RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 CHIC2Q9UKJ5 165 aa13.69□□□□□ -0.22
SDF2-207ENST00000588472 FGD6Q6ZV73 1430 aa13.69□□□□□ -0.22
SDF2-207ENST00000588472 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
SDF2-207ENST00000588472 IQSEC2Q5JU85 1478 aa13.66□□□□□ -0.22
SDF2-207ENST00000588472 WASHC2CQ9Y4E1 1318 aa13.65□□□□□ -0.22
SDF2-207ENST00000588472 ABCC5O15440 1437 aa13.65□□□□□ -0.22
SDF2-207ENST00000588472 MAST1Q9Y2H9 1570 aa13.64□□□□□ -0.23
SDF2-207ENST00000588472 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
SDF2-207ENST00000588472 DAPK1P53355 1430 aa13.64□□□□□ -0.23
SDF2-207ENST00000588472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.23
SDF2-207ENST00000588472 LTBP4Q8N2S1 1624 aa13.63□□□□□ -0.23
SDF2-207ENST00000588472 SETD1BQ9UPS6 1966 aaKnown RBP13.63□□□□□ -0.23
SDF2-207ENST00000588472 NCOA1Q15788 1441 aa13.63□□□□□ -0.23
SDF2-207ENST00000588472 MROH2AA6NES4 1674 aa13.63□□□□□ -0.23
SDF2-207ENST00000588472 KIF15Q9NS87 1388 aa13.62□□□□□ -0.23
SDF2-207ENST00000588472 FBXO31Q5XUX0 539 aaPredicted RBP13.62□□□□□ -0.23
SDF2-207ENST00000588472 TCOF1Q13428 1488 aaKnown RBP13.61□□□□□ -0.23
SDF2-207ENST00000588472 ITGAEP38570 1179 aa13.61□□□□□ -0.23
SDF2-207ENST00000588472 DNMT1P26358 1616 aaKnown RBP13.6□□□□□ -0.23
SDF2-207ENST00000588472 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
SDF2-207ENST00000588472 NPATQ14207 1427 aa13.59□□□□□ -0.23
SDF2-207ENST00000588472 PTPRKQ15262 1439 aa13.59□□□□□ -0.23
SDF2-207ENST00000588472 UBAP1LF5GYI3 381 aa13.59□□□□□ -0.23
SDF2-207ENST00000588472 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
SDF2-207ENST00000588472 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.23
SDF2-207ENST00000588472 SHANK2Q9UPX8 1470 aa13.58□□□□□ -0.24
SDF2-207ENST00000588472 KDM5DQ9BY66 1539 aa13.58□□□□□ -0.24
SDF2-207ENST00000588472 NCKAP5LQ9HCH0 1330 aa13.57□□□□□ -0.24
SDF2-207ENST00000588472 CAMSAP1Q5T5Y3 1602 aa13.57□□□□□ -0.24
SDF2-207ENST00000588472 ZNF335Q9H4Z2 1342 aaPredicted RBP13.56□□□□□ -0.24
SDF2-207ENST00000588472 PKD2Q13563 968 aa13.55□□□□□ -0.24
SDF2-207ENST00000588472 TNRQ92752 1358 aa13.55□□□□□ -0.24
SDF2-207ENST00000588472 EIF2AK4Q9P2K8 1649 aaKnown RBP13.54□□□□□ -0.24
SDF2-207ENST00000588472 MYO3AQ8NEV4 1616 aa13.53□□□□□ -0.24
SDF2-207ENST00000588472 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
SDF2-207ENST00000588472 ERBINQ96RT1 1412 aa13.53□□□□□ -0.24
SDF2-207ENST00000588472 PZPP20742 1482 aa13.53□□□□□ -0.24
SDF2-207ENST00000588472 ABCC3O15438 1527 aa13.53□□□□□ -0.24
SDF2-207ENST00000588472 KANK1Q14678 1352 aa13.52□□□□□ -0.25
SDF2-207ENST00000588472 CEP152O94986 1710 aa13.52□□□□□ -0.25
SDF2-207ENST00000588472 MROH1Q8NDA8 1641 aa13.51□□□□□ -0.25
SDF2-207ENST00000588472 CEP170BQ9Y4F5 1589 aaPredicted RBP13.51□□□□□ -0.25
SDF2-207ENST00000588472 CFAP65Q6ZU64 1925 aaKnown RBP13.51□□□□□ -0.25
SDF2-207ENST00000588472 FAM135AQ9P2D6 1515 aa13.5□□□□□ -0.25
SDF2-207ENST00000588472 PLA2R1Q13018 1463 aa13.5□□□□□ -0.25
SDF2-207ENST00000588472 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
SDF2-207ENST00000588472 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
SDF2-207ENST00000588472 ADGRL2O95490 1459 aa13.48□□□□□ -0.25
SDF2-207ENST00000588472 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
SDF2-207ENST00000588472 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
SDF2-207ENST00000588472 ZNF142P52746 1687 aaPredicted RBP13.47□□□□□ -0.25
SDF2-207ENST00000588472 PRDM15P57071 1507 aaPredicted RBP13.46□□□□□ -0.25
SDF2-207ENST00000588472 THEMISQ8N1K5 641 aaPredicted RBP13.46□□□□□ -0.25
SDF2-207ENST00000588472 ERVK-7P63135 1459 aa13.46□□□□□ -0.25
SDF2-207ENST00000588472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
SDF2-207ENST00000588472 TOM1O60784 492 aa13.45□□□□□ -0.26
SDF2-207ENST00000588472 HSPA1LP34931 641 aa13.45□□□□□ -0.26
SDF2-207ENST00000588472 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
SDF2-207ENST00000588472 DEPDC5O75140 1603 aa13.44□□□□□ -0.26
SDF2-207ENST00000588472 NLRP1Q9C000 1473 aa13.43□□□□□ -0.26
SDF2-207ENST00000588472 ANKLE2Q86XL3 938 aa13.43□□□□□ -0.26
SDF2-207ENST00000588472 UGGT1Q9NYU2 1555 aa13.43□□□□□ -0.26
SDF2-207ENST00000588472 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
SDF2-207ENST00000588472 ROCK1Q13464 1354 aa13.42□□□□□ -0.26
SDF2-207ENST00000588472 MED1Q15648 1581 aaPredicted RBP13.41□□□□□ -0.26
SDF2-207ENST00000588472 ARHGAP31Q2M1Z3 1444 aa13.4□□□□□ -0.26
SDF2-207ENST00000588472 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
SDF2-207ENST00000588472 CPS1P31327 1500 aa13.39□□□□□ -0.27
SDF2-207ENST00000588472 IDI1Q13907 227 aa13.39□□□□□ -0.27
SDF2-207ENST00000588472 LMTK2Q8IWU2 1503 aa13.39□□□□□ -0.27
SDF2-207ENST00000588472 VWDEQ8N2E2 1590 aa13.38□□□□□ -0.27
SDF2-207ENST00000588472 NUP155O75694 1391 aa13.38□□□□□ -0.27
SDF2-207ENST00000588472 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
SDF2-207ENST00000588472 EFCAB6Q5THR3 1501 aa13.37□□□□□ -0.27
SDF2-207ENST00000588472 CHGAP10645 457 aaKnown RBP13.36□□□□□ -0.27
SDF2-207ENST00000588472 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
SDF2-207ENST00000588472 EID1Q9Y6B2 187 aa13.35□□□□□ -0.27
SDF2-207ENST00000588472 UBR1Q8IWV7 1749 aa13.35□□□□□ -0.27
SDF2-207ENST00000588472 PIK3C2BO00750 1634 aa13.35□□□□□ -0.27
SDF2-207ENST00000588472 UNC13BO14795 1591 aa13.34□□□□□ -0.27
SDF2-207ENST00000588472 NEURL4Q96JN8 1562 aa13.34□□□□□ -0.27
SDF2-207ENST00000588472 NPHP4O75161 1426 aaPredicted RBP13.34□□□□□ -0.27
SDF2-207ENST00000588472 LTKP29376 864 aa13.34□□□□□ -0.27
SDF2-207ENST00000588472 TRIM52Q96A61 297 aa13.34□□□□□ -0.27
SDF2-207ENST00000588472 SYNMO15061 1565 aa13.33□□□□□ -0.28
SDF2-207ENST00000588472 BCANQ96GW7 911 aa13.33□□□□□ -0.28
SDF2-207ENST00000588472 SLC52A1Q9NWF4 448 aa13.33□□□□□ -0.28
SDF2-207ENST00000588472 TET3O43151 1660 aa13.33□□□□□ -0.28
SDF2-207ENST00000588472 NOS1P29475 1434 aa13.32□□□□□ -0.28
SDF2-207ENST00000588472 NAIPQ13075 1403 aa13.3□□□□□ -0.28
SDF2-207ENST00000588472 RPRD2Q5VT52 1461 aaKnown RBP13.3□□□□□ -0.28
SDF2-207ENST00000588472 SCAF11Q99590 1463 aaKnown RBP13.3□□□□□ -0.28
SDF2-207ENST00000588472 IQGAP3Q86VI3 1631 aa13.3□□□□□ -0.28
SDF2-207ENST00000588472 GCC2Q8IWJ2 1684 aa13.3□□□□□ -0.28
SDF2-207ENST00000588472 TMEM2Q9UHN6 1383 aa13.3□□□□□ -0.28
SDF2-207ENST00000588472 MED14O60244 1454 aa13.29□□□□□ -0.28
SDF2-207ENST00000588472 E9PCH4 1651 aa13.29□□□□□ -0.28
SDF2-207ENST00000588472 IQGAP1P46940 1657 aa13.29□□□□□ -0.28
SDF2-207ENST00000588472 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
SDF2-207ENST00000588472 SLIT1O75093 1534 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms