RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 MROH2AA6NES4 1674 aa20.88■□□□□ 0.93
SREBF1-223ENST00000584760 UBAP1LF5GYI3 381 aa20.87■□□□□ 0.93
SREBF1-223ENST00000584760 RSPH4AQ5TD94 716 aa20.86■□□□□ 0.93
SREBF1-223ENST00000584760 CLTCQ00610 1675 aaKnown RBP20.83■□□□□ 0.93
SREBF1-223ENST00000584760 PKD2Q13563 968 aa20.83■□□□□ 0.93
SREBF1-223ENST00000584760 FGD6Q6ZV73 1430 aa20.83■□□□□ 0.93
SREBF1-223ENST00000584760 TCOF1Q13428 1488 aaKnown RBP20.82■□□□□ 0.92
SREBF1-223ENST00000584760 PTPRKQ15262 1439 aa20.81■□□□□ 0.92
SREBF1-223ENST00000584760 DNMT1P26358 1616 aaKnown RBP20.81■□□□□ 0.92
SREBF1-223ENST00000584760 DHX29Q7Z478 1369 aaKnown RBP20.81■□□□□ 0.92
SREBF1-223ENST00000584760 SHANK2Q9UPX8 1470 aa20.79■□□□□ 0.92
SREBF1-223ENST00000584760 PLA2R1Q13018 1463 aa20.77■□□□□ 0.92
SREBF1-223ENST00000584760 PPP6R1Q9UPN7 881 aa20.77■□□□□ 0.92
SREBF1-223ENST00000584760 EIF2AK4Q9P2K8 1649 aaKnown RBP20.77■□□□□ 0.92
SREBF1-223ENST00000584760 MYO3AQ8NEV4 1616 aa20.76■□□□□ 0.91
SREBF1-223ENST00000584760 RNF17Q9BXT8 1623 aaKnown RBP20.76■□□□□ 0.91
SREBF1-223ENST00000584760 TSPY4P0CV99 314 aa20.76■□□□□ 0.91
SREBF1-223ENST00000584760 TSPY10P0CW01 314 aa20.76■□□□□ 0.91
SREBF1-223ENST00000584760 CEP170BQ9Y4F5 1589 aaPredicted RBP20.76■□□□□ 0.91
SREBF1-223ENST00000584760 FAM135AQ9P2D6 1515 aa20.75■□□□□ 0.91
SREBF1-223ENST00000584760 ABCC5O15440 1437 aa20.75■□□□□ 0.91
SREBF1-223ENST00000584760 DAPK1P53355 1430 aa20.73■□□□□ 0.91
SREBF1-223ENST00000584760 ZNF142P52746 1687 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-223ENST00000584760 KDM5DQ9BY66 1539 aa20.72■□□□□ 0.91
SREBF1-223ENST00000584760 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
SREBF1-223ENST00000584760 DUOX2Q9NRD8 1548 aa20.71■□□□□ 0.91
SREBF1-223ENST00000584760 FBXO31Q5XUX0 539 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-223ENST00000584760 MROH1Q8NDA8 1641 aa20.7■□□□□ 0.9
SREBF1-223ENST00000584760 A2ML1A8K2U0 1454 aa20.69■□□□□ 0.9
SREBF1-223ENST00000584760 PIP4K2BP78356 416 aa20.69■□□□□ 0.9
SREBF1-223ENST00000584760 ZC3H13Q5T200 1668 aaKnown RBP20.69■□□□□ 0.9
SREBF1-223ENST00000584760 KIF3BO15066 747 aa20.68■□□□□ 0.9
SREBF1-223ENST00000584760 HSPA1LP34931 641 aa20.66■□□□□ 0.9
SREBF1-223ENST00000584760 KIF15Q9NS87 1388 aa20.65■□□□□ 0.9
SREBF1-223ENST00000584760 TNRQ92752 1358 aa20.64■□□□□ 0.89
SREBF1-223ENST00000584760 TOM1O60784 492 aa20.64■□□□□ 0.89
SREBF1-223ENST00000584760 DEPDC5O75140 1603 aa20.64■□□□□ 0.89
SREBF1-223ENST00000584760 ERBINQ96RT1 1412 aa20.63■□□□□ 0.89
SREBF1-223ENST00000584760 CEP152O94986 1710 aa20.63■□□□□ 0.89
SREBF1-223ENST00000584760 ABCC3O15438 1527 aa20.63■□□□□ 0.89
SREBF1-223ENST00000584760 PRDM15P57071 1507 aaPredicted RBP20.63■□□□□ 0.89
SREBF1-223ENST00000584760 ADGRL2O95490 1459 aa20.62■□□□□ 0.89
SREBF1-223ENST00000584760 WASHC2CQ9Y4E1 1318 aa20.62■□□□□ 0.89
SREBF1-223ENST00000584760 PZPP20742 1482 aa20.62■□□□□ 0.89
SREBF1-223ENST00000584760 ANKLE2Q86XL3 938 aa20.61■□□□□ 0.89
SREBF1-223ENST00000584760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.59■□□□□ 0.895e-15■■■■□ 23.7
SREBF1-223ENST00000584760 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
SREBF1-223ENST00000584760 THEMISQ8N1K5 641 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-223ENST00000584760 CPS1P31327 1500 aa20.58■□□□□ 0.88
SREBF1-223ENST00000584760 FAM50AQ14320 339 aaKnown RBP20.57■□□□□ 0.88
SREBF1-223ENST00000584760 NEURL4Q96JN8 1562 aa20.56■□□□□ 0.88
SREBF1-223ENST00000584760 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
SREBF1-223ENST00000584760 CHIC2Q9UKJ5 165 aa20.53■□□□□ 0.88
SREBF1-223ENST00000584760 POLR1AO95602 1720 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-223ENST00000584760 MED1Q15648 1581 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-223ENST00000584760 PPARGC1BQ86YN6 1023 aaKnown RBP20.52■□□□□ 0.88
SREBF1-223ENST00000584760 VWDEQ8N2E2 1590 aa20.51■□□□□ 0.87
SREBF1-223ENST00000584760 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-223ENST00000584760 NPHP4O75161 1426 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-223ENST00000584760 UGGT1Q9NYU2 1555 aa20.5■□□□□ 0.87
SREBF1-223ENST00000584760 NLRP1Q9C000 1473 aa20.5■□□□□ 0.87
SREBF1-223ENST00000584760 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-223ENST00000584760 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
SREBF1-223ENST00000584760 ERVK-7P63135 1459 aa20.48■□□□□ 0.87
SREBF1-223ENST00000584760 LMTK2Q8IWU2 1503 aa20.47■□□□□ 0.87
SREBF1-223ENST00000584760 RRBP1Q9P2E9 1410 aaKnown RBP20.46■□□□□ 0.87
SREBF1-223ENST00000584760 ANKRD50Q9ULJ7 1429 aa20.46■□□□□ 0.87
SREBF1-223ENST00000584760 MED14O60244 1454 aa20.46■□□□□ 0.87
SREBF1-223ENST00000584760 UNC13BO14795 1591 aa20.46■□□□□ 0.87
SREBF1-223ENST00000584760 ROCK1Q13464 1354 aa20.46■□□□□ 0.87
SREBF1-223ENST00000584760 ARHGAP31Q2M1Z3 1444 aa20.45■□□□□ 0.86
SREBF1-223ENST00000584760 EFCAB6Q5THR3 1501 aa20.43■□□□□ 0.86
SREBF1-223ENST00000584760 KANK1Q14678 1352 aa20.42■□□□□ 0.86
SREBF1-223ENST00000584760 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
SREBF1-223ENST00000584760 UBR1Q8IWV7 1749 aa20.39■□□□□ 0.86
SREBF1-223ENST00000584760 TET3O43151 1660 aa20.39■□□□□ 0.86
SREBF1-223ENST00000584760 LRRC7Q96NW7 1537 aa20.39■□□□□ 0.85
SREBF1-223ENST00000584760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.85
SREBF1-223ENST00000584760 IQGAP1P46940 1657 aa20.38■□□□□ 0.85
SREBF1-223ENST00000584760 GCC2Q8IWJ2 1684 aa20.38■□□□□ 0.85
SREBF1-223ENST00000584760 IQGAP3Q86VI3 1631 aa20.36■□□□□ 0.85
SREBF1-223ENST00000584760 SYNMO15061 1565 aa20.35■□□□□ 0.85
SREBF1-223ENST00000584760 STRCP1A6NGW2 1772 aa20.34■□□□□ 0.85
SREBF1-223ENST00000584760 ITGAEP38570 1179 aa20.34■□□□□ 0.85
SREBF1-223ENST00000584760 TXNDC2Q86VQ3 553 aa20.34■□□□□ 0.85
SREBF1-223ENST00000584760 KDM5AP29375 1690 aaKnown RBP20.34■□□□□ 0.85
SREBF1-223ENST00000584760 PIK3C2BO00750 1634 aa20.34■□□□□ 0.85
SREBF1-223ENST00000584760 LTKP29376 864 aa20.33■□□□□ 0.85
SREBF1-223ENST00000584760 RPRD2Q5VT52 1461 aaKnown RBP20.32■□□□□ 0.84
SREBF1-223ENST00000584760 E9PCH4 1651 aa20.32■□□□□ 0.84
SREBF1-223ENST00000584760 NOS1P29475 1434 aa20.31■□□□□ 0.84
SREBF1-223ENST00000584760 SCAF11Q99590 1463 aaKnown RBP20.3■□□□□ 0.84
SREBF1-223ENST00000584760 EID1Q9Y6B2 187 aa20.28■□□□□ 0.84
SREBF1-223ENST00000584760 SLIT1O75093 1534 aa20.27■□□□□ 0.83
SREBF1-223ENST00000584760 ARHGAP23Q9P227 1491 aa20.26■□□□□ 0.83
SREBF1-223ENST00000584760 RGS17Q9UGC6 210 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-223ENST00000584760 ADGRB3O60242 1522 aa20.25■□□□□ 0.83
SREBF1-223ENST00000584760 NAIPQ13075 1403 aa20.25■□□□□ 0.83
SREBF1-223ENST00000584760 STAG3Q9UJ98 1225 aa20.24■□□□□ 0.83
SREBF1-223ENST00000584760 MYO5BQ9ULV0 1848 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms