RNA–Protein interactions for RNA: ENST00000586569.2

TNFRSF11A-202, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 8,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-202ENST00000586569 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.48
TNFRSF11A-202ENST00000586569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF11A-202ENST00000586569 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
TNFRSF11A-202ENST00000586569 CLIP1P30622 1438 aa18.07■□□□□ 0.48
TNFRSF11A-202ENST00000586569 MLECQ14165 292 aa18.07■□□□□ 0.48
TNFRSF11A-202ENST00000586569 NAP1L1P55209 391 aaKnown RBP18.07■□□□□ 0.48
TNFRSF11A-202ENST00000586569 IPO9Q96P70 1041 aaKnown RBP18.07■□□□□ 0.48
TNFRSF11A-202ENST00000586569 GTF2E1P29083 439 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF11A-202ENST00000586569 TIMELESSQ9UNS1 1208 aa18.06■□□□□ 0.48
TNFRSF11A-202ENST00000586569 ODF2Q5BJF6 829 aa18.06■□□□□ 0.48
TNFRSF11A-202ENST00000586569 HDGFL2Q7Z4V5 671 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF11A-202ENST00000586569 BCL11BQ9C0K0 894 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF11A-202ENST00000586569 FAM13BQ9NYF5 915 aa18.06■□□□□ 0.48
TNFRSF11A-202ENST00000586569 DDX49Q9Y6V7 483 aaKnown RBP18.06■□□□□ 0.48
TNFRSF11A-202ENST00000586569 HDGFP51858 240 aaKnown RBP18.05■□□□□ 0.48
TNFRSF11A-202ENST00000586569 PLCD4Q9BRC7 762 aa18.05■□□□□ 0.48
TNFRSF11A-202ENST00000586569 CCDC191Q8NCU4 936 aa18.04■□□□□ 0.48
TNFRSF11A-202ENST00000586569 CTDP1Q9Y5B0 961 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF11A-202ENST00000586569 RILPL2Q969X0 211 aa18.04■□□□□ 0.48
TNFRSF11A-202ENST00000586569 CDR1P51861 262 aa18.04■□□□□ 0.48
TNFRSF11A-202ENST00000586569 CT47A1Q5JQC4 288 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF11A-202ENST00000586569 ANKRD20A12PQ8NF67 263 aa18.04■□□□□ 0.48
TNFRSF11A-202ENST00000586569 HDAC5Q9UQL6 1122 aa18.02■□□□□ 0.48
TNFRSF11A-202ENST00000586569 TRIM34Q9BYJ4 488 aa18.02■□□□□ 0.47
TNFRSF11A-202ENST00000586569 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.47
TNFRSF11A-202ENST00000586569 SYNE3Q6ZMZ3 975 aa18.01■□□□□ 0.47
TNFRSF11A-202ENST00000586569 FBXW7Q969H0 707 aa18■□□□□ 0.47
TNFRSF11A-202ENST00000586569 CCDC47Q96A33 483 aaKnown RBP18■□□□□ 0.47
TNFRSF11A-202ENST00000586569 H0YHG0 523 aa18■□□□□ 0.47
TNFRSF11A-202ENST00000586569 KANK1Q14678 1352 aa18■□□□□ 0.47
TNFRSF11A-202ENST00000586569 RDXP35241 583 aaKnown RBP17.99■□□□□ 0.47
TNFRSF11A-202ENST00000586569 ATP6V1DQ9Y5K8 247 aa17.99■□□□□ 0.47
TNFRSF11A-202ENST00000586569 ZFYVE27Q5T4F4 411 aa17.99■□□□□ 0.47
TNFRSF11A-202ENST00000586569 CLUAP1Q96AJ1 413 aa17.99■□□□□ 0.47
TNFRSF11A-202ENST00000586569 CHMP4AQ9BY43 222 aa17.99■□□□□ 0.47
TNFRSF11A-202ENST00000586569 TRIM29Q14134 588 aa17.99■□□□□ 0.47
TNFRSF11A-202ENST00000586569 SKIDA1Q1XH10 827 aa17.98■□□□□ 0.47
TNFRSF11A-202ENST00000586569 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
TNFRSF11A-202ENST00000586569 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
TNFRSF11A-202ENST00000586569 ACBD3Q9H3P7 528 aa17.96■□□□□ 0.47
TNFRSF11A-202ENST00000586569 CCDC43Q96MW1 224 aaKnown RBP17.96■□□□□ 0.47
TNFRSF11A-202ENST00000586569 HOOK1Q9UJC3 728 aaKnown RBP17.96■□□□□ 0.47
TNFRSF11A-202ENST00000586569 DCTN1Q14203 1278 aa17.96■□□□□ 0.47
TNFRSF11A-202ENST00000586569 HSP90B2PQ58FF3 399 aa17.95■□□□□ 0.46
TNFRSF11A-202ENST00000586569 AMOTL1Q8IY63 956 aa17.94■□□□□ 0.46
TNFRSF11A-202ENST00000586569 SKOR2Q2VWA4 1001 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF11A-202ENST00000586569 DHX16O60231 1041 aaKnown RBP17.94■□□□□ 0.46
TNFRSF11A-202ENST00000586569 NOL10Q9BSC4 688 aaKnown RBP17.93■□□□□ 0.46
TNFRSF11A-202ENST00000586569 ARGLU1Q9NWB6 273 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF11A-202ENST00000586569 MNS1Q8NEH6 495 aa17.93■□□□□ 0.46
TNFRSF11A-202ENST00000586569 CCDC180Q9P1Z9 1646 aa17.92■□□□□ 0.46
TNFRSF11A-202ENST00000586569 EPS15P42566 896 aa17.92■□□□□ 0.46
TNFRSF11A-202ENST00000586569 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
TNFRSF11A-202ENST00000586569 CHMP4CQ96CF2 233 aa17.92■□□□□ 0.46
TNFRSF11A-202ENST00000586569 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
TNFRSF11A-202ENST00000586569 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
TNFRSF11A-202ENST00000586569 CCDC146Q8IYE0 955 aa17.91■□□□□ 0.46
TNFRSF11A-202ENST00000586569 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
TNFRSF11A-202ENST00000586569 CPLX2Q6PUV4 134 aaKnown RBP17.9■□□□□ 0.46
TNFRSF11A-202ENST00000586569 CCDC173Q0VFZ6 552 aa17.9■□□□□ 0.46
TNFRSF11A-202ENST00000586569 GSE1Q14687 1217 aa17.9■□□□□ 0.46
TNFRSF11A-202ENST00000586569 CAGE1Q8TC20 777 aa17.9■□□□□ 0.46
TNFRSF11A-202ENST00000586569 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
TNFRSF11A-202ENST00000586569 SLC4A3P48751 1232 aa17.89■□□□□ 0.45
TNFRSF11A-202ENST00000586569 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF11A-202ENST00000586569 CWC15Q9P013 229 aaKnown RBP17.89■□□□□ 0.45
TNFRSF11A-202ENST00000586569 ANKRD45Q5TZF3 282 aa17.89■□□□□ 0.45
TNFRSF11A-202ENST00000586569 PAF1Q8N7H5 531 aa17.89■□□□□ 0.45
TNFRSF11A-202ENST00000586569 LTV1Q96GA3 475 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF11A-202ENST00000586569 TTLL5Q6EMB2 1281 aa17.88■□□□□ 0.45
TNFRSF11A-202ENST00000586569 R3HCC1Q9Y3T6 440 aaKnown RBP17.88■□□□□ 0.45
TNFRSF11A-202ENST00000586569 SASS6Q6UVJ0 657 aa17.88■□□□□ 0.45
TNFRSF11A-202ENST00000586569 FOSBP53539 338 aa17.87■□□□□ 0.45
TNFRSF11A-202ENST00000586569 CCER2I3L3R5 266 aa17.87■□□□□ 0.45
TNFRSF11A-202ENST00000586569 MSH5O43196 834 aa17.86■□□□□ 0.45
TNFRSF11A-202ENST00000586569 NEFHP12036 1026 aa17.86■□□□□ 0.45
TNFRSF11A-202ENST00000586569 CENPJQ9HC77 1338 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF11A-202ENST00000586569 CPLX1O14810 134 aa17.86■□□□□ 0.45
TNFRSF11A-202ENST00000586569 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF11A-202ENST00000586569 ZRSR2Q15696 482 aaKnown RBP17.85■□□□□ 0.45
TNFRSF11A-202ENST00000586569 DHX37Q8IY37 1157 aaKnown RBP17.85■□□□□ 0.45
TNFRSF11A-202ENST00000586569 DIAPH3Q9NSV4 1193 aa17.85■□□□□ 0.45
TNFRSF11A-202ENST00000586569 TSPYL1Q9H0U9 437 aa17.85■□□□□ 0.45
TNFRSF11A-202ENST00000586569 OFD1O75665 1012 aa17.85■□□□□ 0.45
TNFRSF11A-202ENST00000586569 MYO6Q9UM54 1294 aa17.85■□□□□ 0.45
TNFRSF11A-202ENST00000586569 ANO2Q9NQ90 1003 aa17.84■□□□□ 0.45
TNFRSF11A-202ENST00000586569 LRRFIP1Q32MZ4 808 aaKnown RBP17.84■□□□□ 0.45
TNFRSF11A-202ENST00000586569 PDILTQ8N807 584 aa17.84■□□□□ 0.45
TNFRSF11A-202ENST00000586569 NFXL1Q6ZNB6 911 aa17.84■□□□□ 0.45
TNFRSF11A-202ENST00000586569 ROCK2O75116 1388 aaKnown RBP17.84■□□□□ 0.45
TNFRSF11A-202ENST00000586569 AMPHP49418 695 aa17.83■□□□□ 0.44
TNFRSF11A-202ENST00000586569 VPS37DQ86XT2 251 aa17.82■□□□□ 0.44
TNFRSF11A-202ENST00000586569 HSPA5P11021 654 aaKnown RBP17.82■□□□□ 0.44
TNFRSF11A-202ENST00000586569 ANKRD62A6NC57 917 aa17.82■□□□□ 0.44
TNFRSF11A-202ENST00000586569 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
TNFRSF11A-202ENST00000586569 ERICH2A1L162 156 aa17.8■□□□□ 0.44
TNFRSF11A-202ENST00000586569 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
TNFRSF11A-202ENST00000586569 TRDNQ13061 729 aa17.8■□□□□ 0.44
TNFRSF11A-202ENST00000586569 LMOD3Q0VAK6 560 aa17.79■□□□□ 0.44
TNFRSF11A-202ENST00000586569 RALBP1Q15311 655 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms