RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ZNF142P52746 1687 aaPredicted RBP22.42■■□□□ 1.18
ERCC1-205ENST00000587888 PLA2R1Q13018 1463 aa22.41■■□□□ 1.18
ERCC1-205ENST00000587888 LRRC9Q6ZRR7 1453 aa22.41■■□□□ 1.18
ERCC1-205ENST00000587888 A2ML1A8K2U0 1454 aa22.39■■□□□ 1.17
ERCC1-205ENST00000587888 TNRQ92752 1358 aa22.38■■□□□ 1.17
ERCC1-205ENST00000587888 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
ERCC1-205ENST00000587888 TCOF1Q13428 1488 aaKnown RBP22.37■■□□□ 1.17
ERCC1-205ENST00000587888 ARHGEF5Q12774 1597 aa22.36■■□□□ 1.17
ERCC1-205ENST00000587888 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
ERCC1-205ENST00000587888 IQSEC2Q5JU85 1478 aa22.35■■□□□ 1.17
ERCC1-205ENST00000587888 UBAP1LF5GYI3 381 aa22.35■■□□□ 1.17
ERCC1-205ENST00000587888 KDM5DQ9BY66 1539 aa22.35■■□□□ 1.17
ERCC1-205ENST00000587888 PZPP20742 1482 aa22.33■■□□□ 1.16
ERCC1-205ENST00000587888 MIA2Q96PC5 1412 aa22.31■■□□□ 1.16
ERCC1-205ENST00000587888 THEMISQ8N1K5 641 aaPredicted RBP22.3■■□□□ 1.16
ERCC1-205ENST00000587888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.167e-7■■■■■ 52.8
ERCC1-205ENST00000587888 ANKLE2Q86XL3 938 aa22.29■■□□□ 1.16
ERCC1-205ENST00000587888 ILDR2Q71H61 639 aa22.28■■□□□ 1.16
ERCC1-205ENST00000587888 MYOM3Q5VTT5 1437 aa22.28■■□□□ 1.16
ERCC1-205ENST00000587888 MAP3K1Q13233 1512 aa22.27■■□□□ 1.16
ERCC1-205ENST00000587888 FAM135AQ9P2D6 1515 aa22.27■■□□□ 1.16
ERCC1-205ENST00000587888 APLP2Q06481 763 aa22.27■■□□□ 1.16
ERCC1-205ENST00000587888 MAST1Q9Y2H9 1570 aa22.25■■□□□ 1.15
ERCC1-205ENST00000587888 POLR1AO95602 1720 aaPredicted RBP22.23■■□□□ 1.15
ERCC1-205ENST00000587888 NLRP1Q9C000 1473 aa22.22■■□□□ 1.15
ERCC1-205ENST00000587888 UGGT1Q9NYU2 1555 aa22.22■■□□□ 1.15
ERCC1-205ENST00000587888 RRP7BPQ9NSQ0 103 aa22.22■■□□□ 1.15
ERCC1-205ENST00000587888 SCAF1Q9H7N4 1312 aaKnown RBP22.21■■□□□ 1.15
ERCC1-205ENST00000587888 ABCC3O15438 1527 aa22.21■■□□□ 1.15
ERCC1-205ENST00000587888 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
ERCC1-205ENST00000587888 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.15
ERCC1-205ENST00000587888 PIP4K2BP78356 416 aa22.19■■□□□ 1.14
ERCC1-205ENST00000587888 SHANK2Q9UPX8 1470 aa22.18■■□□□ 1.14
ERCC1-205ENST00000587888 CFAP65Q6ZU64 1925 aaKnown RBP22.18■■□□□ 1.14
ERCC1-205ENST00000587888 NPHP4O75161 1426 aaPredicted RBP22.17■■□□□ 1.14
ERCC1-205ENST00000587888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.17■■□□□ 1.145e-7■■□□□ 12.5
ERCC1-205ENST00000587888 EIF2AK4Q9P2K8 1649 aaKnown RBP22.17■■□□□ 1.14
ERCC1-205ENST00000587888 DUOX2Q9NRD8 1548 aa22.16■■□□□ 1.14
ERCC1-205ENST00000587888 TOM1O60784 492 aa22.16■■□□□ 1.14
ERCC1-205ENST00000587888 SPATA31D1Q6ZQQ2 1576 aa22.16■■□□□ 1.14
ERCC1-205ENST00000587888 ZC3H13Q5T200 1668 aaKnown RBP22.15■■□□□ 1.14
ERCC1-205ENST00000587888 ABCC5O15440 1437 aa22.14■■□□□ 1.14
ERCC1-205ENST00000587888 KIF15Q9NS87 1388 aa22.14■■□□□ 1.14
ERCC1-205ENST00000587888 CHIC2Q9UKJ5 165 aa22.14■■□□□ 1.13
ERCC1-205ENST00000587888 CPS1P31327 1500 aa22.14■■□□□ 1.13
ERCC1-205ENST00000587888 ERVK-7P63135 1459 aa22.14■■□□□ 1.13
ERCC1-205ENST00000587888 CEP152O94986 1710 aa22.14■■□□□ 1.13
ERCC1-205ENST00000587888 MROH1Q8NDA8 1641 aa22.13■■□□□ 1.13
ERCC1-205ENST00000587888 MED14O60244 1454 aa22.12■■□□□ 1.13
ERCC1-205ENST00000587888 SOCS7O14512 581 aa22.12■■□□□ 1.13
ERCC1-205ENST00000587888 PTPN23Q9H3S7 1636 aa22.12■■□□□ 1.13
ERCC1-205ENST00000587888 DEPDC5O75140 1603 aa22.11■■□□□ 1.13
ERCC1-205ENST00000587888 HSPA1LP34931 641 aa22.1■■□□□ 1.13
ERCC1-205ENST00000587888 VWDEQ8N2E2 1590 aa22.1■■□□□ 1.13
ERCC1-205ENST00000587888 DAPK1P53355 1430 aa22.08■■□□□ 1.13
ERCC1-205ENST00000587888 IQGAP1P46940 1657 aa22.07■■□□□ 1.12
ERCC1-205ENST00000587888 TXNDC2Q86VQ3 553 aa22.07■■□□□ 1.12
ERCC1-205ENST00000587888 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
ERCC1-205ENST00000587888 FGD6Q6ZV73 1430 aa22.06■■□□□ 1.12
ERCC1-205ENST00000587888 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
ERCC1-205ENST00000587888 KANK1Q14678 1352 aa22.05■■□□□ 1.12
ERCC1-205ENST00000587888 LTKP29376 864 aa22.05■■□□□ 1.12
ERCC1-205ENST00000587888 STAG3Q9UJ98 1225 aa22.04■■□□□ 1.12
ERCC1-205ENST00000587888 ARHGAP31Q2M1Z3 1444 aa22.04■■□□□ 1.12
ERCC1-205ENST00000587888 UBR1Q8IWV7 1749 aa22.03■■□□□ 1.12
ERCC1-205ENST00000587888 ANKRD30AQ9BXX3 1397 aa22.03■■□□□ 1.12
ERCC1-205ENST00000587888 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
ERCC1-205ENST00000587888 PRDM15P57071 1507 aaPredicted RBP22.02■■□□□ 1.12
ERCC1-205ENST00000587888 EID1Q9Y6B2 187 aa22.02■■□□□ 1.12
ERCC1-205ENST00000587888 FAM50AQ14320 339 aaKnown RBP22.01■■□□□ 1.11
ERCC1-205ENST00000587888 SCAF11Q99590 1463 aaKnown RBP22■■□□□ 1.11
ERCC1-205ENST00000587888 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
ERCC1-205ENST00000587888 LRRC7Q96NW7 1537 aa21.98■■□□□ 1.11
ERCC1-205ENST00000587888 IDI1Q13907 227 aa21.98■■□□□ 1.11
ERCC1-205ENST00000587888 ARHGAP23Q9P227 1491 aa21.96■■□□□ 1.11
ERCC1-205ENST00000587888 SLIT1O75093 1534 aa21.95■■□□□ 1.1
ERCC1-205ENST00000587888 PIK3C2BO00750 1634 aa21.95■■□□□ 1.1
ERCC1-205ENST00000587888 ALKQ9UM73 1620 aa21.94■■□□□ 1.1
ERCC1-205ENST00000587888 TMEM2Q9UHN6 1383 aa21.93■■□□□ 1.1
ERCC1-205ENST00000587888 LMTK2Q8IWU2 1503 aa21.9■■□□□ 1.1
ERCC1-205ENST00000587888 SLC26A8Q96RN1 970 aa21.89■■□□□ 1.09
ERCC1-205ENST00000587888 SYNMO15061 1565 aa21.89■■□□□ 1.09
ERCC1-205ENST00000587888 MED1Q15648 1581 aaPredicted RBP21.88■■□□□ 1.09
ERCC1-205ENST00000587888 BCANQ96GW7 911 aa21.88■■□□□ 1.09
ERCC1-205ENST00000587888 EFCAB6Q5THR3 1501 aa21.88■■□□□ 1.09
ERCC1-205ENST00000587888 ADGRL2O95490 1459 aa21.86■■□□□ 1.09
ERCC1-205ENST00000587888 SLC52A1Q9NWF4 448 aa21.86■■□□□ 1.09
ERCC1-205ENST00000587888 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
ERCC1-205ENST00000587888 ANKRD50Q9ULJ7 1429 aa21.85■■□□□ 1.09
ERCC1-205ENST00000587888 NOS1P29475 1434 aa21.84■■□□□ 1.09
ERCC1-205ENST00000587888 RBM33Q96EV2 1170 aaKnown RBP21.84■■□□□ 1.09
ERCC1-205ENST00000587888 KCNA6P17658 529 aa21.83■■□□□ 1.09
ERCC1-205ENST00000587888 PROSER2Q86WR7 435 aaPredicted RBP21.83■■□□□ 1.09
ERCC1-205ENST00000587888 KDM5AP29375 1690 aaKnown RBP21.81■■□□□ 1.08
ERCC1-205ENST00000587888 XIRP1Q702N8 1843 aaKnown RBP21.8■■□□□ 1.08
ERCC1-205ENST00000587888 TMEM94Q12767 1356 aa21.79■■□□□ 1.08
ERCC1-205ENST00000587888 CHGAP10645 457 aaKnown RBP21.78■■□□□ 1.08
ERCC1-205ENST00000587888 ITGAEP38570 1179 aa21.78■■□□□ 1.08
ERCC1-205ENST00000587888 PPARGC1BQ86YN6 1023 aaKnown RBP21.78■■□□□ 1.08
ERCC1-205ENST00000587888 TET3O43151 1660 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms