RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 RTEL1-TNFRSF6BF6WH68 1400 aa25.29■■□□□ 1.64
HMG20B-215ENST00000585741 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
HMG20B-215ENST00000585741 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
HMG20B-215ENST00000585741 ATP7AQ04656 1500 aa25.26■■□□□ 1.63
HMG20B-215ENST00000585741 PLXNC1O60486 1568 aa25.26■■□□□ 1.63
HMG20B-215ENST00000585741 INO80Q9ULG1 1556 aaPredicted RBP25.26■■□□□ 1.63
HMG20B-215ENST00000585741 ADGBQ8N7X0 1667 aa25.25■■□□□ 1.63
HMG20B-215ENST00000585741 MROH2AA6NES4 1674 aa25.24■■□□□ 1.63
HMG20B-215ENST00000585741 ADGRL2O95490 1459 aa25.24■■□□□ 1.63
HMG20B-215ENST00000585741 NCOA1Q15788 1441 aa25.24■■□□□ 1.63
HMG20B-215ENST00000585741 ZMYM3Q14202 1370 aa25.24■■□□□ 1.63
HMG20B-215ENST00000585741 NPATQ14207 1427 aa25.23■■□□□ 1.63
HMG20B-215ENST00000585741 KIF15Q9NS87 1388 aa25.22■■□□□ 1.63
HMG20B-215ENST00000585741 A2MP01023 1474 aa25.21■■□□□ 1.63
HMG20B-215ENST00000585741 HFM1A2PYH4 1435 aa25.2■■□□□ 1.63
HMG20B-215ENST00000585741 LTBP4Q8N2S1 1624 aa25.2■■□□□ 1.62
HMG20B-215ENST00000585741 SETD5Q9C0A6 1442 aa25.2■■□□□ 1.62
HMG20B-215ENST00000585741 NAIPQ13075 1403 aa25.15■■□□□ 1.62
HMG20B-215ENST00000585741 CLTCQ00610 1675 aaKnown RBP25.15■■□□□ 1.62
HMG20B-215ENST00000585741 CAMSAP1Q5T5Y3 1602 aa25.15■■□□□ 1.62
HMG20B-215ENST00000585741 DUOX2Q9NRD8 1548 aa25.13■■□□□ 1.61
HMG20B-215ENST00000585741 ANKRD50Q9ULJ7 1429 aa25.12■■□□□ 1.61
HMG20B-215ENST00000585741 GCC2Q8IWJ2 1684 aa25.1■■□□□ 1.61
HMG20B-215ENST00000585741 RAB3GAP2Q9H2M9 1393 aa25.1■■□□□ 1.61
HMG20B-215ENST00000585741 GGT6Q6P531 493 aa25.1■■□□□ 1.61
HMG20B-215ENST00000585741 ACIN1Q9UKV3 1341 aaKnown RBP25.1■■□□□ 1.61
HMG20B-215ENST00000585741 DHX29Q7Z478 1369 aaKnown RBP25.09■■□□□ 1.61
HMG20B-215ENST00000585741 MYO3AQ8NEV4 1616 aa25.08■■□□□ 1.61
HMG20B-215ENST00000585741 ZNF142P52746 1687 aaPredicted RBP25.08■■□□□ 1.61
HMG20B-215ENST00000585741 ERBINQ96RT1 1412 aa25.08■■□□□ 1.61
HMG20B-215ENST00000585741 NCKAP5LQ9HCH0 1330 aa25.08■■□□□ 1.6
HMG20B-215ENST00000585741 TRIM52Q96A61 297 aa25.07■■□□□ 1.6
HMG20B-215ENST00000585741 PPP6R1Q9UPN7 881 aa25.07■■□□□ 1.6
HMG20B-215ENST00000585741 IQSEC2Q5JU85 1478 aa25.06■■□□□ 1.6
HMG20B-215ENST00000585741 PLA2R1Q13018 1463 aa25.05■■□□□ 1.6
HMG20B-215ENST00000585741 HRCP23327 699 aa25.05■■□□□ 1.6
HMG20B-215ENST00000585741 CEP170BQ9Y4F5 1589 aaPredicted RBP25.05■■□□□ 1.6
HMG20B-215ENST00000585741 KIF3BO15066 747 aa25.04■■□□□ 1.6
HMG20B-215ENST00000585741 ZNF335Q9H4Z2 1342 aaPredicted RBP25■■□□□ 1.59
HMG20B-215ENST00000585741 PKD2Q13563 968 aa24.99■■□□□ 1.59
HMG20B-215ENST00000585741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.99■■□□□ 1.592e-11■■■■□ 20.6
HMG20B-215ENST00000585741 ILDR2Q71H61 639 aa24.97■■□□□ 1.59
HMG20B-215ENST00000585741 EIF2AK4Q9P2K8 1649 aaKnown RBP24.96■■□□□ 1.59
HMG20B-215ENST00000585741 A2ML1A8K2U0 1454 aa24.96■■□□□ 1.59
HMG20B-215ENST00000585741 KANK1Q14678 1352 aa24.95■■□□□ 1.59
HMG20B-215ENST00000585741 DISP3Q9P2K9 1392 aa24.94■■□□□ 1.58
HMG20B-215ENST00000585741 NUP155O75694 1391 aa24.93■■□□□ 1.58
HMG20B-215ENST00000585741 FBXO31Q5XUX0 539 aaPredicted RBP24.93■■□□□ 1.58
HMG20B-215ENST00000585741 PZPP20742 1482 aa24.9■■□□□ 1.58
HMG20B-215ENST00000585741 KDM5DQ9BY66 1539 aa24.9■■□□□ 1.58
HMG20B-215ENST00000585741 FAM135AQ9P2D6 1515 aa24.89■■□□□ 1.57
HMG20B-215ENST00000585741 SLC4A1APQ9BWU0 796 aaKnown RBP24.88■■□□□ 1.57
HMG20B-215ENST00000585741 TNRQ92752 1358 aa24.88■■□□□ 1.57
HMG20B-215ENST00000585741 NEURL4Q96JN8 1562 aa24.86■■□□□ 1.57
HMG20B-215ENST00000585741 UNC13BO14795 1591 aa24.85■■□□□ 1.57
HMG20B-215ENST00000585741 CCER1Q8TC90 406 aaPredicted RBP24.85■■□□□ 1.57
HMG20B-215ENST00000585741 SPATA31D1Q6ZQQ2 1576 aa24.84■■□□□ 1.57
HMG20B-215ENST00000585741 WASHC2CQ9Y4E1 1318 aa24.84■■□□□ 1.57
HMG20B-215ENST00000585741 MPHOSPH9Q99550 1183 aa24.83■■□□□ 1.57
HMG20B-215ENST00000585741 RNF17Q9BXT8 1623 aaKnown RBP24.83■■□□□ 1.56
HMG20B-215ENST00000585741 UBAP1LF5GYI3 381 aa24.81■■□□□ 1.56
HMG20B-215ENST00000585741 DEPDC5O75140 1603 aa24.81■■□□□ 1.56
HMG20B-215ENST00000585741 PRDM15P57071 1507 aaPredicted RBP24.8■■□□□ 1.56
HMG20B-215ENST00000585741 POLR1AO95602 1720 aaPredicted RBP24.78■■□□□ 1.56
HMG20B-215ENST00000585741 DHX57Q6P158 1386 aaKnown RBP24.78■■□□□ 1.56
HMG20B-215ENST00000585741 SOCS7O14512 581 aa24.77■■□□□ 1.56
HMG20B-215ENST00000585741 NLRP1Q9C000 1473 aa24.77■■□□□ 1.56
HMG20B-215ENST00000585741 IQGAP3Q86VI3 1631 aa24.76■■□□□ 1.55
HMG20B-215ENST00000585741 ABCC3O15438 1527 aa24.75■■□□□ 1.55
HMG20B-215ENST00000585741 MROH1Q8NDA8 1641 aa24.75■■□□□ 1.55
HMG20B-215ENST00000585741 VWDEQ8N2E2 1590 aa24.73■■□□□ 1.55
HMG20B-215ENST00000585741 MED14O60244 1454 aa24.73■■□□□ 1.55
HMG20B-215ENST00000585741 UGGT1Q9NYU2 1555 aa24.72■■□□□ 1.55
HMG20B-215ENST00000585741 ANKLE2Q86XL3 938 aa24.72■■□□□ 1.55
HMG20B-215ENST00000585741 THEMISQ8N1K5 641 aaPredicted RBP24.72■■□□□ 1.55
HMG20B-215ENST00000585741 CPS1P31327 1500 aa24.71■■□□□ 1.55
HMG20B-215ENST00000585741 ZC3H13Q5T200 1668 aaKnown RBP24.69■■□□□ 1.54
HMG20B-215ENST00000585741 LMTK2Q8IWU2 1503 aa24.68■■□□□ 1.54
HMG20B-215ENST00000585741 FOXD1Q16676 465 aa24.68■■□□□ 1.54
HMG20B-215ENST00000585741 NPHP4O75161 1426 aaPredicted RBP24.68■■□□□ 1.54
HMG20B-215ENST00000585741 CEP152O94986 1710 aa24.67■■□□□ 1.54
HMG20B-215ENST00000585741 TET3O43151 1660 aa24.67■■□□□ 1.54
HMG20B-215ENST00000585741 ERVK-7P63135 1459 aa24.66■■□□□ 1.54
HMG20B-215ENST00000585741 ALKQ9UM73 1620 aa24.65■■□□□ 1.54
HMG20B-215ENST00000585741 CLSPNQ9HAW4 1339 aa24.64■■□□□ 1.54
HMG20B-215ENST00000585741 EFCAB6Q5THR3 1501 aa24.62■■□□□ 1.53
HMG20B-215ENST00000585741 HSPA1LP34931 641 aa24.62■■□□□ 1.53
HMG20B-215ENST00000585741 IQGAP1P46940 1657 aa24.61■■□□□ 1.53
HMG20B-215ENST00000585741 TOM1O60784 492 aa24.6■■□□□ 1.53
HMG20B-215ENST00000585741 RPRD2Q5VT52 1461 aaKnown RBP24.59■■□□□ 1.53
HMG20B-215ENST00000585741 PIP4K2BP78356 416 aa24.59■■□□□ 1.53
HMG20B-215ENST00000585741 STRCP1A6NGW2 1772 aa24.59■■□□□ 1.53
HMG20B-215ENST00000585741 ARHGAP31Q2M1Z3 1444 aa24.59■■□□□ 1.53
HMG20B-215ENST00000585741 E9PCH4 1651 aa24.57■■□□□ 1.52
HMG20B-215ENST00000585741 UBR1Q8IWV7 1749 aa24.56■■□□□ 1.52
HMG20B-215ENST00000585741 NEUROD1Q13562 356 aa24.55■■□□□ 1.52
HMG20B-215ENST00000585741 LRRC7Q96NW7 1537 aa24.55■■□□□ 1.52
HMG20B-215ENST00000585741 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
HMG20B-215ENST00000585741 ARHGAP23Q9P227 1491 aa24.54■■□□□ 1.52
HMG20B-215ENST00000585741 SCAF1Q9H7N4 1312 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms