RNA–Protein interactions for RNA: ENST00000588276.5

BECN1-208, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-208ENST00000588276 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
BECN1-208ENST00000588276 PPP4R3BQ5MIZ7 849 aa13.85□□□□□ -0.19
BECN1-208ENST00000588276 VARS2Q5ST30 1063 aaKnown RBP13.85□□□□□ -0.19
BECN1-208ENST00000588276 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
BECN1-208ENST00000588276 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
BECN1-208ENST00000588276 OSBPP22059 807 aa13.84□□□□□ -0.19
BECN1-208ENST00000588276 FBXW7Q969H0 707 aa13.83□□□□□ -0.2
BECN1-208ENST00000588276 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
BECN1-208ENST00000588276 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
BECN1-208ENST00000588276 HS3ST6Q96QI5 342 aa13.82□□□□□ -0.2
BECN1-208ENST00000588276 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
BECN1-208ENST00000588276 PRIM1P49642 420 aaKnown RBP13.8□□□□□ -0.2
BECN1-208ENST00000588276 EN1Q05925 392 aaPredicted RBP13.8□□□□□ -0.2
BECN1-208ENST00000588276 POTEB3A0JP26 581 aa13.79□□□□□ -0.2
BECN1-208ENST00000588276 POTEBQ6S5H4 581 aa13.79□□□□□ -0.2
BECN1-208ENST00000588276 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
BECN1-208ENST00000588276 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
BECN1-208ENST00000588276 HOMEZQ8IX15 550 aa13.76□□□□□ -0.21
BECN1-208ENST00000588276 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
BECN1-208ENST00000588276 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
BECN1-208ENST00000588276 MAP3K7O43318 606 aa13.75□□□□□ -0.21
BECN1-208ENST00000588276 RBM26Q5T8P6 1007 aaKnown RBP13.75□□□□□ -0.21
BECN1-208ENST00000588276 ZNF687Q8N1G0 1237 aa13.75□□□□□ -0.21
BECN1-208ENST00000588276 POTEMA6NI47 508 aa13.73□□□□□ -0.21
BECN1-208ENST00000588276 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
BECN1-208ENST00000588276 TSR1Q2NL82 804 aaKnown RBP13.71□□□□□ -0.21
BECN1-208ENST00000588276 PTPREP23469 700 aa13.7□□□□□ -0.22
BECN1-208ENST00000588276 C6orf132Q5T0Z8 1188 aa13.7□□□□□ -0.22
BECN1-208ENST00000588276 PBX2P40425 430 aa13.69□□□□□ -0.22
BECN1-208ENST00000588276 POTEEQ6S8J3 1075 aa13.68□□□□□ -0.22
BECN1-208ENST00000588276 CDHR5Q9HBB8 845 aa13.68□□□□□ -0.22
BECN1-208ENST00000588276 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
BECN1-208ENST00000588276 KCNK17Q96T54 332 aa13.67□□□□□ -0.22
BECN1-208ENST00000588276 NUTM2FA1L443 756 aa13.66□□□□□ -0.22
BECN1-208ENST00000588276 ARHGAP33O14559 1287 aa13.66□□□□□ -0.22
BECN1-208ENST00000588276 GPIHBP1Q8IV16 184 aa13.66□□□□□ -0.22
BECN1-208ENST00000588276 KCNH8Q96L42 1107 aa13.65□□□□□ -0.22
BECN1-208ENST00000588276 NEUROD2Q15784 382 aa13.64□□□□□ -0.23
BECN1-208ENST00000588276 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
BECN1-208ENST00000588276 PSEN2P49810 448 aa13.63□□□□□ -0.23
BECN1-208ENST00000588276 AXIN2Q9Y2T1 843 aa13.63□□□□□ -0.23
BECN1-208ENST00000588276 COL9A1P20849 921 aa13.62□□□□□ -0.23
BECN1-208ENST00000588276 CERKQ8TCT0 537 aa13.62□□□□□ -0.23
BECN1-208ENST00000588276 GPR37O15354 613 aa13.61□□□□□ -0.23
BECN1-208ENST00000588276 PTGDRQ13258 359 aa13.61□□□□□ -0.23
BECN1-208ENST00000588276 NPDC1Q9NQX5 325 aaPredicted RBP13.61□□□□□ -0.23
BECN1-208ENST00000588276 FCHSD2O94868 740 aa13.6□□□□□ -0.23
BECN1-208ENST00000588276 SLC24A3Q9HC58 644 aa13.59□□□□□ -0.23
BECN1-208ENST00000588276 DMRTA1Q5VZB9 504 aa13.57□□□□□ -0.24
BECN1-208ENST00000588276 CDAN1Q8IWY9 1227 aa13.57□□□□□ -0.24
BECN1-208ENST00000588276 HIC1Q14526 733 aa13.55□□□□□ -0.24
BECN1-208ENST00000588276 ZBED2Q9BTP6 218 aa13.55□□□□□ -0.24
BECN1-208ENST00000588276 KRTAP3-3Q9BYR6 98 aa13.55□□□□□ -0.24
BECN1-208ENST00000588276 KRTAP3-2Q9BYR7 98 aa13.55□□□□□ -0.24
BECN1-208ENST00000588276 LSM11P83369 360 aaKnown RBP eCLIP13.54□□□□□ -0.24
BECN1-208ENST00000588276 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
BECN1-208ENST00000588276 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
BECN1-208ENST00000588276 PRSS12P56730 875 aa13.53□□□□□ -0.24
BECN1-208ENST00000588276 SLC4A5Q9BY07 1137 aa13.53□□□□□ -0.24
BECN1-208ENST00000588276 GNPATO15228 680 aa13.52□□□□□ -0.25
BECN1-208ENST00000588276 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
BECN1-208ENST00000588276 PROX2Q3B8N5 592 aa13.5□□□□□ -0.25
BECN1-208ENST00000588276 PADI6Q6TGC4 694 aa13.5□□□□□ -0.25
BECN1-208ENST00000588276 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
BECN1-208ENST00000588276 TK2O00142 265 aa13.49□□□□□ -0.25
BECN1-208ENST00000588276 ONECUT3O60422 494 aaPredicted RBP13.48□□□□□ -0.25
BECN1-208ENST00000588276 ZMYND10O75800 440 aa13.48□□□□□ -0.25
BECN1-208ENST00000588276 TTC13Q8NBP0 860 aa13.48□□□□□ -0.25
BECN1-208ENST00000588276 PCDH10Q9P2E7 1040 aa13.48□□□□□ -0.25
BECN1-208ENST00000588276 VPS9D1Q9Y2B5 631 aa13.48□□□□□ -0.25
BECN1-208ENST00000588276 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
BECN1-208ENST00000588276 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
BECN1-208ENST00000588276 ADGRD1Q6QNK2 874 aa13.46□□□□□ -0.25
BECN1-208ENST00000588276 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
BECN1-208ENST00000588276 FAM198AQ9UFP1 575 aa13.46□□□□□ -0.25
BECN1-208ENST00000588276 FECHP22830 423 aa13.45□□□□□ -0.26
BECN1-208ENST00000588276 BARGINQ6ZT62 677 aa13.45□□□□□ -0.26
BECN1-208ENST00000588276 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
BECN1-208ENST00000588276 RABGEF1Q9UJ41 708 aa13.43□□□□□ -0.26
BECN1-208ENST00000588276 MAP2K5Q13163 448 aa13.42□□□□□ -0.26
BECN1-208ENST00000588276 PACS2Q86VP3 889 aa13.42□□□□□ -0.26
BECN1-208ENST00000588276 KIAA1468Q9P260 1216 aa13.42□□□□□ -0.26
BECN1-208ENST00000588276 NBPF26B4DH59 902 aa13.4□□□□□ -0.26
BECN1-208ENST00000588276 HRO43593 1189 aa13.39□□□□□ -0.27
BECN1-208ENST00000588276 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
BECN1-208ENST00000588276 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
BECN1-208ENST00000588276 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
BECN1-208ENST00000588276 ADGRG1Q9Y653 693 aa13.38□□□□□ -0.27
BECN1-208ENST00000588276 BHMG1C9JSJ3 638 aaPredicted RBP13.37□□□□□ -0.27
BECN1-208ENST00000588276 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
BECN1-208ENST00000588276 NBPF3Q9H094 633 aa13.37□□□□□ -0.27
BECN1-208ENST00000588276 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
BECN1-208ENST00000588276 TATDN2Q93075 761 aa13.36□□□□□ -0.27
BECN1-208ENST00000588276 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
BECN1-208ENST00000588276 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
BECN1-208ENST00000588276 C3orf80F5H4A9 247 aa13.35□□□□□ -0.27
BECN1-208ENST00000588276 IRF6O14896 467 aa13.35□□□□□ -0.27
BECN1-208ENST00000588276 NUDT18Q6ZVK8 323 aa13.35□□□□□ -0.27
BECN1-208ENST00000588276 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
BECN1-208ENST00000588276 FAM161AQ3B820 660 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms