RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 DUOX2Q9NRD8 1548 aa31.19■■■□□ 2.58
VAT1-203ENST00000587062 CROCC2H7BZ55 1655 aa31.18■■■□□ 2.58
VAT1-203ENST00000587062 ANKRD30AQ9BXX3 1397 aa31.17■■■□□ 2.58
VAT1-203ENST00000587062 KDM5DQ9BY66 1539 aa31.16■■■□□ 2.58
VAT1-203ENST00000587062 RRP7BPQ9NSQ0 103 aa31.16■■■□□ 2.58
VAT1-203ENST00000587062 DMRT2Q9Y5R5 561 aa31.16■■■□□ 2.58
VAT1-203ENST00000587062 EIF2AK4Q9P2K8 1649 aaKnown RBP31.16■■■□□ 2.58
VAT1-203ENST00000587062 KIF15Q9NS87 1388 aa31.16■■■□□ 2.58
VAT1-203ENST00000587062 CHIC2Q9UKJ5 165 aa31.12■■■□□ 2.57
VAT1-203ENST00000587062 PTPRKQ15262 1439 aa31.1■■■□□ 2.57
VAT1-203ENST00000587062 ERBINQ96RT1 1412 aa31.09■■■□□ 2.57
VAT1-203ENST00000587062 RNF17Q9BXT8 1623 aaKnown RBP31.08■■■□□ 2.57
VAT1-203ENST00000587062 ZC3H13Q5T200 1668 aaKnown RBP31.03■■■□□ 2.56
VAT1-203ENST00000587062 PZPP20742 1482 aa31.03■■■□□ 2.56
VAT1-203ENST00000587062 PPARGC1BQ86YN6 1023 aaKnown RBP31.03■■■□□ 2.56
VAT1-203ENST00000587062 KANK1Q14678 1352 aa31.03■■■□□ 2.56
VAT1-203ENST00000587062 NCOA1Q15788 1441 aa31.02■■■□□ 2.56
VAT1-203ENST00000587062 TNRQ92752 1358 aa30.99■■■□□ 2.55
VAT1-203ENST00000587062 ADGRL2O95490 1459 aa30.98■■■□□ 2.55
VAT1-203ENST00000587062 FBXO31Q5XUX0 539 aaPredicted RBP30.98■■■□□ 2.55
VAT1-203ENST00000587062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.98■■■□□ 2.55
VAT1-203ENST00000587062 MYO3AQ8NEV4 1616 aa30.98■■■□□ 2.55
VAT1-203ENST00000587062 ABCC3O15438 1527 aa30.96■■■□□ 2.55
VAT1-203ENST00000587062 CEP170BQ9Y4F5 1589 aaPredicted RBP30.95■■■□□ 2.54
VAT1-203ENST00000587062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.94■■■□□ 2.546e-7■□□□□ 8.5
VAT1-203ENST00000587062 ZNF142P52746 1687 aaPredicted RBP30.93■■■□□ 2.54
VAT1-203ENST00000587062 CAMSAP1Q5T5Y3 1602 aa30.92■■■□□ 2.54
VAT1-203ENST00000587062 A2ML1A8K2U0 1454 aa30.92■■■□□ 2.54
VAT1-203ENST00000587062 STRCQ7RTU9 1775 aa30.92■■■□□ 2.54
VAT1-203ENST00000587062 PRDM15P57071 1507 aaPredicted RBP30.91■■■□□ 2.54
VAT1-203ENST00000587062 MROH1Q8NDA8 1641 aa30.91■■■□□ 2.54
VAT1-203ENST00000587062 PKD2Q13563 968 aa30.9■■■□□ 2.54
VAT1-203ENST00000587062 PTPRTO14522 1441 aa30.9■■■□□ 2.54
VAT1-203ENST00000587062 ANKRD50Q9ULJ7 1429 aa30.88■■■□□ 2.53
VAT1-203ENST00000587062 NLRP1Q9C000 1473 aa30.88■■■□□ 2.53
VAT1-203ENST00000587062 CEP152O94986 1710 aa30.87■■■□□ 2.53
VAT1-203ENST00000587062 ITGAEP38570 1179 aa30.87■■■□□ 2.53
VAT1-203ENST00000587062 THEMISQ8N1K5 641 aaPredicted RBP30.87■■■□□ 2.53
VAT1-203ENST00000587062 PLA2R1Q13018 1463 aa30.87■■■□□ 2.53
VAT1-203ENST00000587062 ROCK1Q13464 1354 aa30.86■■■□□ 2.53
VAT1-203ENST00000587062 DEPDC5O75140 1603 aa30.86■■■□□ 2.53
VAT1-203ENST00000587062 ARHGAP31Q2M1Z3 1444 aa30.84■■■□□ 2.53
VAT1-203ENST00000587062 NCKAP5LQ9HCH0 1330 aa30.81■■■□□ 2.52
VAT1-203ENST00000587062 SPATA31D1Q6ZQQ2 1576 aa30.81■■■□□ 2.52
VAT1-203ENST00000587062 ILDR1Q86SU0 546 aaPredicted RBP30.8■■■□□ 2.52
VAT1-203ENST00000587062 ERVK-7P63135 1459 aa30.8■■■□□ 2.52
VAT1-203ENST00000587062 UGGT1Q9NYU2 1555 aa30.78■■■□□ 2.52
VAT1-203ENST00000587062 FBXO41Q8TF61 875 aa30.77■■■□□ 2.52
VAT1-203ENST00000587062 CFAP65Q6ZU64 1925 aaKnown RBP30.77■■■□□ 2.52
VAT1-203ENST00000587062 ANKLE2Q86XL3 938 aa30.76■■■□□ 2.51
VAT1-203ENST00000587062 CERKQ8TCT0 537 aa30.76■■■□□ 2.51
VAT1-203ENST00000587062 LMTK2Q8IWU2 1503 aa30.76■■■□□ 2.51
VAT1-203ENST00000587062 RRBP1Q9P2E9 1410 aaKnown RBP30.75■■■□□ 2.51
VAT1-203ENST00000587062 VWDEQ8N2E2 1590 aa30.72■■■□□ 2.51
VAT1-203ENST00000587062 STAG3Q9UJ98 1225 aa30.7■■■□□ 2.51
VAT1-203ENST00000587062 EFCAB6Q5THR3 1501 aa30.64■■■□□ 2.5
VAT1-203ENST00000587062 POLR1AO95602 1720 aaPredicted RBP30.64■■■□□ 2.5
VAT1-203ENST00000587062 RPRD2Q5VT52 1461 aaKnown RBP30.63■■■□□ 2.49
VAT1-203ENST00000587062 SLC52A1Q9NWF4 448 aa30.62■■■□□ 2.49
VAT1-203ENST00000587062 UNC13BO14795 1591 aa30.62■■■□□ 2.49
VAT1-203ENST00000587062 TET3O43151 1660 aa30.59■■■□□ 2.49
VAT1-203ENST00000587062 NUP155O75694 1391 aa30.59■■■□□ 2.49
VAT1-203ENST00000587062 EID1Q9Y6B2 187 aa30.59■■■□□ 2.49
VAT1-203ENST00000587062 UBR1Q8IWV7 1749 aa30.56■■■□□ 2.48
VAT1-203ENST00000587062 IDI1Q13907 227 aa30.56■■■□□ 2.48
VAT1-203ENST00000587062 NOS1P29475 1434 aa30.56■■■□□ 2.48
VAT1-203ENST00000587062 GCC2Q8IWJ2 1684 aa30.55■■■□□ 2.48
VAT1-203ENST00000587062 NPHP4O75161 1426 aaPredicted RBP30.55■■■□□ 2.48
VAT1-203ENST00000587062 MED14O60244 1454 aa30.53■■■□□ 2.48
VAT1-203ENST00000587062 ZNF335Q9H4Z2 1342 aaPredicted RBP30.52■■■□□ 2.48
VAT1-203ENST00000587062 TXNDC2Q86VQ3 553 aa30.52■■■□□ 2.48
VAT1-203ENST00000587062 IQGAP3Q86VI3 1631 aa30.51■■■□□ 2.48
VAT1-203ENST00000587062 PIK3C2BO00750 1634 aa30.51■■■□□ 2.47
VAT1-203ENST00000587062 LTBP4Q8N2S1 1624 aa30.51■■■□□ 2.47
VAT1-203ENST00000587062 NEURL4Q96JN8 1562 aa30.5■■■□□ 2.47
VAT1-203ENST00000587062 KDM5AP29375 1690 aaKnown RBP30.5■■■□□ 2.47
VAT1-203ENST00000587062 IQSEC2Q5JU85 1478 aa30.49■■■□□ 2.47
VAT1-203ENST00000587062 HDGFP51858 240 aaKnown RBP30.48■■■□□ 2.47
VAT1-203ENST00000587062 SLIT1O75093 1534 aa30.47■■■□□ 2.47
VAT1-203ENST00000587062 SYNMO15061 1565 aa30.47■■■□□ 2.47
VAT1-203ENST00000587062 SCAF11Q99590 1463 aaKnown RBP30.47■■■□□ 2.47
VAT1-203ENST00000587062 TMEM2Q9UHN6 1383 aa30.46■■■□□ 2.47
VAT1-203ENST00000587062 NAIPQ13075 1403 aa30.45■■■□□ 2.46
VAT1-203ENST00000587062 IQGAP1P46940 1657 aa30.45■■■□□ 2.46
VAT1-203ENST00000587062 ARHGAP23Q9P227 1491 aa30.44■■■□□ 2.46
VAT1-203ENST00000587062 HFM1A2PYH4 1435 aa30.42■■■□□ 2.46
VAT1-203ENST00000587062 TRIM52Q96A61 297 aa30.41■■■□□ 2.46
VAT1-203ENST00000587062 E9PCH4 1651 aa30.41■■■□□ 2.46
VAT1-203ENST00000587062 LTKP29376 864 aa30.4■■■□□ 2.46
VAT1-203ENST00000587062 ADGRB3O60242 1522 aa30.4■■■□□ 2.46
VAT1-203ENST00000587062 CPS1P31327 1500 aa30.4■■■□□ 2.46
VAT1-203ENST00000587062 CHGAP10645 457 aaKnown RBP30.39■■■□□ 2.46
VAT1-203ENST00000587062 BCANQ96GW7 911 aa30.35■■■□□ 2.45
VAT1-203ENST00000587062 ACIN1Q9UKV3 1341 aaKnown RBP30.34■■■□□ 2.45
VAT1-203ENST00000587062 PPP1R15AO75807 674 aaPredicted RBP30.33■■■□□ 2.45
VAT1-203ENST00000587062 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.33■■■□□ 2.45
VAT1-203ENST00000587062 UBAP1LF5GYI3 381 aa30.29■■■□□ 2.44
VAT1-203ENST00000587062 SLC4A1APQ9BWU0 796 aaKnown RBP30.27■■■□□ 2.44
VAT1-203ENST00000587062 TMEM131LA2VDJ0 1609 aa30.26■■■□□ 2.44
VAT1-203ENST00000587062 RIMS2Q9UQ26 1411 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms