RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SPDYE16A6NNV3 312 aaPredicted RBP11.49□□□□□ -0.57
VMP1-205ENST00000587470 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
VMP1-205ENST00000587470 PHF14O94880 888 aa11.48□□□□□ -0.57
VMP1-205ENST00000587470 PDIA6Q15084 440 aa11.48□□□□□ -0.57
VMP1-205ENST00000587470 THSD4Q6ZMP0 1018 aa11.48□□□□□ -0.57
VMP1-205ENST00000587470 FBXW7Q969H0 707 aa11.46□□□□□ -0.57
VMP1-205ENST00000587470 STAC3Q96MF2 364 aa11.46□□□□□ -0.57
VMP1-205ENST00000587470 PROX2Q3B8N5 592 aa11.45□□□□□ -0.58
VMP1-205ENST00000587470 TYW1BQ6NUM6 668 aa11.45□□□□□ -0.58
VMP1-205ENST00000587470 EPAS1Q99814 870 aa11.45□□□□□ -0.58
VMP1-205ENST00000587470 PTPN5P54829 565 aa11.43□□□□□ -0.58
VMP1-205ENST00000587470 MRPL50Q8N5N7 158 aaKnown RBP11.43□□□□□ -0.58
VMP1-205ENST00000587470 DDX12PQ92771 950 aa11.43□□□□□ -0.58
VMP1-205ENST00000587470 RABGEF1Q9UJ41 708 aa11.42□□□□□ -0.58
VMP1-205ENST00000587470 WNT2BQ93097 391 aa11.41□□□□□ -0.58
VMP1-205ENST00000587470 IFFO2Q5TF58 517 aa11.4□□□□□ -0.58
VMP1-205ENST00000587470 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
VMP1-205ENST00000587470 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
VMP1-205ENST00000587470 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
VMP1-205ENST00000587470 C6orf132Q5T0Z8 1188 aa11.38□□□□□ -0.59
VMP1-205ENST00000587470 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
VMP1-205ENST00000587470 NBR1Q14596 966 aa11.36□□□□□ -0.59
VMP1-205ENST00000587470 GRXCR2A6NFK2 248 aa11.34□□□□□ -0.59
VMP1-205ENST00000587470 ONECUT3O60422 494 aaPredicted RBP11.34□□□□□ -0.59
VMP1-205ENST00000587470 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
VMP1-205ENST00000587470 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
VMP1-205ENST00000587470 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
VMP1-205ENST00000587470 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
VMP1-205ENST00000587470 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
VMP1-205ENST00000587470 EN1Q05925 392 aaPredicted RBP11.32□□□□□ -0.6
VMP1-205ENST00000587470 LAPTM4BQ86VI4 370 aa11.32□□□□□ -0.6
VMP1-205ENST00000587470 MAP3K7O43318 606 aa11.31□□□□□ -0.6
VMP1-205ENST00000587470 TRIM6-TRIM34B2RNG4 842 aa11.3□□□□□ -0.6
VMP1-205ENST00000587470 BCAMP50895 628 aa11.29□□□□□ -0.6
VMP1-205ENST00000587470 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
VMP1-205ENST00000587470 ZFRQ96KR1 1074 aaKnown RBP11.29□□□□□ -0.6
VMP1-205ENST00000587470 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
VMP1-205ENST00000587470 A0A0G2JS52 829 aa11.27□□□□□ -0.61
VMP1-205ENST00000587470 OSBPP22059 807 aa11.27□□□□□ -0.61
VMP1-205ENST00000587470 ANKK1Q8NFD2 765 aa11.27□□□□□ -0.61
VMP1-205ENST00000587470 ITGBL1O95965 494 aaPredicted RBP11.26□□□□□ -0.61
VMP1-205ENST00000587470 SEPT9Q9UHD8 586 aaPredicted RBP11.26□□□□□ -0.61
VMP1-205ENST00000587470 TSKSQ9UJT2 592 aa11.26□□□□□ -0.61
VMP1-205ENST00000587470 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
VMP1-205ENST00000587470 KDM2AQ9Y2K7 1162 aa11.24□□□□□ -0.61
VMP1-205ENST00000587470 VSIG10Q8N0Z9 540 aa11.23□□□□□ -0.61
VMP1-205ENST00000587470 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
VMP1-205ENST00000587470 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
VMP1-205ENST00000587470 RGS20O76081 388 aa11.22□□□□□ -0.61
VMP1-205ENST00000587470 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
VMP1-205ENST00000587470 WBP1LQ9NX94 342 aa11.22□□□□□ -0.61
VMP1-205ENST00000587470 MLLT3P42568 568 aaPredicted RBP11.21□□□□□ -0.61
VMP1-205ENST00000587470 SEMA3EO15041 775 aa11.17□□□□□ -0.62
VMP1-205ENST00000587470 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
VMP1-205ENST00000587470 PACS2Q86VP3 889 aa11.17□□□□□ -0.62
VMP1-205ENST00000587470 PRSS12P56730 875 aa11.16□□□□□ -0.62
VMP1-205ENST00000587470 CDCA7LQ96GN5 454 aa11.16□□□□□ -0.62
VMP1-205ENST00000587470 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
VMP1-205ENST00000587470 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
VMP1-205ENST00000587470 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.13□□□□□ -0.63
VMP1-205ENST00000587470 TSR3Q9UJK0 312 aaKnown RBP11.13□□□□□ -0.63
VMP1-205ENST00000587470 SMAPO00193 183 aa11.12□□□□□ -0.63
VMP1-205ENST00000587470 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
VMP1-205ENST00000587470 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
VMP1-205ENST00000587470 LRCH3Q96II8 777 aa11.11□□□□□ -0.63
VMP1-205ENST00000587470 TESPA1A2RU30 521 aaPredicted RBP11.1□□□□□ -0.63
VMP1-205ENST00000587470 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
VMP1-205ENST00000587470 TTC13Q8NBP0 860 aa11.1□□□□□ -0.63
VMP1-205ENST00000587470 TATDN2Q93075 761 aa11.08□□□□□ -0.64
VMP1-205ENST00000587470 SAMD7Q7Z3H4 446 aa11.07□□□□□ -0.64
VMP1-205ENST00000587470 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
VMP1-205ENST00000587470 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
VMP1-205ENST00000587470 KCNC4Q03721 635 aa11.06□□□□□ -0.64
VMP1-205ENST00000587470 PTGDRQ13258 359 aa11.06□□□□□ -0.64
VMP1-205ENST00000587470 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
VMP1-205ENST00000587470 TJAP1Q5JTD0 557 aa11.04□□□□□ -0.64
VMP1-205ENST00000587470 PADI6Q6TGC4 694 aa11.04□□□□□ -0.64
VMP1-205ENST00000587470 NUDT18Q6ZVK8 323 aa11.03□□□□□ -0.64
VMP1-205ENST00000587470 IRX2Q9BZI1 471 aaPredicted RBP11.02□□□□□ -0.65
VMP1-205ENST00000587470 FCHSD2O94868 740 aa11□□□□□ -0.65
VMP1-205ENST00000587470 PPP4CP60510 307 aa11□□□□□ -0.65
VMP1-205ENST00000587470 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
VMP1-205ENST00000587470 HDGFP51858 240 aaKnown RBP10.98□□□□□ -0.65
VMP1-205ENST00000587470 APLP1P51693 650 aa10.96□□□□□ -0.65
VMP1-205ENST00000587470 EYA1Q99502 592 aa10.96□□□□□ -0.65
VMP1-205ENST00000587470 MTRQ99707 1265 aa10.95□□□□□ -0.66
VMP1-205ENST00000587470 HIC1Q14526 733 aa10.94□□□□□ -0.66
VMP1-205ENST00000587470 TULP1O00294 542 aaPredicted RBP10.92□□□□□ -0.66
VMP1-205ENST00000587470 SWT1Q5T5J6 900 aaKnown RBP10.92□□□□□ -0.66
VMP1-205ENST00000587470 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
VMP1-205ENST00000587470 ZNF516Q92618 1163 aa10.92□□□□□ -0.66
VMP1-205ENST00000587470 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
VMP1-205ENST00000587470 IL21Q9HBE4 155 aa10.91□□□□□ -0.66
VMP1-205ENST00000587470 LCE2BO14633 110 aa10.9□□□□□ -0.66
VMP1-205ENST00000587470 GNPATO15228 680 aa10.89□□□□□ -0.67
VMP1-205ENST00000587470 GPR37O15354 613 aa10.88□□□□□ -0.67
VMP1-205ENST00000587470 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
VMP1-205ENST00000587470 OATP04181 439 aa10.87□□□□□ -0.67
VMP1-205ENST00000587470 DNAJB2P25686 324 aa10.87□□□□□ -0.67
VMP1-205ENST00000587470 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms