RNA–Protein interactions for RNA: ENST00000586074.1

PCSK4-204, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-204ENST00000586074 A2ML1A8K2U0 1454 aa30.22■■■□□ 2.43
PCSK4-204ENST00000586074 LRRC9Q6ZRR7 1453 aa30.22■■■□□ 2.43
PCSK4-204ENST00000586074 PZPP20742 1482 aa30.19■■■□□ 2.42
PCSK4-204ENST00000586074 TSPY4P0CV99 314 aa30.17■■■□□ 2.42
PCSK4-204ENST00000586074 TSPY10P0CW01 314 aa30.17■■■□□ 2.42
PCSK4-204ENST00000586074 TNRQ92752 1358 aa30.15■■■□□ 2.42
PCSK4-204ENST00000586074 DNMT1P26358 1616 aaKnown RBP30.15■■■□□ 2.42
PCSK4-204ENST00000586074 MAP3K1Q13233 1512 aa30.15■■■□□ 2.42
PCSK4-204ENST00000586074 ZNF335Q9H4Z2 1342 aaPredicted RBP30.14■■■□□ 2.42
PCSK4-204ENST00000586074 WASHC2CQ9Y4E1 1318 aa30.13■■■□□ 2.41
PCSK4-204ENST00000586074 MAST1Q9Y2H9 1570 aa30.11■■■□□ 2.41
PCSK4-204ENST00000586074 LOC105371045A0A1W2PR82 267 aa30.08■■■□□ 2.41
PCSK4-204ENST00000586074 RNF17Q9BXT8 1623 aaKnown RBP30.07■■■□□ 2.4
PCSK4-204ENST00000586074 MIA2Q96PC5 1412 aa30.07■■■□□ 2.4
PCSK4-204ENST00000586074 FBXO31Q5XUX0 539 aaPredicted RBP30.07■■■□□ 2.4
PCSK4-204ENST00000586074 POLR1AO95602 1720 aaPredicted RBP30.07■■■□□ 2.4
PCSK4-204ENST00000586074 NLRP1Q9C000 1473 aa30.06■■■□□ 2.4
PCSK4-204ENST00000586074 MYOM3Q5VTT5 1437 aa30.05■■■□□ 2.4
PCSK4-204ENST00000586074 ZC3H13Q5T200 1668 aaKnown RBP30.04■■■□□ 2.4
PCSK4-204ENST00000586074 DISP3Q9P2K9 1392 aa30.04■■■□□ 2.4
PCSK4-204ENST00000586074 EIF2AK4Q9P2K8 1649 aaKnown RBP30.04■■■□□ 2.4
PCSK4-204ENST00000586074 NEURL4Q96JN8 1562 aa30.01■■■□□ 2.39
PCSK4-204ENST00000586074 ABCC3O15438 1527 aa30.01■■■□□ 2.39
PCSK4-204ENST00000586074 KANK4Q5T7N3 995 aaPredicted RBP30■■■□□ 2.39
PCSK4-204ENST00000586074 SPATA31D1Q6ZQQ2 1576 aa29.99■■■□□ 2.39
PCSK4-204ENST00000586074 UBAP1LF5GYI3 381 aa29.98■■■□□ 2.39
PCSK4-204ENST00000586074 UGGT1Q9NYU2 1555 aa29.98■■■□□ 2.39
PCSK4-204ENST00000586074 THEMISQ8N1K5 641 aaPredicted RBP29.96■■■□□ 2.39
PCSK4-204ENST00000586074 CPS1P31327 1500 aa29.95■■■□□ 2.38
PCSK4-204ENST00000586074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.94■■■□□ 2.38
PCSK4-204ENST00000586074 ANKLE2Q86XL3 938 aa29.94■■■□□ 2.38
PCSK4-204ENST00000586074 DUOX2Q9NRD8 1548 aa29.94■■■□□ 2.38
PCSK4-204ENST00000586074 MROH1Q8NDA8 1641 aa29.93■■■□□ 2.38
PCSK4-204ENST00000586074 DEPDC5O75140 1603 aa29.93■■■□□ 2.38
PCSK4-204ENST00000586074 SHANK2Q9UPX8 1470 aa29.91■■■□□ 2.38
PCSK4-204ENST00000586074 ERVK-7P63135 1459 aa29.9■■■□□ 2.38
PCSK4-204ENST00000586074 CROCC2H7BZ55 1655 aa29.88■■■□□ 2.37
PCSK4-204ENST00000586074 MED14O60244 1454 aa29.88■■■□□ 2.37
PCSK4-204ENST00000586074 APLP2Q06481 763 aa29.88■■■□□ 2.37
PCSK4-204ENST00000586074 NPHP4O75161 1426 aaPredicted RBP29.88■■■□□ 2.37
PCSK4-204ENST00000586074 CEP152O94986 1710 aa29.86■■■□□ 2.37
PCSK4-204ENST00000586074 KIF15Q9NS87 1388 aa29.86■■■□□ 2.37
PCSK4-204ENST00000586074 PTPN23Q9H3S7 1636 aa29.85■■■□□ 2.37
PCSK4-204ENST00000586074 ERBINQ96RT1 1412 aa29.85■■■□□ 2.37
PCSK4-204ENST00000586074 PRDM15P57071 1507 aaPredicted RBP29.85■■■□□ 2.37
PCSK4-204ENST00000586074 VWDEQ8N2E2 1590 aa29.84■■■□□ 2.37
PCSK4-204ENST00000586074 IQGAP1P46940 1657 aa29.82■■■□□ 2.36
PCSK4-204ENST00000586074 ABCC5O15440 1437 aa29.82■■■□□ 2.36
PCSK4-204ENST00000586074 ILDR2Q71H61 639 aa29.81■■■□□ 2.36
PCSK4-204ENST00000586074 DAPK1P53355 1430 aa29.79■■■□□ 2.36
PCSK4-204ENST00000586074 FGD6Q6ZV73 1430 aa29.78■■■□□ 2.36
PCSK4-204ENST00000586074 TOM1O60784 492 aa29.77■■■□□ 2.36
PCSK4-204ENST00000586074 ARHGAP31Q2M1Z3 1444 aa29.77■■■□□ 2.36
PCSK4-204ENST00000586074 UBR1Q8IWV7 1749 aa29.75■■■□□ 2.35
PCSK4-204ENST00000586074 SCAF1Q9H7N4 1312 aaKnown RBP29.74■■■□□ 2.35
PCSK4-204ENST00000586074 RRP7BPQ9NSQ0 103 aa29.74■■■□□ 2.35
PCSK4-204ENST00000586074 SOCS7O14512 581 aa29.72■■■□□ 2.35
PCSK4-204ENST00000586074 KANK1Q14678 1352 aa29.71■■■□□ 2.35
PCSK4-204ENST00000586074 SCAF11Q99590 1463 aaKnown RBP29.71■■■□□ 2.35
PCSK4-204ENST00000586074 SYNMO15061 1565 aa29.7■■■□□ 2.35
PCSK4-204ENST00000586074 PIP4K2BP78356 416 aa29.7■■■□□ 2.35
PCSK4-204ENST00000586074 ANKRD30AQ9BXX3 1397 aa29.69■■■□□ 2.34
PCSK4-204ENST00000586074 SLIT1O75093 1534 aa29.67■■■□□ 2.34
PCSK4-204ENST00000586074 CFAP65Q6ZU64 1925 aaKnown RBP29.67■■■□□ 2.34
PCSK4-204ENST00000586074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.66■■■□□ 2.34
PCSK4-204ENST00000586074 ARHGAP23Q9P227 1491 aa29.66■■■□□ 2.34
PCSK4-204ENST00000586074 HSPA1LP34931 641 aa29.64■■■□□ 2.34
PCSK4-204ENST00000586074 LMTK2Q8IWU2 1503 aa29.64■■■□□ 2.34
PCSK4-204ENST00000586074 LRRC7Q96NW7 1537 aa29.62■■■□□ 2.33
PCSK4-204ENST00000586074 STRCP1A6NGW2 1772 aa29.62■■■□□ 2.33
PCSK4-204ENST00000586074 PIK3C2BO00750 1634 aa29.6■■■□□ 2.33
PCSK4-204ENST00000586074 ALKQ9UM73 1620 aa29.6■■■□□ 2.33
PCSK4-204ENST00000586074 CHIC2Q9UKJ5 165 aa29.59■■■□□ 2.33
PCSK4-204ENST00000586074 EID1Q9Y6B2 187 aa29.59■■■□□ 2.33
PCSK4-204ENST00000586074 ADGRL2O95490 1459 aa29.58■■■□□ 2.33
PCSK4-204ENST00000586074 TXNDC2Q86VQ3 553 aa29.58■■■□□ 2.33
PCSK4-204ENST00000586074 KDM5AP29375 1690 aaKnown RBP29.57■■■□□ 2.32
PCSK4-204ENST00000586074 LTKP29376 864 aa29.56■■■□□ 2.32
PCSK4-204ENST00000586074 MED1Q15648 1581 aaPredicted RBP29.56■■■□□ 2.32
PCSK4-204ENST00000586074 EFCAB6Q5THR3 1501 aa29.55■■■□□ 2.32
PCSK4-204ENST00000586074 TMEM2Q9UHN6 1383 aa29.55■■■□□ 2.32
PCSK4-204ENST00000586074 STAG3Q9UJ98 1225 aa29.55■■■□□ 2.32
PCSK4-204ENST00000586074 NOS1P29475 1434 aa29.48■■■□□ 2.31
PCSK4-204ENST00000586074 FAM50AQ14320 339 aaKnown RBP29.48■■■□□ 2.31
PCSK4-204ENST00000586074 ADGRB3O60242 1522 aa29.47■■■□□ 2.31
PCSK4-204ENST00000586074 IDI1Q13907 227 aa29.46■■■□□ 2.31
PCSK4-204ENST00000586074 ANKRD50Q9ULJ7 1429 aa29.45■■■□□ 2.31
PCSK4-204ENST00000586074 RPRD2Q5VT52 1461 aaKnown RBP29.45■■■□□ 2.31
PCSK4-204ENST00000586074 SLC52A1Q9NWF4 448 aa29.4■■■□□ 2.3
PCSK4-204ENST00000586074 TET3O43151 1660 aa29.38■■■□□ 2.29
PCSK4-204ENST00000586074 XIRP1Q702N8 1843 aaKnown RBP29.38■■■□□ 2.29
PCSK4-204ENST00000586074 PHF23Q9BUL5 403 aaPredicted RBP29.35■■■□□ 2.29
PCSK4-204ENST00000586074 SENP3Q9H4L4 574 aaPredicted RBP29.34■■■□□ 2.29
PCSK4-204ENST00000586074 UNC13BO14795 1591 aa29.34■■■□□ 2.29
PCSK4-204ENST00000586074 KCNA6P17658 529 aa29.33■■■□□ 2.29
PCSK4-204ENST00000586074 GCC2Q8IWJ2 1684 aa29.32■■■□□ 2.28
PCSK4-204ENST00000586074 NKTRP30414 1462 aaKnown RBP29.32■■■□□ 2.28
PCSK4-204ENST00000586074 TMEM94Q12767 1356 aa29.32■■■□□ 2.28
PCSK4-204ENST00000586074 NWD1Q149M9 1564 aa29.31■■■□□ 2.28
PCSK4-204ENST00000586074 SLC26A8Q96RN1 970 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms