RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 MYO5CQ9NQX4 1742 aa21.73■■□□□ 1.07
TVP23C-210ENST00000584811 PLCH2O75038 1416 aa21.72■■□□□ 1.07
TVP23C-210ENST00000584811 UHRF1BP1Q6BDS2 1440 aa21.72■■□□□ 1.07
TVP23C-210ENST00000584811 DHX29Q7Z478 1369 aaKnown RBP21.72■■□□□ 1.07
TVP23C-210ENST00000584811 EFCAB2Q5VUJ9 269 aa21.72■■□□□ 1.07
TVP23C-210ENST00000584811 CCDC144AA2RUR9 1427 aa21.71■■□□□ 1.07
TVP23C-210ENST00000584811 RALGAPBQ86X10 1494 aa21.71■■□□□ 1.07
TVP23C-210ENST00000584811 ROCK2O75116 1388 aaKnown RBP21.69■■□□□ 1.06
TVP23C-210ENST00000584811 NEFLP07196 543 aa21.68■■□□□ 1.06
TVP23C-210ENST00000584811 TSHZ2Q9NRE2 1034 aa21.65■■□□□ 1.06
TVP23C-210ENST00000584811 MAST1Q9Y2H9 1570 aa21.64■■□□□ 1.06
TVP23C-210ENST00000584811 POLR1AO95602 1720 aaPredicted RBP21.64■■□□□ 1.05
TVP23C-210ENST00000584811 UHRF1BP1LA0JNW5 1464 aa21.63■■□□□ 1.05
TVP23C-210ENST00000584811 SPAG9O60271 1321 aaKnown RBP21.62■■□□□ 1.05
TVP23C-210ENST00000584811 UNC13BO14795 1591 aa21.62■■□□□ 1.05
TVP23C-210ENST00000584811 A2MP01023 1474 aa21.62■■□□□ 1.05
TVP23C-210ENST00000584811 PRAG1Q86YV5 1406 aa21.61■■□□□ 1.05
TVP23C-210ENST00000584811 ABCC1P33527 1531 aa21.61■■□□□ 1.05
TVP23C-210ENST00000584811 MYT1LQ9UL68 1186 aa21.6■■□□□ 1.05
TVP23C-210ENST00000584811 PLXNC1O60486 1568 aa21.6■■□□□ 1.05
TVP23C-210ENST00000584811 DUOX2Q9NRD8 1548 aa21.59■■□□□ 1.05
TVP23C-210ENST00000584811 IQGAP3Q86VI3 1631 aa21.55■■□□□ 1.04
TVP23C-210ENST00000584811 ERBINQ96RT1 1412 aa21.55■■□□□ 1.04
TVP23C-210ENST00000584811 WDR7Q9Y4E6 1490 aa21.53■■□□□ 1.04
TVP23C-210ENST00000584811 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
TVP23C-210ENST00000584811 FANCAO15360 1455 aa21.51■■□□□ 1.03
TVP23C-210ENST00000584811 MAGI2Q86UL8 1455 aa21.51■■□□□ 1.03
TVP23C-210ENST00000584811 SCAPERQ9BY12 1400 aa21.51■■□□□ 1.03
TVP23C-210ENST00000584811 ARID4BQ4LE39 1312 aaPredicted RBP21.51■■□□□ 1.03
TVP23C-210ENST00000584811 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
TVP23C-210ENST00000584811 KIF3BO15066 747 aa21.5■■□□□ 1.03
TVP23C-210ENST00000584811 DISP3Q9P2K9 1392 aa21.5■■□□□ 1.03
TVP23C-210ENST00000584811 ZFYVE16Q7Z3T8 1539 aa21.49■■□□□ 1.03
TVP23C-210ENST00000584811 TESK2Q96S53 571 aa21.48■■□□□ 1.03
TVP23C-210ENST00000584811 TMC1Q8TDI8 760 aa21.48■■□□□ 1.03
TVP23C-210ENST00000584811 ASXL2Q76L83 1435 aa21.48■■□□□ 1.03
TVP23C-210ENST00000584811 PNISRQ8TF01 805 aaKnown RBP21.47■■□□□ 1.03
TVP23C-210ENST00000584811 ADGRL1O94910 1474 aa21.43■■□□□ 1.02
TVP23C-210ENST00000584811 E9PCH4 1651 aa21.43■■□□□ 1.02
TVP23C-210ENST00000584811 GPRASP1Q5JY77 1395 aa21.43■■□□□ 1.02
TVP23C-210ENST00000584811 CC2D1BQ5T0F9 858 aaKnown RBP21.43■■□□□ 1.02
TVP23C-210ENST00000584811 ATP10AO60312 1499 aa21.43■■□□□ 1.02
TVP23C-210ENST00000584811 SALL2Q9Y467 1007 aaPredicted RBP21.42■■□□□ 1.02
TVP23C-210ENST00000584811 PER1O15534 1290 aaPredicted RBP21.41■■□□□ 1.02
TVP23C-210ENST00000584811 RTEL1-TNFRSF6BF6WH68 1400 aa21.4■■□□□ 1.02
TVP23C-210ENST00000584811 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
TVP23C-210ENST00000584811 ATP7AQ04656 1500 aa21.4■■□□□ 1.02
TVP23C-210ENST00000584811 PANK3Q9H999 370 aa21.39■■□□□ 1.01
TVP23C-210ENST00000584811 ABCA9Q8IUA7 1624 aa21.38■■□□□ 1.01
TVP23C-210ENST00000584811 UGGT1Q9NYU2 1555 aa21.38■■□□□ 1.01
TVP23C-210ENST00000584811 MYBBP1AQ9BQG0 1328 aaKnown RBP21.37■■□□□ 1.01
TVP23C-210ENST00000584811 PRDM15P57071 1507 aaPredicted RBP21.37■■□□□ 1.01
TVP23C-210ENST00000584811 ARAP3Q8WWN8 1544 aa21.36■■□□□ 1.01
TVP23C-210ENST00000584811 COL17A1Q9UMD9 1497 aaPredicted RBP21.35■■□□□ 1.01
TVP23C-210ENST00000584811 CLTCL1P53675 1640 aa21.34■■□□□ 1.01
TVP23C-210ENST00000584811 B4GALNT3Q6L9W6 998 aa21.34■■□□□ 1.01
TVP23C-210ENST00000584811 INO80Q9ULG1 1556 aaPredicted RBP21.34■■□□□ 1.01
TVP23C-210ENST00000584811 NPM1P06748 294 aaKnown RBP eCLIP21.33■■□□□ 1.01
TVP23C-210ENST00000584811 RALBP1Q15311 655 aa21.33■■□□□ 1.01
TVP23C-210ENST00000584811 TMF1P82094 1093 aa21.32■■□□□ 1
TVP23C-210ENST00000584811 PTPRTO14522 1441 aa21.31■■□□□ 1
TVP23C-210ENST00000584811 TRPM2O94759 1503 aa21.31■■□□□ 1
TVP23C-210ENST00000584811 KTN1Q86UP2 1357 aaKnown RBP21.31■■□□□ 1
TVP23C-210ENST00000584811 KANK1Q14678 1352 aa21.3■■□□□ 1
TVP23C-210ENST00000584811 PARD3Q8TEW0 1356 aa21.3■■□□□ 1
TVP23C-210ENST00000584811 GGT6Q6P531 493 aa21.3■■□□□ 1
TVP23C-210ENST00000584811 CFAP70Q5T0N1 1121 aa21.29■■□□□ 1
TVP23C-210ENST00000584811 DEPDC5O75140 1603 aa21.29■■□□□ 1
TVP23C-210ENST00000584811 BRD4O60885 1362 aaPredicted RBP21.28■■□□□ 1
TVP23C-210ENST00000584811 ADGRF5Q8IZF2 1346 aa21.28■■□□□ 1
TVP23C-210ENST00000584811 NUDCQ9Y266 331 aa21.28■■□□□ 1
TVP23C-210ENST00000584811 MADDQ8WXG6 1647 aa21.28■■□□□ 1
TVP23C-210ENST00000584811 LRPPRCP42704 1394 aaKnown RBP21.28■■□□□ 1
TVP23C-210ENST00000584811 RBM19Q9Y4C8 960 aaKnown RBP21.28■■□□□ 1
TVP23C-210ENST00000584811 SPHKAPQ2M3C7 1700 aa21.28■■□□□ 1
TVP23C-210ENST00000584811 MROH1Q8NDA8 1641 aa21.28■■□□□ 1
TVP23C-210ENST00000584811 RAPGEF3O95398 923 aa21.27■■□□□ 1
TVP23C-210ENST00000584811 NLRP13Q86W25 1043 aa21.27■■□□□ 1
TVP23C-210ENST00000584811 EIF2AK4Q9P2K8 1649 aaKnown RBP21.27■■□□□ 1
TVP23C-210ENST00000584811 CHGAP10645 457 aaKnown RBP21.27■□□□□ 0.99
TVP23C-210ENST00000584811 SMG6Q86US8 1419 aaKnown RBP21.26■□□□□ 0.99
TVP23C-210ENST00000584811 CD109Q6YHK3 1445 aa21.26■□□□□ 0.99
TVP23C-210ENST00000584811 KIDINS220Q9ULH0 1771 aa21.25■□□□□ 0.99
TVP23C-210ENST00000584811 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
TVP23C-210ENST00000584811 PPP4R2Q9NY27 417 aa21.24■□□□□ 0.99
TVP23C-210ENST00000584811 TET3O43151 1660 aa21.24■□□□□ 0.99
TVP23C-210ENST00000584811 VWDEQ8N2E2 1590 aa21.24■□□□□ 0.99
TVP23C-210ENST00000584811 RNF17Q9BXT8 1623 aaKnown RBP21.24■□□□□ 0.99
TVP23C-210ENST00000584811 LAMC1P11047 1609 aa21.23■□□□□ 0.99
TVP23C-210ENST00000584811 CFAP65Q6ZU64 1925 aaKnown RBP21.22■□□□□ 0.99
TVP23C-210ENST00000584811 CEP152O94986 1710 aa21.21■□□□□ 0.99
TVP23C-210ENST00000584811 CDCA7LQ96GN5 454 aa21.2■□□□□ 0.98
TVP23C-210ENST00000584811 ZNF518AQ6AHZ1 1483 aa21.2■□□□□ 0.98
TVP23C-210ENST00000584811 NUTM2DQ5VT03 806 aaPredicted RBP21.2■□□□□ 0.98
TVP23C-210ENST00000584811 SCAF11Q99590 1463 aaKnown RBP21.18■□□□□ 0.98
TVP23C-210ENST00000584811 PPRC1Q5VV67 1664 aaKnown RBP21.17■□□□□ 0.98
TVP23C-210ENST00000584811 IQGAP1P46940 1657 aa21.16■□□□□ 0.98
TVP23C-210ENST00000584811 POGZQ7Z3K3 1410 aa21.16■□□□□ 0.98
TVP23C-210ENST00000584811 KNSTRNQ9Y448 316 aa21.15■□□□□ 0.98
TVP23C-210ENST00000584811 EFCAB6Q5THR3 1501 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms