RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 PTPRKQ15262 1439 aa9.9□□□□□ -0.82
NPC1-206ENST00000587223 MADDQ8WXG6 1647 aa9.9□□□□□ -0.82
NPC1-206ENST00000587223 PLXNC1O60486 1568 aa9.9□□□□□ -0.82
NPC1-206ENST00000587223 CEBPAP49715 358 aaPredicted RBP9.9□□□□□ -0.82
NPC1-206ENST00000587223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.9□□□□□ -0.82
NPC1-206ENST00000587223 DUOX2Q9NRD8 1548 aa9.9□□□□□ -0.82
NPC1-206ENST00000587223 CROCC2H7BZ55 1655 aa9.9□□□□□ -0.83
NPC1-206ENST00000587223 WASHC2CQ9Y4E1 1318 aa9.89□□□□□ -0.83
NPC1-206ENST00000587223 RIMS1Q86UR5 1692 aaKnown RBP9.88□□□□□ -0.83
NPC1-206ENST00000587223 ADGRL2O95490 1459 aa9.88□□□□□ -0.83
NPC1-206ENST00000587223 CNTLNQ9NXG0 1405 aa9.88□□□□□ -0.83
NPC1-206ENST00000587223 FER1L4A9Z1Z3 1794 aa9.88□□□□□ -0.83
NPC1-206ENST00000587223 ROCK1Q13464 1354 aa9.88□□□□□ -0.83
NPC1-206ENST00000587223 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
NPC1-206ENST00000587223 ERBINQ96RT1 1412 aa9.87□□□□□ -0.83
NPC1-206ENST00000587223 ANKRD50Q9ULJ7 1429 aa9.87□□□□□ -0.83
NPC1-206ENST00000587223 KANK1Q14678 1352 aa9.86□□□□□ -0.83
NPC1-206ENST00000587223 NPM3O75607 178 aaKnown RBP9.85□□□□□ -0.83
NPC1-206ENST00000587223 POTEDQ86YR6 584 aa9.85□□□□□ -0.83
NPC1-206ENST00000587223 EIF2AK4Q9P2K8 1649 aaKnown RBP9.84□□□□□ -0.83
NPC1-206ENST00000587223 CLTCQ00610 1675 aaKnown RBP9.83□□□□□ -0.84
NPC1-206ENST00000587223 SETD1BQ9UPS6 1966 aaKnown RBP9.83□□□□□ -0.84
NPC1-206ENST00000587223 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
NPC1-206ENST00000587223 RNF17Q9BXT8 1623 aaKnown RBP9.81□□□□□ -0.84
NPC1-206ENST00000587223 KDM5DQ9BY66 1539 aa9.81□□□□□ -0.84
NPC1-206ENST00000587223 C3P01024 1663 aa9.8□□□□□ -0.84
NPC1-206ENST00000587223 TRIM52Q96A61 297 aa9.8□□□□□ -0.84
NPC1-206ENST00000587223 FAM135AQ9P2D6 1515 aa9.8□□□□□ -0.84
NPC1-206ENST00000587223 NAIPQ13075 1403 aa9.8□□□□□ -0.84
NPC1-206ENST00000587223 MROH2AA6NES4 1674 aa9.8□□□□□ -0.84
NPC1-206ENST00000587223 NUP155O75694 1391 aa9.79□□□□□ -0.84
NPC1-206ENST00000587223 ABCC3O15438 1527 aa9.79□□□□□ -0.84
NPC1-206ENST00000587223 NPATQ14207 1427 aa9.79□□□□□ -0.84
NPC1-206ENST00000587223 MROH1Q8NDA8 1641 aa9.78□□□□□ -0.84
NPC1-206ENST00000587223 CFAP65Q6ZU64 1925 aaKnown RBP9.78□□□□□ -0.84
NPC1-206ENST00000587223 HFM1A2PYH4 1435 aa9.78□□□□□ -0.84
NPC1-206ENST00000587223 PRDM15P57071 1507 aaPredicted RBP9.77□□□□□ -0.84
NPC1-206ENST00000587223 UHRF1BP1Q6BDS2 1440 aa9.77□□□□□ -0.85
NPC1-206ENST00000587223 HSPA2P54652 639 aa9.77□□□□□ -0.85
NPC1-206ENST00000587223 DEPDC5O75140 1603 aa9.77□□□□□ -0.85
NPC1-206ENST00000587223 PZPP20742 1482 aa9.77□□□□□ -0.85
NPC1-206ENST00000587223 TNRQ92752 1358 aa9.76□□□□□ -0.85
NPC1-206ENST00000587223 CEP152O94986 1710 aa9.76□□□□□ -0.85
NPC1-206ENST00000587223 MSH5O43196 834 aa9.76□□□□□ -0.85
NPC1-206ENST00000587223 ZC3H13Q5T200 1668 aaKnown RBP9.76□□□□□ -0.85
NPC1-206ENST00000587223 ARHGAP31Q2M1Z3 1444 aa9.75□□□□□ -0.85
NPC1-206ENST00000587223 CNKSR2Q8WXI2 1034 aa9.75□□□□□ -0.85
NPC1-206ENST00000587223 SCAF1Q9H7N4 1312 aaKnown RBP9.75□□□□□ -0.85
NPC1-206ENST00000587223 ACIN1Q9UKV3 1341 aaKnown RBP9.75□□□□□ -0.85
NPC1-206ENST00000587223 SETD5Q9C0A6 1442 aa9.74□□□□□ -0.85
NPC1-206ENST00000587223 LMTK3Q96Q04 1460 aa9.74□□□□□ -0.85
NPC1-206ENST00000587223 LMTK2Q8IWU2 1503 aa9.74□□□□□ -0.85
NPC1-206ENST00000587223 UNC13BO14795 1591 aa9.74□□□□□ -0.85
NPC1-206ENST00000587223 VWDEQ8N2E2 1590 aa9.74□□□□□ -0.85
NPC1-206ENST00000587223 CAMSAP1Q5T5Y3 1602 aa9.74□□□□□ -0.85
NPC1-206ENST00000587223 GCC2Q8IWJ2 1684 aa9.74□□□□□ -0.85
NPC1-206ENST00000587223 PREX1Q8TCU6 1659 aa9.74□□□□□ -0.85
NPC1-206ENST00000587223 TRIM26Q12899 539 aaPredicted RBP9.73□□□□□ -0.85
NPC1-206ENST00000587223 THEMISQ8N1K5 641 aaPredicted RBP9.73□□□□□ -0.85
NPC1-206ENST00000587223 STAG3Q9UJ98 1225 aa9.73□□□□□ -0.85
NPC1-206ENST00000587223 ERVK-7P63135 1459 aa9.72□□□□□ -0.85
NPC1-206ENST00000587223 PKD2Q13563 968 aa9.72□□□□□ -0.85
NPC1-206ENST00000587223 SLC52A1Q9NWF4 448 aa9.72□□□□□ -0.85
NPC1-206ENST00000587223 HRCP23327 699 aa9.71□□□□□ -0.86
NPC1-206ENST00000587223 IDI1Q13907 227 aa9.71□□□□□ -0.86
NPC1-206ENST00000587223 MPHOSPH9Q99550 1183 aa9.71□□□□□ -0.86
NPC1-206ENST00000587223 RAB3GAP2Q9H2M9 1393 aa9.71□□□□□ -0.86
NPC1-206ENST00000587223 SPATA31D1Q6ZQQ2 1576 aa9.71□□□□□ -0.86
NPC1-206ENST00000587223 IQGAP3Q86VI3 1631 aa9.71□□□□□ -0.86
NPC1-206ENST00000587223 TET3O43151 1660 aa9.71□□□□□ -0.86
NPC1-206ENST00000587223 DMRT2Q9Y5R5 561 aa9.7□□□□□ -0.86
NPC1-206ENST00000587223 A2ML1A8K2U0 1454 aa9.7□□□□□ -0.86
NPC1-206ENST00000587223 RPRD2Q5VT52 1461 aaKnown RBP9.7□□□□□ -0.86
NPC1-206ENST00000587223 NLRP1Q9C000 1473 aa9.7□□□□□ -0.86
NPC1-206ENST00000587223 EFCAB6Q5THR3 1501 aa9.7□□□□□ -0.86
NPC1-206ENST00000587223 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
NPC1-206ENST00000587223 NOS1P29475 1434 aa9.69□□□□□ -0.86
NPC1-206ENST00000587223 MYO3AQ8NEV4 1616 aa9.68□□□□□ -0.86
NPC1-206ENST00000587223 CEP170BQ9Y4F5 1589 aaPredicted RBP9.68□□□□□ -0.86
NPC1-206ENST00000587223 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
NPC1-206ENST00000587223 ANKLE2Q86XL3 938 aa9.68□□□□□ -0.86
NPC1-206ENST00000587223 E9PCH4 1651 aa9.67□□□□□ -0.86
NPC1-206ENST00000587223 UGGT1Q9NYU2 1555 aa9.67□□□□□ -0.86
NPC1-206ENST00000587223 HDGFP51858 240 aaKnown RBP9.66□□□□□ -0.86
NPC1-206ENST00000587223 EID1Q9Y6B2 187 aa9.66□□□□□ -0.86
NPC1-206ENST00000587223 TXNDC2Q86VQ3 553 aa9.65□□□□□ -0.86
NPC1-206ENST00000587223 ZNF142P52746 1687 aaPredicted RBP9.64□□□□□ -0.87
NPC1-206ENST00000587223 SYNMO15061 1565 aa9.64□□□□□ -0.87
NPC1-206ENST00000587223 PLA2R1Q13018 1463 aa9.64□□□□□ -0.87
NPC1-206ENST00000587223 PTPRTO14522 1441 aa9.64□□□□□ -0.87
NPC1-206ENST00000587223 ZNF326Q5BKZ1 582 aaKnown RBP9.63□□□□□ -0.87
NPC1-206ENST00000587223 PIK3C2BO00750 1634 aa9.63□□□□□ -0.87
NPC1-206ENST00000587223 LTKP29376 864 aa9.62□□□□□ -0.87
NPC1-206ENST00000587223 BCANQ96GW7 911 aa9.62□□□□□ -0.87
NPC1-206ENST00000587223 STRCQ7RTU9 1775 aa9.62□□□□□ -0.87
NPC1-206ENST00000587223 UBR1Q8IWV7 1749 aa9.62□□□□□ -0.87
NPC1-206ENST00000587223 TMEM2Q9UHN6 1383 aa9.62□□□□□ -0.87
NPC1-206ENST00000587223 PPP1R15AO75807 674 aaPredicted RBP9.61□□□□□ -0.87
NPC1-206ENST00000587223 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPC1-206ENST00000587223 SPHKAPQ2M3C7 1700 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms