RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077		A0A0U1RQG5	324 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	CCDC184	Q52MB2	194 aa		12.86	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	ARHGEF12	Q9NZN5	1544 aa		12.85	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	COL17A1	Q9UMD9	1497 aa	Predicted RBP	12.85	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	RRP7BP	Q9NSQ0	103 aa		12.85	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	PPRC1	Q5VV67	1664 aa	Known RBP	12.85	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	PLPPR3	Q6T4P5	718 aa		12.85	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	ABCC1	P33527	1531 aa		12.84	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	SETD5	Q9C0A6	1442 aa		12.84	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	KDM6B	O15054	1643 aa		12.84	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	POGZ	Q7Z3K3	1410 aa		12.84	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	ZNF518A	Q6AHZ1	1483 aa		12.84	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	CCDC141	Q6ZP82	1450 aa		12.84	□□□□□ -0.35
CACNA2D4-223	ENST00000588077	TCOF1	Q13428	1488 aa	Known RBP	12.83	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	MBD5	Q9P267	1494 aa		12.83	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.83	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	ABCC5	O15440	1437 aa		12.82	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	DAPK1	P53355	1430 aa		12.82	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	FAM9B	Q8IZU0	186 aa		12.82	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	SENP3-EIF4A1	A0A087X0R7	540 aa		12.82	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.81	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	C9orf84	Q5VXU9	1444 aa		12.81	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	ANP32A	P39687	249 aa	Known RBP	12.8	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	IPO9	Q96P70	1041 aa	Known RBP	12.8	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	LAS1L	Q9Y4W2	734 aa	Known RBP	12.8	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	ANKRD30A	Q9BXX3	1397 aa		12.8	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	RSPH6A	Q9H0K4	717 aa		12.8	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	NPM2	Q86SE8	214 aa	Known RBP	12.79	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	PDE4C	Q08493	712 aa		12.78	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	MLEC	Q14165	292 aa		12.78	□□□□□ -0.36
CACNA2D4-223	ENST00000588077	PTPRK	Q15262	1439 aa		12.77	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	YEATS2	Q9ULM3	1422 aa		12.77	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	KIF15	Q9NS87	1388 aa		12.76	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	ARHGEF5	Q12774	1597 aa		12.76	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	DNMT1	P26358	1616 aa	Known RBP	12.75	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	KIF3B	O15066	747 aa		12.75	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	CNGB1	Q14028	1251 aa	Predicted RBP	12.75	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.75	□□□□□ -0.37	7e-9	■□□□□ 9.3
CACNA2D4-223	ENST00000588077	BRPF3	Q9ULD4	1205 aa		12.75	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	GGT6	Q6P531	493 aa		12.74	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	MLH3	Q9UHC1	1453 aa		12.74	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	ATP7A	Q04656	1500 aa		12.74	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	NEFM	P07197	916 aa		12.73	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	ZFYVE16	Q7Z3T8	1539 aa		12.73	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	TONSL	Q96HA7	1378 aa		12.73	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.73	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	MAGI2	Q86UL8	1455 aa		12.73	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	NCOA1	Q15788	1441 aa		12.73	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	HECW2	Q9P2P5	1572 aa		12.72	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	RICTOR	Q6R327	1708 aa		12.72	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	FRMPD1	Q5SYB0	1578 aa		12.72	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	C11orf95	C9JLR9	678 aa	Predicted RBP	12.72	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	ESF1	Q9H501	851 aa	Known RBP	12.72	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	SHANK2	Q9UPX8	1470 aa		12.72	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	KDM5C	P41229	1560 aa		12.71	□□□□□ -0.37
CACNA2D4-223	ENST00000588077	ATP10A	O60312	1499 aa		12.71	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	WASHC2A	Q641Q2	1341 aa		12.7	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	RBM10	P98175	930 aa	Known RBP	12.7	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	MRS2	Q9HD23	443 aa		12.7	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	A2M	P01023	1474 aa		12.7	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	ROCK1	Q13464	1354 aa		12.7	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	DHX29	Q7Z478	1369 aa	Known RBP	12.7	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	FGD1	P98174	961 aa		12.7	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	AEBP2	Q6ZN18	517 aa	Predicted RBP	12.69	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	ANKRD50	Q9ULJ7	1429 aa		12.69	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	ZMYM4	Q5VZL5	1548 aa		12.69	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	HFM1	A2PYH4	1435 aa		12.68	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	KIDINS220	Q9ULH0	1771 aa		12.67	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	PDIA4	P13667	645 aa	Known RBP	12.67	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	INO80	Q9ULG1	1556 aa	Predicted RBP	12.67	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	ADGRL2	O95490	1459 aa		12.67	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	HSPA5	P11021	654 aa	Known RBP	12.66	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	MAST1	Q9Y2H9	1570 aa		12.66	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	NAIP	Q13075	1403 aa		12.66	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	DIP2C	Q9Y2E4	1556 aa		12.66	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	AAMP	Q13685	434 aa		12.65	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	ARHGEF40	Q8TER5	1519 aa		12.65	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	CROCC2	H7BZ55	1655 aa		12.65	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	ABCA6	Q8N139	1617 aa		12.65	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	DUOX2	Q9NRD8	1548 aa		12.65	□□□□□ -0.38
CACNA2D4-223	ENST00000588077	ZBED9	Q6R2W3	1325 aa		12.64	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	WASHC2C	Q9Y4E1	1318 aa		12.64	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	NUP155	O75694	1391 aa		12.63	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	KANK1	Q14678	1352 aa		12.63	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	ADGB	Q8N7X0	1667 aa		12.62	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	PLXNC1	O60486	1568 aa		12.62	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.62	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.62	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	ERBIN	Q96RT1	1412 aa		12.62	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	GCC2	Q8IWJ2	1684 aa		12.61	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.6	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.59	□□□□□ -0.39
CACNA2D4-223	ENST00000588077	USP35	Q9P2H5	1018 aa		12.58	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	SKAP1	Q86WV1	359 aa		12.57	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	SLC4A3	P48751	1232 aa		12.56	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	AGL	P35573	1532 aa		12.55	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	CNTLN	Q9NXG0	1405 aa		12.55	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	CEBPA	P49715	358 aa	Predicted RBP	12.55	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	PPP6R1	Q9UPN7	881 aa		12.55	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	PKD2	Q13563	968 aa		12.55	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms