
GPATCH8-206ENST00000588554 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
GPATCH8-206ENST00000588554 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
GPATCH8-206ENST00000588554 MROH2AA6NES4 1674 aa11.97□□□□□ -0.49
GPATCH8-206ENST00000588554 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
GPATCH8-206ENST00000588554 RTEL1-TNFRSF6BF6WH68 1400 aa11.97□□□□□ -0.49
GPATCH8-206ENST00000588554 PTPRTO14522 1441 aa11.97□□□□□ -0.49
GPATCH8-206ENST00000588554 NPATQ14207 1427 aa11.97□□□□□ -0.49
GPATCH8-206ENST00000588554 VPS8Q8N3P4 1428 aa11.96□□□□□ -0.49
GPATCH8-206ENST00000588554 LHX8Q68G74 356 aa11.96□□□□□ -0.49
GPATCH8-206ENST00000588554 LRRC9Q6ZRR7 1453 aa11.95□□□□□ -0.5
GPATCH8-206ENST00000588554 CCDC141Q6ZP82 1450 aa11.95□□□□□ -0.5
GPATCH8-206ENST00000588554 LTBP4Q8N2S1 1624 aa11.94□□□□□ -0.5
GPATCH8-206ENST00000588554 ZNF335Q9H4Z2 1342 aaPredicted RBP11.94□□□□□ -0.5
GPATCH8-206ENST00000588554 MYO3AQ8NEV4 1616 aa11.93□□□□□ -0.5
GPATCH8-206ENST00000588554 WASHC2CQ9Y4E1 1318 aa11.93□□□□□ -0.5
GPATCH8-206ENST00000588554 TSPY4P0CV99 314 aa11.93□□□□□ -0.5
GPATCH8-206ENST00000588554 TSPY10P0CW01 314 aa11.93□□□□□ -0.5
GPATCH8-206ENST00000588554 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
GPATCH8-206ENST00000588554 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
GPATCH8-206ENST00000588554 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
GPATCH8-206ENST00000588554 VASPP50552 380 aaPredicted RBP11.9□□□□□ -0.5
GPATCH8-206ENST00000588554 ARHGEF5Q12774 1597 aa11.89□□□□□ -0.51
GPATCH8-206ENST00000588554 PKD2Q13563 968 aa11.89□□□□□ -0.51
GPATCH8-206ENST00000588554 DNMT1P26358 1616 aaKnown RBP11.89□□□□□ -0.51
GPATCH8-206ENST00000588554 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
GPATCH8-206ENST00000588554 ZNF142P52746 1687 aaPredicted RBP11.88□□□□□ -0.51
GPATCH8-206ENST00000588554 TNRQ92752 1358 aa11.88□□□□□ -0.51
GPATCH8-206ENST00000588554 A2ML1A8K2U0 1454 aa11.88□□□□□ -0.51
GPATCH8-206ENST00000588554 KDM5DQ9BY66 1539 aa11.87□□□□□ -0.51
GPATCH8-206ENST00000588554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.87□□□□□ -0.51
GPATCH8-206ENST00000588554 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
GPATCH8-206ENST00000588554 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
GPATCH8-206ENST00000588554 RRP7BPQ9NSQ0 103 aa11.86□□□□□ -0.51
GPATCH8-206ENST00000588554 PZPP20742 1482 aa11.86□□□□□ -0.51
GPATCH8-206ENST00000588554 PLA2R1Q13018 1463 aa11.86□□□□□ -0.51
GPATCH8-206ENST00000588554 MIA2Q96PC5 1412 aa11.86□□□□□ -0.51
GPATCH8-206ENST00000588554 UBAP1LF5GYI3 381 aa11.85□□□□□ -0.51
GPATCH8-206ENST00000588554 ILDR2Q71H61 639 aa11.85□□□□□ -0.51
GPATCH8-206ENST00000588554 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms