RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 IQGAP3Q86VI3 1631 aa27.04■■□□□ 1.92
MBD1-216ENST00000587605 CCDC144AA2RUR9 1427 aa27.03■■□□□ 1.92
MBD1-216ENST00000587605 LAMC1P11047 1609 aa27.01■■□□□ 1.91
MBD1-216ENST00000587605 TRPM1Q7Z4N2 1603 aa27.01■■□□□ 1.91
MBD1-216ENST00000587605 DUOX2Q9NRD8 1548 aa27.01■■□□□ 1.91
MBD1-216ENST00000587605 E9PCH4 1651 aa27■■□□□ 1.91
MBD1-216ENST00000587605 PPP4R2Q9NY27 417 aa27■■□□□ 1.91
MBD1-216ENST00000587605 DCAF11Q8TEB1 546 aa26.98■■□□□ 1.91
MBD1-216ENST00000587605 PRAG1Q86YV5 1406 aa26.98■■□□□ 1.91
MBD1-216ENST00000587605 SMG6Q86US8 1419 aaKnown RBP26.98■■□□□ 1.91
MBD1-216ENST00000587605 MAGI2Q86UL8 1455 aa26.97■■□□□ 1.91
MBD1-216ENST00000587605 UHRF1BP1LA0JNW5 1464 aa26.97■■□□□ 1.91
MBD1-216ENST00000587605 ERBINQ96RT1 1412 aa26.96■■□□□ 1.91
MBD1-216ENST00000587605 ATP10AO60312 1499 aa26.96■■□□□ 1.91
MBD1-216ENST00000587605 EIF2AK4Q9P2K8 1649 aaKnown RBP26.95■■□□□ 1.9
MBD1-216ENST00000587605 RBM19Q9Y4C8 960 aaKnown RBP26.95■■□□□ 1.9
MBD1-216ENST00000587605 GPRASP1Q5JY77 1395 aa26.94■■□□□ 1.9
MBD1-216ENST00000587605 POLR3GLQ9BT43 218 aa26.94■■□□□ 1.9
MBD1-216ENST00000587605 KDM2AQ9Y2K7 1162 aa26.93■■□□□ 1.9
MBD1-216ENST00000587605 ST20-MTHFSA0A0A6YYL1 179 aa26.92■■□□□ 1.9
MBD1-216ENST00000587605 RALBP1Q15311 655 aa26.92■■□□□ 1.9
MBD1-216ENST00000587605 PLCH2O75038 1416 aa26.92■■□□□ 1.9
MBD1-216ENST00000587605 PLA2R1Q13018 1463 aa26.91■■□□□ 1.9
MBD1-216ENST00000587605 BRD4O60885 1362 aaPredicted RBP26.91■■□□□ 1.9
MBD1-216ENST00000587605 ERCC6L2Q5T890 1561 aa26.89■■□□□ 1.9
MBD1-216ENST00000587605 ZCCHC11Q5TAX3 1644 aaKnown RBP26.89■■□□□ 1.9
MBD1-216ENST00000587605 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
MBD1-216ENST00000587605 A2MP01023 1474 aa26.87■■□□□ 1.89
MBD1-216ENST00000587605 IRX6P78412 446 aaPredicted RBP26.87■■□□□ 1.89
MBD1-216ENST00000587605 PNISRQ8TF01 805 aaKnown RBP26.86■■□□□ 1.89
MBD1-216ENST00000587605 MYBBP1AQ9BQG0 1328 aaKnown RBP26.86■■□□□ 1.89
MBD1-216ENST00000587605 ABCC1P33527 1531 aa26.86■■□□□ 1.89
MBD1-216ENST00000587605 PRDM15P57071 1507 aaPredicted RBP26.86■■□□□ 1.89
MBD1-216ENST00000587605 ARAP3Q8WWN8 1544 aa26.86■■□□□ 1.89
MBD1-216ENST00000587605 TMC1Q8TDI8 760 aa26.85■■□□□ 1.89
MBD1-216ENST00000587605 NUDCQ9Y266 331 aa26.85■■□□□ 1.89
MBD1-216ENST00000587605 EFCAB2Q5VUJ9 269 aa26.84■■□□□ 1.89
MBD1-216ENST00000587605 ANP32EQ9BTT0 268 aa26.84■■□□□ 1.89
MBD1-216ENST00000587605 LRPPRCP42704 1394 aaKnown RBP26.84■■□□□ 1.89
MBD1-216ENST00000587605 RNF123Q5XPI4 1314 aa26.8■■□□□ 1.88
MBD1-216ENST00000587605 COL17A1Q9UMD9 1497 aaPredicted RBP26.8■■□□□ 1.88
MBD1-216ENST00000587605 WASHC2CQ9Y4E1 1318 aa26.79■■□□□ 1.88
MBD1-216ENST00000587605 RTEL1-TNFRSF6BF6WH68 1400 aa26.79■■□□□ 1.88
MBD1-216ENST00000587605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.77■■□□□ 1.88
MBD1-216ENST00000587605 RNF17Q9BXT8 1623 aaKnown RBP26.76■■□□□ 1.87
MBD1-216ENST00000587605 PARD3Q8TEW0 1356 aa26.75■■□□□ 1.87
MBD1-216ENST00000587605 FANCIQ9NVI1 1328 aa26.74■■□□□ 1.87
MBD1-216ENST00000587605 INSRP06213 1382 aa26.72■■□□□ 1.87
MBD1-216ENST00000587605 NLRP13Q86W25 1043 aa26.72■■□□□ 1.87
MBD1-216ENST00000587605 ZMYM4Q5VZL5 1548 aa26.71■■□□□ 1.87
MBD1-216ENST00000587605 RGL3Q3MIN7 710 aa26.71■■□□□ 1.87
MBD1-216ENST00000587605 STAC3Q96MF2 364 aa26.71■■□□□ 1.87
MBD1-216ENST00000587605 TRAPPC8Q9Y2L5 1435 aa26.69■■□□□ 1.86
MBD1-216ENST00000587605 DEPDC5O75140 1603 aa26.68■■□□□ 1.86
MBD1-216ENST00000587605 TRPM2O94759 1503 aa26.68■■□□□ 1.86
MBD1-216ENST00000587605 ZFYVE16Q7Z3T8 1539 aa26.68■■□□□ 1.86
MBD1-216ENST00000587605 NBPF1Q3BBV0 1214 aa26.68■■□□□ 1.86
MBD1-216ENST00000587605 CNGB1Q14028 1251 aaPredicted RBP26.67■■□□□ 1.86
MBD1-216ENST00000587605 TESK2Q96S53 571 aa26.67■■□□□ 1.86
MBD1-216ENST00000587605 SPAG9O60271 1321 aaKnown RBP26.65■■□□□ 1.86
MBD1-216ENST00000587605 TMF1P82094 1093 aa26.65■■□□□ 1.86
MBD1-216ENST00000587605 CEP152O94986 1710 aa26.64■■□□□ 1.86
MBD1-216ENST00000587605 PER1O15534 1290 aaPredicted RBP26.64■■□□□ 1.86
MBD1-216ENST00000587605 MADDQ8WXG6 1647 aa26.63■■□□□ 1.85
MBD1-216ENST00000587605 SPHKAPQ2M3C7 1700 aa26.63■■□□□ 1.85
MBD1-216ENST00000587605 TET3O43151 1660 aa26.63■■□□□ 1.85
MBD1-216ENST00000587605 PTPRTO14522 1441 aa26.62■■□□□ 1.85
MBD1-216ENST00000587605 PDE3BQ13370 1112 aa26.62■■□□□ 1.85
MBD1-216ENST00000587605 B4GALNT3Q6L9W6 998 aa26.62■■□□□ 1.85
MBD1-216ENST00000587605 NEURL4Q96JN8 1562 aa26.62■■□□□ 1.85
MBD1-216ENST00000587605 DISP3Q9P2K9 1392 aa26.61■■□□□ 1.85
MBD1-216ENST00000587605 IQGAP1P46940 1657 aa26.6■■□□□ 1.85
MBD1-216ENST00000587605 ABCA9Q8IUA7 1624 aa26.6■■□□□ 1.85
MBD1-216ENST00000587605 INO80Q9ULG1 1556 aaPredicted RBP26.59■■□□□ 1.85
MBD1-216ENST00000587605 WDR7Q9Y4E6 1490 aa26.59■■□□□ 1.85
MBD1-216ENST00000587605 SCAPERQ9BY12 1400 aa26.58■■□□□ 1.85
MBD1-216ENST00000587605 VWDEQ8N2E2 1590 aa26.57■■□□□ 1.84
MBD1-216ENST00000587605 ATP7AQ04656 1500 aa26.56■■□□□ 1.84
MBD1-216ENST00000587605 KANK1Q14678 1352 aa26.56■■□□□ 1.84
MBD1-216ENST00000587605 KIAA1210Q9ULL0 1709 aa26.54■■□□□ 1.84
MBD1-216ENST00000587605 CLTCL1P53675 1640 aa26.52■■□□□ 1.84
MBD1-216ENST00000587605 CDCA8Q53HL2 280 aa26.52■■□□□ 1.84
MBD1-216ENST00000587605 BLMP54132 1417 aaPredicted RBP26.52■■□□□ 1.84
MBD1-216ENST00000587605 FANCAO15360 1455 aa26.51■■□□□ 1.83
MBD1-216ENST00000587605 SCAF11Q99590 1463 aaKnown RBP26.51■■□□□ 1.83
MBD1-216ENST00000587605 PANK3Q9H999 370 aa26.51■■□□□ 1.83
MBD1-216ENST00000587605 CCDC136Q96JN2 1154 aa26.49■■□□□ 1.83
MBD1-216ENST00000587605 SYNMO15061 1565 aa26.49■■□□□ 1.83
MBD1-216ENST00000587605 AFAP1Q8N556 730 aa26.47■■□□□ 1.83
MBD1-216ENST00000587605 EIF3AQ14152 1382 aaKnown RBP26.46■■□□□ 1.83
MBD1-216ENST00000587605 SLC24A1O60721 1099 aa26.45■■□□□ 1.82
MBD1-216ENST00000587605 RRP1P56182 461 aaKnown RBP26.45■■□□□ 1.82
MBD1-216ENST00000587605 MSH5O43196 834 aa26.43■■□□□ 1.82
MBD1-216ENST00000587605 ADGRL1O94910 1474 aa26.43■■□□□ 1.82
MBD1-216ENST00000587605 RCAN3Q9UKA8 241 aa26.43■■□□□ 1.82
MBD1-216ENST00000587605 CC2D1BQ5T0F9 858 aaKnown RBP26.42■■□□□ 1.82
MBD1-216ENST00000587605 MYOM2P54296 1465 aa26.42■■□□□ 1.82
MBD1-216ENST00000587605 MROH1Q8NDA8 1641 aa26.39■■□□□ 1.82
MBD1-216ENST00000587605 NPC1L1Q9UHC9 1359 aa26.39■■□□□ 1.82
MBD1-216ENST00000587605 KNSTRNQ9Y448 316 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms