RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 FAM135AQ9P2D6 1515 aa23.28■■□□□ 1.32
KDM4B-204ENST00000588166 CAMSAP2Q08AD1 1489 aa23.27■■□□□ 1.32
KDM4B-204ENST00000588166 NCOA2Q15596 1464 aa23.27■■□□□ 1.32
KDM4B-204ENST00000588166 KDM5DQ9BY66 1539 aa23.26■■□□□ 1.31
KDM4B-204ENST00000588166 NEURL4Q96JN8 1562 aa23.26■■□□□ 1.31
KDM4B-204ENST00000588166 POLR1AO95602 1720 aaPredicted RBP23.25■■□□□ 1.31
KDM4B-204ENST00000588166 PZPP20742 1482 aa23.25■■□□□ 1.31
KDM4B-204ENST00000588166 UBAP1LF5GYI3 381 aa23.24■■□□□ 1.31
KDM4B-204ENST00000588166 FBXO31Q5XUX0 539 aaPredicted RBP23.24■■□□□ 1.31
KDM4B-204ENST00000588166 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
KDM4B-204ENST00000588166 TNRQ92752 1358 aa23.23■■□□□ 1.31
KDM4B-204ENST00000588166 KIF3BO15066 747 aa23.22■■□□□ 1.31
KDM4B-204ENST00000588166 ARHGEF5Q12774 1597 aa23.22■■□□□ 1.31
KDM4B-204ENST00000588166 RSPH4AQ5TD94 716 aa23.19■■□□□ 1.3
KDM4B-204ENST00000588166 WASHC2CQ9Y4E1 1318 aa23.15■■□□□ 1.3
KDM4B-204ENST00000588166 CPS1P31327 1500 aa23.15■■□□□ 1.3
KDM4B-204ENST00000588166 MIA2Q96PC5 1412 aa23.15■■□□□ 1.3
KDM4B-204ENST00000588166 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
KDM4B-204ENST00000588166 VWDEQ8N2E2 1590 aa23.14■■□□□ 1.3
KDM4B-204ENST00000588166 NLRP1Q9C000 1473 aa23.14■■□□□ 1.29
KDM4B-204ENST00000588166 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.29
KDM4B-204ENST00000588166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.13■■□□□ 1.29
KDM4B-204ENST00000588166 MED14O60244 1454 aa23.12■■□□□ 1.29
KDM4B-204ENST00000588166 DEPDC5O75140 1603 aa23.12■■□□□ 1.29
KDM4B-204ENST00000588166 MAST1Q9Y2H9 1570 aa23.12■■□□□ 1.29
KDM4B-204ENST00000588166 UGGT1Q9NYU2 1555 aa23.11■■□□□ 1.29
KDM4B-204ENST00000588166 LRRC9Q6ZRR7 1453 aa23.11■■□□□ 1.29
KDM4B-204ENST00000588166 ABCC3O15438 1527 aa23.09■■□□□ 1.29
KDM4B-204ENST00000588166 ANKLE2Q86XL3 938 aa23.08■■□□□ 1.29
KDM4B-204ENST00000588166 THEMISQ8N1K5 641 aaPredicted RBP23.08■■□□□ 1.29
KDM4B-204ENST00000588166 ZC3H13Q5T200 1668 aaKnown RBP23.08■■□□□ 1.29
KDM4B-204ENST00000588166 MROH1Q8NDA8 1641 aa23.08■■□□□ 1.28
KDM4B-204ENST00000588166 ALKQ9UM73 1620 aa23.08■■□□□ 1.28
KDM4B-204ENST00000588166 TSPY4P0CV99 314 aa23.07■■□□□ 1.28
KDM4B-204ENST00000588166 TSPY10P0CW01 314 aa23.07■■□□□ 1.28
KDM4B-204ENST00000588166 EIF2AK4Q9P2K8 1649 aaKnown RBP23.07■■□□□ 1.28
KDM4B-204ENST00000588166 MAP3K1Q13233 1512 aa23.07■■□□□ 1.28
KDM4B-204ENST00000588166 NPHP4O75161 1426 aaPredicted RBP23.07■■□□□ 1.28
KDM4B-204ENST00000588166 HSPA1LP34931 641 aa23.05■■□□□ 1.28
KDM4B-204ENST00000588166 IQGAP1P46940 1657 aa23.05■■□□□ 1.28
KDM4B-204ENST00000588166 STRCP1A6NGW2 1772 aa23.04■■□□□ 1.28
KDM4B-204ENST00000588166 ERVK-7P63135 1459 aa23.03■■□□□ 1.28
KDM4B-204ENST00000588166 TOM1O60784 492 aa23.02■■□□□ 1.28
KDM4B-204ENST00000588166 MED1Q15648 1581 aaPredicted RBP23.01■■□□□ 1.27
KDM4B-204ENST00000588166 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
KDM4B-204ENST00000588166 CEP152O94986 1710 aa23■■□□□ 1.27
KDM4B-204ENST00000588166 APLP2Q06481 763 aa22.99■■□□□ 1.27
KDM4B-204ENST00000588166 KANK4Q5T7N3 995 aaPredicted RBP22.99■■□□□ 1.27
KDM4B-204ENST00000588166 UBR1Q8IWV7 1749 aa22.98■■□□□ 1.27
KDM4B-204ENST00000588166 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
KDM4B-204ENST00000588166 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
KDM4B-204ENST00000588166 CFAP65Q6ZU64 1925 aaKnown RBP22.96■■□□□ 1.27
KDM4B-204ENST00000588166 LRRC7Q96NW7 1537 aa22.95■■□□□ 1.26
KDM4B-204ENST00000588166 DUOX2Q9NRD8 1548 aa22.95■■□□□ 1.26
KDM4B-204ENST00000588166 SYNMO15061 1565 aa22.93■■□□□ 1.26
KDM4B-204ENST00000588166 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
KDM4B-204ENST00000588166 CROCC2H7BZ55 1655 aa22.91■■□□□ 1.26
KDM4B-204ENST00000588166 ARHGAP23Q9P227 1491 aa22.91■■□□□ 1.26
KDM4B-204ENST00000588166 SLIT1O75093 1534 aa22.9■■□□□ 1.26
KDM4B-204ENST00000588166 ARHGAP31Q2M1Z3 1444 aa22.9■■□□□ 1.26
KDM4B-204ENST00000588166 SCAF11Q99590 1463 aaKnown RBP22.89■■□□□ 1.25
KDM4B-204ENST00000588166 ABCC5O15440 1437 aa22.88■■□□□ 1.25
KDM4B-204ENST00000588166 ERBINQ96RT1 1412 aa22.87■■□□□ 1.25
KDM4B-204ENST00000588166 KIF15Q9NS87 1388 aa22.87■■□□□ 1.25
KDM4B-204ENST00000588166 LTKP29376 864 aa22.86■■□□□ 1.25
KDM4B-204ENST00000588166 XIRP1Q702N8 1843 aaKnown RBP22.85■■□□□ 1.25
KDM4B-204ENST00000588166 PTPN23Q9H3S7 1636 aa22.84■■□□□ 1.25
KDM4B-204ENST00000588166 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
KDM4B-204ENST00000588166 DAPK1P53355 1430 aa22.8■■□□□ 1.24
KDM4B-204ENST00000588166 TXNDC2Q86VQ3 553 aa22.79■■□□□ 1.24
KDM4B-204ENST00000588166 RRP7BPQ9NSQ0 103 aa22.79■■□□□ 1.24
KDM4B-204ENST00000588166 KDM5AP29375 1690 aaKnown RBP22.78■■□□□ 1.24
KDM4B-204ENST00000588166 LMTK2Q8IWU2 1503 aa22.77■■□□□ 1.24
KDM4B-204ENST00000588166 TMEM2Q9UHN6 1383 aa22.76■■□□□ 1.23
KDM4B-204ENST00000588166 FGD6Q6ZV73 1430 aa22.74■■□□□ 1.23
KDM4B-204ENST00000588166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.23
KDM4B-204ENST00000588166 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
KDM4B-204ENST00000588166 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
KDM4B-204ENST00000588166 EID1Q9Y6B2 187 aa22.72■■□□□ 1.23
KDM4B-204ENST00000588166 TET3O43151 1660 aa22.71■■□□□ 1.23
KDM4B-204ENST00000588166 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
KDM4B-204ENST00000588166 IDI1Q13907 227 aa22.7■■□□□ 1.22
KDM4B-204ENST00000588166 KANK1Q14678 1352 aa22.7■■□□□ 1.22
KDM4B-204ENST00000588166 NOS1P29475 1434 aa22.7■■□□□ 1.22
KDM4B-204ENST00000588166 ANKRD30AQ9BXX3 1397 aa22.67■■□□□ 1.22
KDM4B-204ENST00000588166 FAM135BQ49AJ0 1406 aa22.66■■□□□ 1.22
KDM4B-204ENST00000588166 RGS17Q9UGC6 210 aaPredicted RBP22.66■■□□□ 1.22
KDM4B-204ENST00000588166 ADGRB3O60242 1522 aa22.66■■□□□ 1.22
KDM4B-204ENST00000588166 ADGRL2O95490 1459 aa22.66■■□□□ 1.22
KDM4B-204ENST00000588166 TMEM94Q12767 1356 aa22.65■■□□□ 1.22
KDM4B-204ENST00000588166 CHIC2Q9UKJ5 165 aa22.65■■□□□ 1.22
KDM4B-204ENST00000588166 NWD1Q149M9 1564 aa22.63■■□□□ 1.21
KDM4B-204ENST00000588166 KCNA6P17658 529 aa22.63■■□□□ 1.21
KDM4B-204ENST00000588166 STAG3Q9UJ98 1225 aa22.63■■□□□ 1.21
KDM4B-204ENST00000588166 SLC26A8Q96RN1 970 aa22.6■■□□□ 1.21
KDM4B-204ENST00000588166 ROBO1Q9Y6N7 1651 aa22.6■■□□□ 1.21
KDM4B-204ENST00000588166 NKTRP30414 1462 aaKnown RBP22.59■■□□□ 1.21
KDM4B-204ENST00000588166 MYO5BQ9ULV0 1848 aa22.58■■□□□ 1.21
KDM4B-204ENST00000588166 RPRD2Q5VT52 1461 aaKnown RBP22.58■■□□□ 1.2
KDM4B-204ENST00000588166 SLC52A1Q9NWF4 448 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms