RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KIF3BO15066 747 aa19.17■□□□□ 0.66
BRCA1-225ENST00000586385 CAMSAP2Q08AD1 1489 aa19.16■□□□□ 0.66
BRCA1-225ENST00000586385 CCDC141Q6ZP82 1450 aa19.16■□□□□ 0.66
BRCA1-225ENST00000586385 UBAP1LF5GYI3 381 aa19.16■□□□□ 0.66
BRCA1-225ENST00000586385 TNRQ92752 1358 aa19.16■□□□□ 0.66
BRCA1-225ENST00000586385 PZPP20742 1482 aa19.15■□□□□ 0.66
BRCA1-225ENST00000586385 NEURL4Q96JN8 1562 aa19.14■□□□□ 0.65
BRCA1-225ENST00000586385 KDM5DQ9BY66 1539 aa19.13■□□□□ 0.65
BRCA1-225ENST00000586385 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
BRCA1-225ENST00000586385 RSPH4AQ5TD94 716 aa19.09■□□□□ 0.65
BRCA1-225ENST00000586385 MIA2Q96PC5 1412 aa19.08■□□□□ 0.65
BRCA1-225ENST00000586385 WASHC2CQ9Y4E1 1318 aa19.08■□□□□ 0.65
BRCA1-225ENST00000586385 ARHGEF5Q12774 1597 aa19.08■□□□□ 0.65
BRCA1-225ENST00000586385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.07■□□□□ 0.64
BRCA1-225ENST00000586385 SHANK2Q9UPX8 1470 aa19.06■□□□□ 0.64
BRCA1-225ENST00000586385 VWDEQ8N2E2 1590 aa19.04■□□□□ 0.64
BRCA1-225ENST00000586385 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
BRCA1-225ENST00000586385 NLRP1Q9C000 1473 aa19.03■□□□□ 0.64
BRCA1-225ENST00000586385 CPS1P31327 1500 aa19.03■□□□□ 0.64
BRCA1-225ENST00000586385 POLR1AO95602 1720 aaPredicted RBP19.03■□□□□ 0.64
BRCA1-225ENST00000586385 ABCC3O15438 1527 aa19.02■□□□□ 0.64
BRCA1-225ENST00000586385 HSPA1LP34931 641 aa19.02■□□□□ 0.64
BRCA1-225ENST00000586385 ANKLE2Q86XL3 938 aa19.02■□□□□ 0.64
BRCA1-225ENST00000586385 MED14O60244 1454 aa19.02■□□□□ 0.63
BRCA1-225ENST00000586385 RNF17Q9BXT8 1623 aaKnown RBP19.01■□□□□ 0.63
BRCA1-225ENST00000586385 ALKQ9UM73 1620 aa19.01■□□□□ 0.63
BRCA1-225ENST00000586385 TSPY4P0CV99 314 aa19.01■□□□□ 0.63
BRCA1-225ENST00000586385 TSPY10P0CW01 314 aa19.01■□□□□ 0.63
BRCA1-225ENST00000586385 KANK4Q5T7N3 995 aaPredicted RBP19.01■□□□□ 0.63
BRCA1-225ENST00000586385 THEMISQ8N1K5 641 aaPredicted RBP19.01■□□□□ 0.63
BRCA1-225ENST00000586385 UGGT1Q9NYU2 1555 aa19.01■□□□□ 0.63
BRCA1-225ENST00000586385 NPHP4O75161 1426 aaPredicted RBP19■□□□□ 0.63
BRCA1-225ENST00000586385 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
BRCA1-225ENST00000586385 MAST1Q9Y2H9 1570 aa19■□□□□ 0.63
BRCA1-225ENST00000586385 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
BRCA1-225ENST00000586385 LOC105371045A0A1W2PR82 267 aa18.98■□□□□ 0.63
BRCA1-225ENST00000586385 PIP4K2BP78356 416 aa18.98■□□□□ 0.63
BRCA1-225ENST00000586385 DEPDC5O75140 1603 aa18.98■□□□□ 0.63
BRCA1-225ENST00000586385 ERVK-7P63135 1459 aa18.97■□□□□ 0.63
BRCA1-225ENST00000586385 TOM1O60784 492 aa18.95■□□□□ 0.62
BRCA1-225ENST00000586385 MYOM3Q5VTT5 1437 aa18.94■□□□□ 0.62
BRCA1-225ENST00000586385 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
BRCA1-225ENST00000586385 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
BRCA1-225ENST00000586385 MED1Q15648 1581 aaPredicted RBP18.93■□□□□ 0.62
BRCA1-225ENST00000586385 EIF2AK4Q9P2K8 1649 aaKnown RBP18.92■□□□□ 0.62
BRCA1-225ENST00000586385 IQGAP1P46940 1657 aa18.92■□□□□ 0.62
BRCA1-225ENST00000586385 ZC3H13Q5T200 1668 aaKnown RBP18.92■□□□□ 0.62
BRCA1-225ENST00000586385 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
BRCA1-225ENST00000586385 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
BRCA1-225ENST00000586385 DUOX2Q9NRD8 1548 aa18.88■□□□□ 0.61
BRCA1-225ENST00000586385 ABCC5O15440 1437 aa18.87■□□□□ 0.61
BRCA1-225ENST00000586385 LTKP29376 864 aa18.87■□□□□ 0.61
BRCA1-225ENST00000586385 ARHGAP23Q9P227 1491 aa18.87■□□□□ 0.61
BRCA1-225ENST00000586385 CEP152O94986 1710 aa18.86■□□□□ 0.61
BRCA1-225ENST00000586385 KIF15Q9NS87 1388 aa18.86■□□□□ 0.61
BRCA1-225ENST00000586385 UBR1Q8IWV7 1749 aa18.86■□□□□ 0.61
BRCA1-225ENST00000586385 SCAF11Q99590 1463 aaKnown RBP18.85■□□□□ 0.61
BRCA1-225ENST00000586385 ARHGAP31Q2M1Z3 1444 aa18.85■□□□□ 0.61
BRCA1-225ENST00000586385 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
BRCA1-225ENST00000586385 SLIT1O75093 1534 aa18.84■□□□□ 0.61
BRCA1-225ENST00000586385 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
BRCA1-225ENST00000586385 ERBINQ96RT1 1412 aa18.82■□□□□ 0.6
BRCA1-225ENST00000586385 SYNMO15061 1565 aa18.81■□□□□ 0.6
BRCA1-225ENST00000586385 TXNDC2Q86VQ3 553 aa18.8■□□□□ 0.6
BRCA1-225ENST00000586385 DAPK1P53355 1430 aa18.79■□□□□ 0.6
BRCA1-225ENST00000586385 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
BRCA1-225ENST00000586385 CROCC2H7BZ55 1655 aa18.78■□□□□ 0.6
BRCA1-225ENST00000586385 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
BRCA1-225ENST00000586385 PTPN23Q9H3S7 1636 aa18.78■□□□□ 0.6
BRCA1-225ENST00000586385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.77■□□□□ 0.61e-6■■■□□ 18.6
BRCA1-225ENST00000586385 TMEM2Q9UHN6 1383 aa18.77■□□□□ 0.6
BRCA1-225ENST00000586385 FGD6Q6ZV73 1430 aa18.75■□□□□ 0.59
BRCA1-225ENST00000586385 PIK3C2BO00750 1634 aa18.75■□□□□ 0.59
BRCA1-225ENST00000586385 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
BRCA1-225ENST00000586385 IDI1Q13907 227 aa18.74■□□□□ 0.59
BRCA1-225ENST00000586385 XIRP1Q702N8 1843 aaKnown RBP18.72■□□□□ 0.59
BRCA1-225ENST00000586385 CHIC2Q9UKJ5 165 aa18.72■□□□□ 0.59
BRCA1-225ENST00000586385 RGS17Q9UGC6 210 aaPredicted RBP18.71■□□□□ 0.59
BRCA1-225ENST00000586385 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
BRCA1-225ENST00000586385 NOS1P29475 1434 aa18.71■□□□□ 0.59
BRCA1-225ENST00000586385 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
BRCA1-225ENST00000586385 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
BRCA1-225ENST00000586385 TET3O43151 1660 aa18.69■□□□□ 0.58
BRCA1-225ENST00000586385 TMEM94Q12767 1356 aa18.68■□□□□ 0.58
BRCA1-225ENST00000586385 KANK1Q14678 1352 aa18.68■□□□□ 0.58
BRCA1-225ENST00000586385 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
BRCA1-225ENST00000586385 FAM135BQ49AJ0 1406 aa18.67■□□□□ 0.58
BRCA1-225ENST00000586385 KCNA6P17658 529 aa18.66■□□□□ 0.58
BRCA1-225ENST00000586385 SLC26A8Q96RN1 970 aa18.66■□□□□ 0.58
BRCA1-225ENST00000586385 KDM5AP29375 1690 aaKnown RBP18.66■□□□□ 0.58
BRCA1-225ENST00000586385 ADGRL2O95490 1459 aa18.65■□□□□ 0.58
BRCA1-225ENST00000586385 RBM33Q96EV2 1170 aaKnown RBP18.65■□□□□ 0.58
BRCA1-225ENST00000586385 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
BRCA1-225ENST00000586385 ADGRB3O60242 1522 aa18.64■□□□□ 0.57
BRCA1-225ENST00000586385 APLP2Q06481 763 aa18.63■□□□□ 0.57
BRCA1-225ENST00000586385 NWD1Q149M9 1564 aa18.6■□□□□ 0.57
BRCA1-225ENST00000586385 ZFYVE9O95405 1425 aa18.6■□□□□ 0.57
BRCA1-225ENST00000586385 PROSER2Q86WR7 435 aaPredicted RBP18.6■□□□□ 0.57
BRCA1-225ENST00000586385 SLC52A1Q9NWF4 448 aa18.59■□□□□ 0.57
BRCA1-225ENST00000586385 ANKRD50Q9ULJ7 1429 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms