RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 ARHGEF40Q8TER5 1519 aa19.86■□□□□ 0.77
SPC24-202ENST00000585486 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
SPC24-202ENST00000585486 VWDEQ8N2E2 1590 aa19.85■□□□□ 0.77
SPC24-202ENST00000585486 SIGLEC1Q9BZZ2 1709 aa19.84■□□□□ 0.77
SPC24-202ENST00000585486 AGLP35573 1532 aa19.83■□□□□ 0.77
SPC24-202ENST00000585486 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.77
SPC24-202ENST00000585486 RNF17Q9BXT8 1623 aaKnown RBP19.83■□□□□ 0.76
SPC24-202ENST00000585486 NUP155O75694 1391 aa19.83■□□□□ 0.76
SPC24-202ENST00000585486 TRIM52Q96A61 297 aa19.82■□□□□ 0.76
SPC24-202ENST00000585486 KIF3BO15066 747 aa19.81■□□□□ 0.76
SPC24-202ENST00000585486 PRDM15P57071 1507 aaPredicted RBP19.81■□□□□ 0.76
SPC24-202ENST00000585486 CCER1Q8TC90 406 aaPredicted RBP19.8■□□□□ 0.76
SPC24-202ENST00000585486 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
SPC24-202ENST00000585486 FAM135AQ9P2D6 1515 aa19.79■□□□□ 0.76
SPC24-202ENST00000585486 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
SPC24-202ENST00000585486 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
SPC24-202ENST00000585486 LMTK2Q8IWU2 1503 aa19.75■□□□□ 0.75
SPC24-202ENST00000585486 ANKRD30BQ9BXX2 1392 aa19.73■□□□□ 0.75
SPC24-202ENST00000585486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.73■□□□□ 0.752e-6■■■□□ 16.9
SPC24-202ENST00000585486 PKD2Q13563 968 aa19.72■□□□□ 0.75
SPC24-202ENST00000585486 FOXD1Q16676 465 aa19.71■□□□□ 0.75
SPC24-202ENST00000585486 ABCC3O15438 1527 aa19.7■□□□□ 0.74
SPC24-202ENST00000585486 PLA2R1Q13018 1463 aa19.69■□□□□ 0.74
SPC24-202ENST00000585486 GGT6Q6P531 493 aa19.68■□□□□ 0.74
SPC24-202ENST00000585486 TET3O43151 1660 aa19.68■□□□□ 0.74
SPC24-202ENST00000585486 KANK1Q14678 1352 aa19.67■□□□□ 0.74
SPC24-202ENST00000585486 PPP6R1Q9UPN7 881 aa19.66■□□□□ 0.74
SPC24-202ENST00000585486 SIN3AQ96ST3 1273 aa19.65■□□□□ 0.74
SPC24-202ENST00000585486 EFCAB6Q5THR3 1501 aa19.65■□□□□ 0.74
SPC24-202ENST00000585486 E9PCH4 1651 aa19.65■□□□□ 0.74
SPC24-202ENST00000585486 PTPRTO14522 1441 aa19.64■□□□□ 0.73
SPC24-202ENST00000585486 CEP152O94986 1710 aa19.63■□□□□ 0.73
SPC24-202ENST00000585486 ARHGAP31Q2M1Z3 1444 aa19.62■□□□□ 0.73
SPC24-202ENST00000585486 ZC3H13Q5T200 1668 aaKnown RBP19.61■□□□□ 0.73
SPC24-202ENST00000585486 NPATQ14207 1427 aa19.6■□□□□ 0.73
SPC24-202ENST00000585486 WASHC2CQ9Y4E1 1318 aa19.6■□□□□ 0.73
SPC24-202ENST00000585486 RPRD2Q5VT52 1461 aaKnown RBP19.59■□□□□ 0.73
SPC24-202ENST00000585486 CAMSAP1Q5T5Y3 1602 aa19.58■□□□□ 0.73
SPC24-202ENST00000585486 ZEB1P37275 1124 aaPredicted RBP19.56■□□□□ 0.72
SPC24-202ENST00000585486 NOS1P29475 1434 aa19.55■□□□□ 0.72
SPC24-202ENST00000585486 MLECQ14165 292 aa19.55■□□□□ 0.72
SPC24-202ENST00000585486 TRPM2O94759 1503 aa19.54■□□□□ 0.72
SPC24-202ENST00000585486 ARID4BQ4LE39 1312 aaPredicted RBP19.53■□□□□ 0.72
SPC24-202ENST00000585486 CLTCQ00610 1675 aaKnown RBP19.52■□□□□ 0.72
SPC24-202ENST00000585486 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
SPC24-202ENST00000585486 TIMELESSQ9UNS1 1208 aa19.51■□□□□ 0.71
SPC24-202ENST00000585486 SPHKAPQ2M3C7 1700 aa19.51■□□□□ 0.71
SPC24-202ENST00000585486 ZMYM3Q14202 1370 aa19.49■□□□□ 0.71
SPC24-202ENST00000585486 CNTLNQ9NXG0 1405 aa19.49■□□□□ 0.71
SPC24-202ENST00000585486 SYNMO15061 1565 aa19.49■□□□□ 0.71
SPC24-202ENST00000585486 ADAMTSL3P82987 1691 aa19.48■□□□□ 0.71
SPC24-202ENST00000585486 CLTCL1P53675 1640 aa19.47■□□□□ 0.71
SPC24-202ENST00000585486 MROH2AA6NES4 1674 aa19.47■□□□□ 0.71
SPC24-202ENST00000585486 FBXO31Q5XUX0 539 aaPredicted RBP19.47■□□□□ 0.71
SPC24-202ENST00000585486 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
SPC24-202ENST00000585486 SPATA31E1Q6ZUB1 1445 aa19.47■□□□□ 0.71
SPC24-202ENST00000585486 ERVK-7P63135 1459 aa19.47■□□□□ 0.71
SPC24-202ENST00000585486 UGGT1Q9NYU2 1555 aa19.46■□□□□ 0.71
SPC24-202ENST00000585486 SPATA31D1Q6ZQQ2 1576 aa19.45■□□□□ 0.7
SPC24-202ENST00000585486 PIK3C2BO00750 1634 aa19.45■□□□□ 0.7
SPC24-202ENST00000585486 PREX1Q8TCU6 1659 aa19.45■□□□□ 0.7
SPC24-202ENST00000585486 L3MBTL2Q969R5 705 aa19.43■□□□□ 0.7
SPC24-202ENST00000585486 NEURL4Q96JN8 1562 aa19.43■□□□□ 0.7
SPC24-202ENST00000585486 PPP1R15AO75807 674 aaPredicted RBP19.42■□□□□ 0.7
SPC24-202ENST00000585486 MADDQ8WXG6 1647 aa19.41■□□□□ 0.7
SPC24-202ENST00000585486 FER1L4A9Z1Z3 1794 aa19.41■□□□□ 0.7
SPC24-202ENST00000585486 TONSLQ96HA7 1378 aa19.4■□□□□ 0.7
SPC24-202ENST00000585486 C3P01024 1663 aa19.38■□□□□ 0.69
SPC24-202ENST00000585486 IDI1Q13907 227 aa19.38■□□□□ 0.69
SPC24-202ENST00000585486 CFAP65Q6ZU64 1925 aaKnown RBP19.38■□□□□ 0.69
SPC24-202ENST00000585486 CEBPAP49715 358 aaPredicted RBP19.37■□□□□ 0.69
SPC24-202ENST00000585486 ESF1Q9H501 851 aaKnown RBP19.37■□□□□ 0.69
SPC24-202ENST00000585486 SLC52A1Q9NWF4 448 aa19.37■□□□□ 0.69
SPC24-202ENST00000585486 ADGRB3O60242 1522 aa19.36■□□□□ 0.69
SPC24-202ENST00000585486 RIMS1Q86UR5 1692 aaKnown RBP19.33■□□□□ 0.69
SPC24-202ENST00000585486 UHRF1BP1Q6BDS2 1440 aa19.33■□□□□ 0.68
SPC24-202ENST00000585486 TNRQ92752 1358 aa19.32■□□□□ 0.68
SPC24-202ENST00000585486 TMEM131LA2VDJ0 1609 aa19.32■□□□□ 0.68
SPC24-202ENST00000585486 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
SPC24-202ENST00000585486 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
SPC24-202ENST00000585486 KIF1BO60333 1816 aa19.29■□□□□ 0.68
SPC24-202ENST00000585486 PTPRMP28827 1452 aa19.28■□□□□ 0.68
SPC24-202ENST00000585486 KDM4FA0A1W2PPD8 638 aa19.27■□□□□ 0.68
SPC24-202ENST00000585486 DCAF11Q8TEB1 546 aa19.27■□□□□ 0.68
SPC24-202ENST00000585486 A2ML1A8K2U0 1454 aa19.27■□□□□ 0.67
SPC24-202ENST00000585486 IFT172Q9UG01 1749 aa19.26■□□□□ 0.67
SPC24-202ENST00000585486 NLRP1Q9C000 1473 aa19.26■□□□□ 0.67
SPC24-202ENST00000585486 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
SPC24-202ENST00000585486 NRXN1Q9ULB1 1477 aa19.25■□□□□ 0.67
SPC24-202ENST00000585486 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
SPC24-202ENST00000585486 NEXMIFQ5QGS0 1516 aa19.24■□□□□ 0.67
SPC24-202ENST00000585486 MYOM2P54296 1465 aa19.23■□□□□ 0.67
SPC24-202ENST00000585486 STAC3Q96MF2 364 aa19.23■□□□□ 0.67
SPC24-202ENST00000585486 KDM5AP29375 1690 aaKnown RBP19.23■□□□□ 0.67
SPC24-202ENST00000585486 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
SPC24-202ENST00000585486 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
SPC24-202ENST00000585486 ZFYVE9O95405 1425 aa19.21■□□□□ 0.67
SPC24-202ENST00000585486 PPLO60437 1756 aa19.21■□□□□ 0.67
SPC24-202ENST00000585486 UBR1Q8IWV7 1749 aa19.2■□□□□ 0.66
SPC24-202ENST00000585486 CHGAP10645 457 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms