RNA–Protein interactions for RNA: ENST00000586215.1

POLR2E-203, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-203ENST00000586215 CEP170BQ9Y4F5 1589 aaPredicted RBP22.94■■□□□ 1.26
POLR2E-203ENST00000586215 NCKAP5LQ9HCH0 1330 aa22.94■■□□□ 1.26
POLR2E-203ENST00000586215 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
POLR2E-203ENST00000586215 ZNF335Q9H4Z2 1342 aaPredicted RBP22.92■■□□□ 1.26
POLR2E-203ENST00000586215 SOCS7O14512 581 aa22.92■■□□□ 1.26
POLR2E-203ENST00000586215 ADGBQ8N7X0 1667 aa22.92■■□□□ 1.26
POLR2E-203ENST00000586215 PLA2R1Q13018 1463 aa22.92■■□□□ 1.26
POLR2E-203ENST00000586215 DHX29Q7Z478 1369 aaKnown RBP22.88■■□□□ 1.25
POLR2E-203ENST00000586215 FGD6Q6ZV73 1430 aa22.85■■□□□ 1.25
POLR2E-203ENST00000586215 GGT6Q6P531 493 aa22.85■■□□□ 1.25
POLR2E-203ENST00000586215 PPP6R1Q9UPN7 881 aa22.85■■□□□ 1.25
POLR2E-203ENST00000586215 DNMT1P26358 1616 aaKnown RBP22.84■■□□□ 1.25
POLR2E-203ENST00000586215 PTPN23Q9H3S7 1636 aa22.84■■□□□ 1.25
POLR2E-203ENST00000586215 MAST1Q9Y2H9 1570 aa22.83■■□□□ 1.25
POLR2E-203ENST00000586215 PKD2Q13563 968 aa22.81■■□□□ 1.24
POLR2E-203ENST00000586215 A2ML1A8K2U0 1454 aa22.8■■□□□ 1.24
POLR2E-203ENST00000586215 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
POLR2E-203ENST00000586215 POLR1AO95602 1720 aaPredicted RBP22.78■■□□□ 1.24
POLR2E-203ENST00000586215 UBAP1LF5GYI3 381 aa22.77■■□□□ 1.24
POLR2E-203ENST00000586215 KIF3BO15066 747 aa22.77■■□□□ 1.24
POLR2E-203ENST00000586215 ABCC5O15440 1437 aa22.76■■□□□ 1.23
POLR2E-203ENST00000586215 SHANK2Q9UPX8 1470 aa22.75■■□□□ 1.23
POLR2E-203ENST00000586215 DAPK1P53355 1430 aa22.74■■□□□ 1.23
POLR2E-203ENST00000586215 FBXO31Q5XUX0 539 aaPredicted RBP22.73■■□□□ 1.23
POLR2E-203ENST00000586215 PZPP20742 1482 aa22.72■■□□□ 1.23
POLR2E-203ENST00000586215 FAM50AQ14320 339 aaKnown RBP22.71■■□□□ 1.23
POLR2E-203ENST00000586215 KDM5DQ9BY66 1539 aa22.71■■□□□ 1.23
POLR2E-203ENST00000586215 CROCC2H7BZ55 1655 aa22.71■■□□□ 1.23
POLR2E-203ENST00000586215 DUOX2Q9NRD8 1548 aa22.69■■□□□ 1.22
POLR2E-203ENST00000586215 FAM135AQ9P2D6 1515 aa22.69■■□□□ 1.22
POLR2E-203ENST00000586215 TNRQ92752 1358 aa22.69■■□□□ 1.22
POLR2E-203ENST00000586215 ANKRD30AQ9BXX3 1397 aa22.67■■□□□ 1.22
POLR2E-203ENST00000586215 WASHC2CQ9Y4E1 1318 aa22.67■■□□□ 1.22
POLR2E-203ENST00000586215 ALKQ9UM73 1620 aa22.67■■□□□ 1.22
POLR2E-203ENST00000586215 VWDEQ8N2E2 1590 aa22.67■■□□□ 1.22
POLR2E-203ENST00000586215 KIF15Q9NS87 1388 aa22.66■■□□□ 1.22
POLR2E-203ENST00000586215 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
POLR2E-203ENST00000586215 EIF2AK4Q9P2K8 1649 aaKnown RBP22.66■■□□□ 1.22
POLR2E-203ENST00000586215 CPS1P31327 1500 aa22.65■■□□□ 1.22
POLR2E-203ENST00000586215 PPARGC1BQ86YN6 1023 aaKnown RBP22.64■■□□□ 1.21
POLR2E-203ENST00000586215 CHIC2Q9UKJ5 165 aa22.64■■□□□ 1.21
POLR2E-203ENST00000586215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.63■■□□□ 1.21
POLR2E-203ENST00000586215 RNF17Q9BXT8 1623 aaKnown RBP22.62■■□□□ 1.21
POLR2E-203ENST00000586215 ERBINQ96RT1 1412 aa22.62■■□□□ 1.21
POLR2E-203ENST00000586215 MED1Q15648 1581 aaPredicted RBP22.62■■□□□ 1.21
POLR2E-203ENST00000586215 HSPA1LP34931 641 aa22.61■■□□□ 1.21
POLR2E-203ENST00000586215 STRCP1A6NGW2 1772 aa22.61■■□□□ 1.21
POLR2E-203ENST00000586215 DEPDC5O75140 1603 aa22.6■■□□□ 1.21
POLR2E-203ENST00000586215 MED14O60244 1454 aa22.59■■□□□ 1.21
POLR2E-203ENST00000586215 ADGRL2O95490 1459 aa22.59■■□□□ 1.21
POLR2E-203ENST00000586215 NLRP1Q9C000 1473 aa22.59■■□□□ 1.21
POLR2E-203ENST00000586215 UGGT1Q9NYU2 1555 aa22.59■■□□□ 1.21
POLR2E-203ENST00000586215 MROH1Q8NDA8 1641 aa22.57■■□□□ 1.2
POLR2E-203ENST00000586215 PIP4K2BP78356 416 aa22.56■■□□□ 1.2
POLR2E-203ENST00000586215 ABCC3O15438 1527 aa22.56■■□□□ 1.2
POLR2E-203ENST00000586215 IQGAP1P46940 1657 aa22.55■■□□□ 1.2
POLR2E-203ENST00000586215 NPHP4O75161 1426 aaPredicted RBP22.55■■□□□ 1.2
POLR2E-203ENST00000586215 ZC3H13Q5T200 1668 aaKnown RBP22.55■■□□□ 1.2
POLR2E-203ENST00000586215 ANKLE2Q86XL3 938 aa22.53■■□□□ 1.2
POLR2E-203ENST00000586215 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
POLR2E-203ENST00000586215 KANK1Q14678 1352 aa22.51■■□□□ 1.19
POLR2E-203ENST00000586215 THEMISQ8N1K5 641 aaPredicted RBP22.51■■□□□ 1.19
POLR2E-203ENST00000586215 CEP152O94986 1710 aa22.51■■□□□ 1.19
POLR2E-203ENST00000586215 ERVK-7P63135 1459 aa22.5■■□□□ 1.19
POLR2E-203ENST00000586215 TOM1O60784 492 aa22.5■■□□□ 1.19
POLR2E-203ENST00000586215 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
POLR2E-203ENST00000586215 PRDM15P57071 1507 aaPredicted RBP22.49■■□□□ 1.19
POLR2E-203ENST00000586215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.49■■□□□ 1.19
POLR2E-203ENST00000586215 CFAP65Q6ZU64 1925 aaKnown RBP22.49■■□□□ 1.19
POLR2E-203ENST00000586215 LRRC7Q96NW7 1537 aa22.48■■□□□ 1.19
POLR2E-203ENST00000586215 UBR1Q8IWV7 1749 aa22.48■■□□□ 1.19
POLR2E-203ENST00000586215 ANKRD50Q9ULJ7 1429 aa22.48■■□□□ 1.19
POLR2E-203ENST00000586215 ITGAEP38570 1179 aa22.46■■□□□ 1.19
POLR2E-203ENST00000586215 RRBP1Q9P2E9 1410 aaKnown RBP22.46■■□□□ 1.19
POLR2E-203ENST00000586215 SYNMO15061 1565 aa22.45■■□□□ 1.18
POLR2E-203ENST00000586215 ARHGAP31Q2M1Z3 1444 aa22.43■■□□□ 1.18
POLR2E-203ENST00000586215 XIRP1Q702N8 1843 aaKnown RBP22.42■■□□□ 1.18
POLR2E-203ENST00000586215 LMTK2Q8IWU2 1503 aa22.4■■□□□ 1.18
POLR2E-203ENST00000586215 ARHGAP23Q9P227 1491 aa22.39■■□□□ 1.17
POLR2E-203ENST00000586215 SCAF11Q99590 1463 aaKnown RBP22.37■■□□□ 1.17
POLR2E-203ENST00000586215 SLIT1O75093 1534 aa22.36■■□□□ 1.17
POLR2E-203ENST00000586215 LTKP29376 864 aa22.35■■□□□ 1.17
POLR2E-203ENST00000586215 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
POLR2E-203ENST00000586215 PIK3C2BO00750 1634 aa22.31■■□□□ 1.16
POLR2E-203ENST00000586215 UNC13BO14795 1591 aa22.31■■□□□ 1.16
POLR2E-203ENST00000586215 EFCAB6Q5THR3 1501 aa22.3■■□□□ 1.16
POLR2E-203ENST00000586215 RPRD2Q5VT52 1461 aaKnown RBP22.28■■□□□ 1.16
POLR2E-203ENST00000586215 TET3O43151 1660 aa22.26■■□□□ 1.15
POLR2E-203ENST00000586215 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
POLR2E-203ENST00000586215 NUP155O75694 1391 aa22.25■■□□□ 1.15
POLR2E-203ENST00000586215 TXNDC2Q86VQ3 553 aa22.25■■□□□ 1.15
POLR2E-203ENST00000586215 RGS17Q9UGC6 210 aaPredicted RBP22.25■■□□□ 1.15
POLR2E-203ENST00000586215 NOS1P29475 1434 aa22.24■■□□□ 1.15
POLR2E-203ENST00000586215 SLC52A1Q9NWF4 448 aa22.24■■□□□ 1.15
POLR2E-203ENST00000586215 GCC2Q8IWJ2 1684 aa22.23■■□□□ 1.15
POLR2E-203ENST00000586215 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
POLR2E-203ENST00000586215 KDM5AP29375 1690 aaKnown RBP22.23■■□□□ 1.15
POLR2E-203ENST00000586215 NAIPQ13075 1403 aa22.23■■□□□ 1.15
POLR2E-203ENST00000586215 IDI1Q13907 227 aa22.22■■□□□ 1.15
POLR2E-203ENST00000586215 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms