RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 L3MBTL2Q969R5 705 aa23.66■■□□□ 1.38
NFIX-210ENST00000588228 KIDINS220Q9ULH0 1771 aa23.65■■□□□ 1.38
NFIX-210ENST00000588228 EIF2AK4Q9P2K8 1649 aaKnown RBP23.63■■□□□ 1.37
NFIX-210ENST00000588228 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
NFIX-210ENST00000588228 HECW2Q9P2P5 1572 aa23.62■■□□□ 1.37
NFIX-210ENST00000588228 A2MP01023 1474 aa23.58■■□□□ 1.37
NFIX-210ENST00000588228 KANK1Q14678 1352 aa23.56■■□□□ 1.36
NFIX-210ENST00000588228 KIF3BO15066 747 aa23.56■■□□□ 1.36
NFIX-210ENST00000588228 ATP10AO60312 1499 aa23.56■■□□□ 1.36
NFIX-210ENST00000588228 RAPGEF3O95398 923 aa23.55■■□□□ 1.36
NFIX-210ENST00000588228 VWDEQ8N2E2 1590 aa23.55■■□□□ 1.36
NFIX-210ENST00000588228 PRDM15P57071 1507 aaPredicted RBP23.55■■□□□ 1.36
NFIX-210ENST00000588228 PLA2R1Q13018 1463 aa23.54■■□□□ 1.36
NFIX-210ENST00000588228 CCDC144AA2RUR9 1427 aa23.53■■□□□ 1.36
NFIX-210ENST00000588228 RICTORQ6R327 1708 aa23.53■■□□□ 1.36
NFIX-210ENST00000588228 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
NFIX-210ENST00000588228 FRMPD1Q5SYB0 1578 aa23.51■■□□□ 1.35
NFIX-210ENST00000588228 ABCA6Q8N139 1617 aa23.51■■□□□ 1.35
NFIX-210ENST00000588228 PPRC1Q5VV67 1664 aaKnown RBP23.5■■□□□ 1.35
NFIX-210ENST00000588228 TET3O43151 1660 aa23.48■■□□□ 1.35
NFIX-210ENST00000588228 RNF17Q9BXT8 1623 aaKnown RBP23.48■■□□□ 1.35
NFIX-210ENST00000588228 NBPF8Q3BBV2 869 aa23.48■■□□□ 1.35
NFIX-210ENST00000588228 DIP2CQ9Y2E4 1556 aa23.47■■□□□ 1.35
NFIX-210ENST00000588228 BCORL1Q5H9F3 1711 aa23.46■■□□□ 1.35
NFIX-210ENST00000588228 ZMYM4Q5VZL5 1548 aa23.46■■□□□ 1.35
NFIX-210ENST00000588228 E9PCH4 1651 aa23.45■■□□□ 1.34
NFIX-210ENST00000588228 LMTK2Q8IWU2 1503 aa23.45■■□□□ 1.34
NFIX-210ENST00000588228 UHRF1BP1Q6BDS2 1440 aa23.44■■□□□ 1.34
NFIX-210ENST00000588228 PTPRTO14522 1441 aa23.43■■□□□ 1.34
NFIX-210ENST00000588228 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
NFIX-210ENST00000588228 KIF13AQ9H1H9 1805 aa23.41■■□□□ 1.34
NFIX-210ENST00000588228 TRPM2O94759 1503 aa23.41■■□□□ 1.34
NFIX-210ENST00000588228 TSPOAP1O95153 1857 aa23.41■■□□□ 1.34
NFIX-210ENST00000588228 YEATS2Q9ULM3 1422 aa23.4■■□□□ 1.34
NFIX-210ENST00000588228 EIF4G2P78344 907 aaKnown RBP eCLIP23.39■■□□□ 1.342e-6■■■■■ 26.9
NFIX-210ENST00000588228 EFCAB6Q5THR3 1501 aa23.39■■□□□ 1.33
NFIX-210ENST00000588228 HIRIP3Q9BW71 556 aaPredicted RBP23.38■■□□□ 1.33
NFIX-210ENST00000588228 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
NFIX-210ENST00000588228 SPHKAPQ2M3C7 1700 aa23.36■■□□□ 1.33
NFIX-210ENST00000588228 DCAF11Q8TEB1 546 aa23.35■■□□□ 1.33
NFIX-210ENST00000588228 GGT6Q6P531 493 aa23.35■■□□□ 1.33
NFIX-210ENST00000588228 RALGAPBQ86X10 1494 aa23.34■■□□□ 1.33
NFIX-210ENST00000588228 ZNF326Q5BKZ1 582 aaKnown RBP23.33■■□□□ 1.33
NFIX-210ENST00000588228 SPATA31E1Q6ZUB1 1445 aa23.33■■□□□ 1.32
NFIX-210ENST00000588228 MIER1Q8N108 512 aa23.32■■□□□ 1.32
NFIX-210ENST00000588228 CEP152O94986 1710 aa23.31■■□□□ 1.32
NFIX-210ENST00000588228 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
NFIX-210ENST00000588228 KDM2AQ9Y2K7 1162 aa23.31■■□□□ 1.32
NFIX-210ENST00000588228 ABCC3O15438 1527 aa23.31■■□□□ 1.32
NFIX-210ENST00000588228 REREQ9P2R6 1566 aa23.3■■□□□ 1.32
NFIX-210ENST00000588228 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
NFIX-210ENST00000588228 PRAG1Q86YV5 1406 aa23.29■■□□□ 1.32
NFIX-210ENST00000588228 WASHC2CQ9Y4E1 1318 aa23.29■■□□□ 1.32
NFIX-210ENST00000588228 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
NFIX-210ENST00000588228 COL17A1Q9UMD9 1497 aaPredicted RBP23.27■■□□□ 1.32
NFIX-210ENST00000588228 NPATQ14207 1427 aa23.27■■□□□ 1.31
NFIX-210ENST00000588228 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
NFIX-210ENST00000588228 AGLP35573 1532 aa23.24■■□□□ 1.31
NFIX-210ENST00000588228 ZC3H13Q5T200 1668 aaKnown RBP23.24■■□□□ 1.31
NFIX-210ENST00000588228 STAC3Q96MF2 364 aa23.24■■□□□ 1.31
NFIX-210ENST00000588228 USP47Q96K76 1375 aa23.23■■□□□ 1.31
NFIX-210ENST00000588228 CAMSAP1Q5T5Y3 1602 aa23.22■■□□□ 1.31
NFIX-210ENST00000588228 ARHGAP31Q2M1Z3 1444 aa23.22■■□□□ 1.31
NFIX-210ENST00000588228 CNTLNQ9NXG0 1405 aa23.22■■□□□ 1.31
NFIX-210ENST00000588228 CARD11Q9BXL7 1154 aa23.21■■□□□ 1.31
NFIX-210ENST00000588228 ARHGEF40Q8TER5 1519 aa23.2■■□□□ 1.31
NFIX-210ENST00000588228 TRPM1Q7Z4N2 1603 aa23.2■■□□□ 1.3
NFIX-210ENST00000588228 ROCK2O75116 1388 aaKnown RBP23.19■■□□□ 1.3
NFIX-210ENST00000588228 WASHC2AQ641Q2 1341 aa23.19■■□□□ 1.3
NFIX-210ENST00000588228 UGGT1Q9NYU2 1555 aa23.18■■□□□ 1.3
NFIX-210ENST00000588228 GPRASP1Q5JY77 1395 aa23.17■■□□□ 1.3
NFIX-210ENST00000588228 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
NFIX-210ENST00000588228 NOS1P29475 1434 aa23.17■■□□□ 1.3
NFIX-210ENST00000588228 CCDC7Q96M83 1385 aa23.14■■□□□ 1.3
NFIX-210ENST00000588228 LAMC1P11047 1609 aa23.13■■□□□ 1.29
NFIX-210ENST00000588228 ADGRB3O60242 1522 aa23.12■■□□□ 1.29
NFIX-210ENST00000588228 MADDQ8WXG6 1647 aa23.12■■□□□ 1.29
NFIX-210ENST00000588228 KIF1BO60333 1816 aa23.11■■□□□ 1.29
NFIX-210ENST00000588228 C11orf95C9JLR9 678 aaPredicted RBP23.11■■□□□ 1.29
NFIX-210ENST00000588228 MYOM2P54296 1465 aa23.1■■□□□ 1.29
NFIX-210ENST00000588228 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
NFIX-210ENST00000588228 SIGLEC1Q9BZZ2 1709 aa23.08■■□□□ 1.29
NFIX-210ENST00000588228 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.29
NFIX-210ENST00000588228 SYNMO15061 1565 aa23.08■■□□□ 1.28
NFIX-210ENST00000588228 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
NFIX-210ENST00000588228 POLR1AO95602 1720 aaPredicted RBP23.07■■□□□ 1.28
NFIX-210ENST00000588228 PIK3C2BO00750 1634 aa23.07■■□□□ 1.28
NFIX-210ENST00000588228 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
NFIX-210ENST00000588228 ST20-MTHFSA0A0A6YYL1 179 aa23.04■■□□□ 1.28
NFIX-210ENST00000588228 TRHP20396 242 aaPredicted RBP23.03■■□□□ 1.28
NFIX-210ENST00000588228 SLC52A1Q9NWF4 448 aa23.03■■□□□ 1.28
NFIX-210ENST00000588228 IFT172Q9UG01 1749 aa23.03■■□□□ 1.28
NFIX-210ENST00000588228 ANP32CO43423 234 aa23.03■■□□□ 1.28
NFIX-210ENST00000588228 CHGAP10645 457 aaKnown RBP23.03■■□□□ 1.28
NFIX-210ENST00000588228 RPGRIP1LQ68CZ1 1315 aa23.02■■□□□ 1.28
NFIX-210ENST00000588228 NRXN1Q9ULB1 1477 aa23.02■■□□□ 1.28
NFIX-210ENST00000588228 PREX1Q8TCU6 1659 aa23.01■■□□□ 1.27
NFIX-210ENST00000588228 KIAA1210Q9ULL0 1709 aa23■■□□□ 1.27
NFIX-210ENST00000588228 ERVK-7P63135 1459 aa23■■□□□ 1.27
NFIX-210ENST00000588228 ADGRF5Q8IZF2 1346 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms