RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 TCOF1Q13428 1488 aaKnown RBP24.09■■□□□ 1.45
PRKCSH-204ENST00000587290 MAST1Q9Y2H9 1570 aa24.08■■□□□ 1.45
PRKCSH-204ENST00000587290 A2ML1A8K2U0 1454 aa24.08■■□□□ 1.45
PRKCSH-204ENST00000587290 MAP3K1Q13233 1512 aa24.08■■□□□ 1.45
PRKCSH-204ENST00000587290 ZNF335Q9H4Z2 1342 aaPredicted RBP24.08■■□□□ 1.44
PRKCSH-204ENST00000587290 RSPH4AQ5TD94 716 aa24.07■■□□□ 1.44
PRKCSH-204ENST00000587290 PZPP20742 1482 aa24.07■■□□□ 1.44
PRKCSH-204ENST00000587290 MYOM3Q5VTT5 1437 aa24.06■■□□□ 1.44
PRKCSH-204ENST00000587290 POLR1AO95602 1720 aaPredicted RBP24.06■■□□□ 1.44
PRKCSH-204ENST00000587290 RNF17Q9BXT8 1623 aaKnown RBP24.06■■□□□ 1.44
PRKCSH-204ENST00000587290 TNRQ92752 1358 aa24.05■■□□□ 1.44
PRKCSH-204ENST00000587290 TSPY4P0CV99 314 aa24.05■■□□□ 1.44
PRKCSH-204ENST00000587290 TSPY10P0CW01 314 aa24.05■■□□□ 1.44
PRKCSH-204ENST00000587290 WASHC2CQ9Y4E1 1318 aa24.05■■□□□ 1.44
PRKCSH-204ENST00000587290 FAM135AQ9P2D6 1515 aa24.04■■□□□ 1.44
PRKCSH-204ENST00000587290 CEP152O94986 1710 aa24.02■■□□□ 1.44
PRKCSH-204ENST00000587290 NEURL4Q96JN8 1562 aa24.01■■□□□ 1.43
PRKCSH-204ENST00000587290 PKD2Q13563 968 aa24.01■■□□□ 1.43
PRKCSH-204ENST00000587290 CFAP65Q6ZU64 1925 aaKnown RBP24.01■■□□□ 1.43
PRKCSH-204ENST00000587290 MROH1Q8NDA8 1641 aa24.01■■□□□ 1.43
PRKCSH-204ENST00000587290 ABCC3O15438 1527 aa24■■□□□ 1.43
PRKCSH-204ENST00000587290 CROCC2H7BZ55 1655 aa24■■□□□ 1.43
PRKCSH-204ENST00000587290 MIA2Q96PC5 1412 aa24■■□□□ 1.43
PRKCSH-204ENST00000587290 EIF2AK4Q9P2K8 1649 aaKnown RBP23.99■■□□□ 1.43
PRKCSH-204ENST00000587290 IQSEC2Q5JU85 1478 aa23.98■■□□□ 1.43
PRKCSH-204ENST00000587290 ZC3H13Q5T200 1668 aaKnown RBP23.98■■□□□ 1.43
PRKCSH-204ENST00000587290 PTPN23Q9H3S7 1636 aa23.97■■□□□ 1.43
PRKCSH-204ENST00000587290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.94■■□□□ 1.42
PRKCSH-204ENST00000587290 UGGT1Q9NYU2 1555 aa23.92■■□□□ 1.42
PRKCSH-204ENST00000587290 DUOX2Q9NRD8 1548 aa23.92■■□□□ 1.42
PRKCSH-204ENST00000587290 NLRP1Q9C000 1473 aa23.91■■□□□ 1.42
PRKCSH-204ENST00000587290 ABCC5O15440 1437 aa23.91■■□□□ 1.42
PRKCSH-204ENST00000587290 SPATA31D1Q6ZQQ2 1576 aa23.91■■□□□ 1.42
PRKCSH-204ENST00000587290 ERVK-7P63135 1459 aa23.89■■□□□ 1.42
PRKCSH-204ENST00000587290 KIF15Q9NS87 1388 aa23.89■■□□□ 1.41
PRKCSH-204ENST00000587290 SHANK2Q9UPX8 1470 aa23.87■■□□□ 1.41
PRKCSH-204ENST00000587290 UBAP1LF5GYI3 381 aa23.87■■□□□ 1.41
PRKCSH-204ENST00000587290 APLP2Q06481 763 aa23.87■■□□□ 1.41
PRKCSH-204ENST00000587290 DISP3Q9P2K9 1392 aa23.87■■□□□ 1.41
PRKCSH-204ENST00000587290 DAPK1P53355 1430 aa23.86■■□□□ 1.41
PRKCSH-204ENST00000587290 FGD6Q6ZV73 1430 aa23.86■■□□□ 1.41
PRKCSH-204ENST00000587290 RRP7BPQ9NSQ0 103 aa23.86■■□□□ 1.41
PRKCSH-204ENST00000587290 PRDM15P57071 1507 aaPredicted RBP23.85■■□□□ 1.41
PRKCSH-204ENST00000587290 IQGAP1P46940 1657 aa23.84■■□□□ 1.41
PRKCSH-204ENST00000587290 VWDEQ8N2E2 1590 aa23.84■■□□□ 1.41
PRKCSH-204ENST00000587290 UBR1Q8IWV7 1749 aa23.84■■□□□ 1.41
PRKCSH-204ENST00000587290 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
PRKCSH-204ENST00000587290 THEMISQ8N1K5 641 aaPredicted RBP23.83■■□□□ 1.41
PRKCSH-204ENST00000587290 ANKLE2Q86XL3 938 aa23.82■■□□□ 1.4
PRKCSH-204ENST00000587290 NPHP4O75161 1426 aaPredicted RBP23.82■■□□□ 1.4
PRKCSH-204ENST00000587290 ERBINQ96RT1 1412 aa23.81■■□□□ 1.4
PRKCSH-204ENST00000587290 STRCP1A6NGW2 1772 aa23.8■■□□□ 1.4
PRKCSH-204ENST00000587290 CHIC2Q9UKJ5 165 aa23.8■■□□□ 1.4
PRKCSH-204ENST00000587290 ILDR2Q71H61 639 aa23.79■■□□□ 1.4
PRKCSH-204ENST00000587290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.79■■□□□ 1.46e-8■■□□□ 12.5
PRKCSH-204ENST00000587290 MED14O60244 1454 aa23.79■■□□□ 1.4
PRKCSH-204ENST00000587290 CPS1P31327 1500 aa23.79■■□□□ 1.4
PRKCSH-204ENST00000587290 PIK3C2BO00750 1634 aa23.74■■□□□ 1.39
PRKCSH-204ENST00000587290 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
PRKCSH-204ENST00000587290 PIP4K2BP78356 416 aa23.72■■□□□ 1.39
PRKCSH-204ENST00000587290 ARHGAP31Q2M1Z3 1444 aa23.72■■□□□ 1.39
PRKCSH-204ENST00000587290 ANKRD30AQ9BXX3 1397 aa23.7■■□□□ 1.38
PRKCSH-204ENST00000587290 ALKQ9UM73 1620 aa23.7■■□□□ 1.38
PRKCSH-204ENST00000587290 SCAF11Q99590 1463 aaKnown RBP23.68■■□□□ 1.38
PRKCSH-204ENST00000587290 FAM50AQ14320 339 aaKnown RBP23.68■■□□□ 1.38
PRKCSH-204ENST00000587290 SYNMO15061 1565 aa23.67■■□□□ 1.38
PRKCSH-204ENST00000587290 ARHGAP23Q9P227 1491 aa23.67■■□□□ 1.38
PRKCSH-204ENST00000587290 KANK1Q14678 1352 aa23.66■■□□□ 1.38
PRKCSH-204ENST00000587290 SLIT1O75093 1534 aa23.66■■□□□ 1.38
PRKCSH-204ENST00000587290 LTKP29376 864 aa23.66■■□□□ 1.38
PRKCSH-204ENST00000587290 LMTK2Q8IWU2 1503 aa23.65■■□□□ 1.38
PRKCSH-204ENST00000587290 ADGRL2O95490 1459 aa23.65■■□□□ 1.38
PRKCSH-204ENST00000587290 EFCAB6Q5THR3 1501 aa23.64■■□□□ 1.38
PRKCSH-204ENST00000587290 LRRC7Q96NW7 1537 aa23.64■■□□□ 1.38
PRKCSH-204ENST00000587290 HSPA1LP34931 641 aa23.64■■□□□ 1.37
PRKCSH-204ENST00000587290 TXNDC2Q86VQ3 553 aa23.62■■□□□ 1.37
PRKCSH-204ENST00000587290 XIRP1Q702N8 1843 aaKnown RBP23.61■■□□□ 1.37
PRKCSH-204ENST00000587290 TOM1O60784 492 aa23.61■■□□□ 1.37
PRKCSH-204ENST00000587290 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
PRKCSH-204ENST00000587290 MYO5BQ9ULV0 1848 aa23.59■■□□□ 1.37
PRKCSH-204ENST00000587290 KDM5AP29375 1690 aaKnown RBP23.57■■□□□ 1.36
PRKCSH-204ENST00000587290 TMEM2Q9UHN6 1383 aa23.57■■□□□ 1.36
PRKCSH-204ENST00000587290 IDI1Q13907 227 aa23.57■■□□□ 1.36
PRKCSH-204ENST00000587290 ANKRD50Q9ULJ7 1429 aa23.57■■□□□ 1.36
PRKCSH-204ENST00000587290 STAG3Q9UJ98 1225 aa23.56■■□□□ 1.36
PRKCSH-204ENST00000587290 NOS1P29475 1434 aa23.56■■□□□ 1.36
PRKCSH-204ENST00000587290 ADGRB3O60242 1522 aa23.55■■□□□ 1.36
PRKCSH-204ENST00000587290 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
PRKCSH-204ENST00000587290 EID1Q9Y6B2 187 aa23.53■■□□□ 1.36
PRKCSH-204ENST00000587290 TET3O43151 1660 aa23.53■■□□□ 1.36
PRKCSH-204ENST00000587290 GCC2Q8IWJ2 1684 aa23.52■■□□□ 1.36
PRKCSH-204ENST00000587290 SOCS7O14512 581 aa23.52■■□□□ 1.36
PRKCSH-204ENST00000587290 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
PRKCSH-204ENST00000587290 UNC13BO14795 1591 aa23.51■■□□□ 1.35
PRKCSH-204ENST00000587290 SLC26A8Q96RN1 970 aa23.47■■□□□ 1.35
PRKCSH-204ENST00000587290 E9PCH4 1651 aa23.47■■□□□ 1.35
PRKCSH-204ENST00000587290 RPRD2Q5VT52 1461 aaKnown RBP23.45■■□□□ 1.34
PRKCSH-204ENST00000587290 RBM33Q96EV2 1170 aaKnown RBP23.44■■□□□ 1.34
PRKCSH-204ENST00000587290 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
PRKCSH-204ENST00000587290 ITGAEP38570 1179 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms