RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 TTLL12Q14166 644 aaPredicted RBP11.5□□□□□ -0.57
TTC39C-208ENST00000584095 FBXW7Q969H0 707 aa11.49□□□□□ -0.57
TTC39C-208ENST00000584095 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
TTC39C-208ENST00000584095 FOSBP53539 338 aa11.48□□□□□ -0.57
TTC39C-208ENST00000584095 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
TTC39C-208ENST00000584095 GIGYF2Q6Y7W6 1299 aaKnown RBP11.46□□□□□ -0.57
TTC39C-208ENST00000584095 REPIN1Q9BWE0 567 aaKnown RBP11.46□□□□□ -0.57
TTC39C-208ENST00000584095 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
TTC39C-208ENST00000584095 KHSRPQ92945 711 aaKnown RBP eCLIP11.45□□□□□ -0.58
TTC39C-208ENST00000584095 NUDT7P0C024 238 aa11.44□□□□□ -0.58
TTC39C-208ENST00000584095 MS4A1P11836 297 aa11.43□□□□□ -0.58
TTC39C-208ENST00000584095 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
TTC39C-208ENST00000584095 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
TTC39C-208ENST00000584095 ZNF454Q8N9F8 522 aa11.43□□□□□ -0.58
TTC39C-208ENST00000584095 PHOX2BQ99453 314 aa11.43□□□□□ -0.58
TTC39C-208ENST00000584095 C6orf132Q5T0Z8 1188 aa11.42□□□□□ -0.58
TTC39C-208ENST00000584095 ZDHHC16Q969W1 377 aa11.42□□□□□ -0.58
TTC39C-208ENST00000584095 TMUB1Q9BVT8 246 aa11.42□□□□□ -0.58
TTC39C-208ENST00000584095 GPR153Q6NV75 609 aa11.4□□□□□ -0.58
TTC39C-208ENST00000584095 PADI6Q6TGC4 694 aa11.4□□□□□ -0.58
TTC39C-208ENST00000584095 ADAM33Q9BZ11 813 aa11.4□□□□□ -0.58
TTC39C-208ENST00000584095 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
TTC39C-208ENST00000584095 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
TTC39C-208ENST00000584095 ZSWIM6Q9HCJ5 1215 aa11.39□□□□□ -0.59
TTC39C-208ENST00000584095 CLCN1P35523 988 aa11.38□□□□□ -0.59
TTC39C-208ENST00000584095 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
TTC39C-208ENST00000584095 METTL3Q86U44 580 aaKnown RBP11.37□□□□□ -0.59
TTC39C-208ENST00000584095 TTC13Q8NBP0 860 aa11.37□□□□□ -0.59
TTC39C-208ENST00000584095 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
TTC39C-208ENST00000584095 RIMBP2O15034 1052 aa11.36□□□□□ -0.59
TTC39C-208ENST00000584095 RBM27Q9P2N5 1060 aaKnown RBP11.36□□□□□ -0.59
TTC39C-208ENST00000584095 ADGRG1Q9Y653 693 aa11.36□□□□□ -0.59
TTC39C-208ENST00000584095 GOPCQ9HD26 462 aa11.35□□□□□ -0.59
TTC39C-208ENST00000584095 SCUBE2Q9NQ36 999 aa11.35□□□□□ -0.59
TTC39C-208ENST00000584095 OATP04181 439 aa11.34□□□□□ -0.59
TTC39C-208ENST00000584095 NLRP7Q8WX94 980 aa11.34□□□□□ -0.59
TTC39C-208ENST00000584095 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
TTC39C-208ENST00000584095 PXYLP1Q8TE99 480 aa11.33□□□□□ -0.6
TTC39C-208ENST00000584095 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
TTC39C-208ENST00000584095 SUPT5HO00267 1087 aaKnown RBP11.31□□□□□ -0.6
TTC39C-208ENST00000584095 SSTR3P32745 418 aaPredicted RBP11.31□□□□□ -0.6
TTC39C-208ENST00000584095 PRSS12P56730 875 aa11.31□□□□□ -0.6
TTC39C-208ENST00000584095 MAMSTRQ6ZN01 415 aa11.31□□□□□ -0.6
TTC39C-208ENST00000584095 CDCA7LQ96GN5 454 aa11.3□□□□□ -0.6
TTC39C-208ENST00000584095 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
TTC39C-208ENST00000584095 SH3D19Q5HYK7 790 aa11.29□□□□□ -0.6
TTC39C-208ENST00000584095 COL9A1P20849 921 aa11.28□□□□□ -0.6
TTC39C-208ENST00000584095 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
TTC39C-208ENST00000584095 FAM198AQ9UFP1 575 aa11.28□□□□□ -0.6
TTC39C-208ENST00000584095 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
TTC39C-208ENST00000584095 BEGAINQ9BUH8 593 aa11.27□□□□□ -0.61
TTC39C-208ENST00000584095 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
TTC39C-208ENST00000584095 RBM46Q8TBY0 533 aaKnown RBP11.25□□□□□ -0.61
TTC39C-208ENST00000584095 ZMYND15Q9H091 742 aa11.25□□□□□ -0.61
TTC39C-208ENST00000584095 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
TTC39C-208ENST00000584095 PPP1R3GB7ZBB8 358 aa11.23□□□□□ -0.61
TTC39C-208ENST00000584095 ONECUT3O60422 494 aaPredicted RBP11.22□□□□□ -0.61
TTC39C-208ENST00000584095 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
TTC39C-208ENST00000584095 ARXQ96QS3 562 aa11.22□□□□□ -0.61
TTC39C-208ENST00000584095 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
TTC39C-208ENST00000584095 TSKSQ9UJT2 592 aa11.22□□□□□ -0.61
TTC39C-208ENST00000584095 C3orf80F5H4A9 247 aa11.21□□□□□ -0.61
TTC39C-208ENST00000584095 PTPREP23469 700 aa11.21□□□□□ -0.61
TTC39C-208ENST00000584095 SKIV2LQ15477 1246 aaKnown RBP11.21□□□□□ -0.61
TTC39C-208ENST00000584095 EYA1Q99502 592 aa11.21□□□□□ -0.61
TTC39C-208ENST00000584095 SNPHO15079 494 aa11.2□□□□□ -0.62
TTC39C-208ENST00000584095 FLIIQ13045 1269 aa11.2□□□□□ -0.62
TTC39C-208ENST00000584095 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.19□□□□□ -0.62
TTC39C-208ENST00000584095 RCCD1A6NED2 376 aa11.19□□□□□ -0.62
TTC39C-208ENST00000584095 MYSM1Q5VVJ2 828 aa11.18□□□□□ -0.62
TTC39C-208ENST00000584095 PROCA1Q8NCQ7 364 aaPredicted RBP11.17□□□□□ -0.62
TTC39C-208ENST00000584095 POLR3EQ9NVU0 708 aa11.17□□□□□ -0.62
TTC39C-208ENST00000584095 TRIM6-TRIM34B2RNG4 842 aa11.16□□□□□ -0.62
TTC39C-208ENST00000584095 NUDT18Q6ZVK8 323 aa11.16□□□□□ -0.62
TTC39C-208ENST00000584095 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
TTC39C-208ENST00000584095 TBC1D2Q9BYX2 928 aa11.14□□□□□ -0.63
TTC39C-208ENST00000584095 PNMA3Q9UL41 463 aa11.14□□□□□ -0.63
TTC39C-208ENST00000584095 CLK2P49760 499 aaKnown RBP11.13□□□□□ -0.63
TTC39C-208ENST00000584095 TATDN2Q93075 761 aa11.13□□□□□ -0.63
TTC39C-208ENST00000584095 KCNK17Q96T54 332 aa11.13□□□□□ -0.63
TTC39C-208ENST00000584095 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.13□□□□□ -0.63
TTC39C-208ENST00000584095 CD46P15529 392 aa11.12□□□□□ -0.63
TTC39C-208ENST00000584095 DNAJB2P25686 324 aa11.12□□□□□ -0.63
TTC39C-208ENST00000584095 PROX2Q3B8N5 592 aa11.12□□□□□ -0.63
TTC39C-208ENST00000584095 OTUD5Q96G74 571 aa11.12□□□□□ -0.63
TTC39C-208ENST00000584095 MCM6Q14566 821 aa11.11□□□□□ -0.63
TTC39C-208ENST00000584095 PACS2Q86VP3 889 aa11.11□□□□□ -0.63
TTC39C-208ENST00000584095 TMEM134Q9H6X4 195 aa11.11□□□□□ -0.63
TTC39C-208ENST00000584095 SMAPO00193 183 aa11.1□□□□□ -0.63
TTC39C-208ENST00000584095 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
TTC39C-208ENST00000584095 ATP1B4Q9UN42 357 aaPredicted RBP11.1□□□□□ -0.63
TTC39C-208ENST00000584095 DIXDC1Q155Q3 683 aa11.09□□□□□ -0.63
TTC39C-208ENST00000584095 DDX11L8A8MPP1 907 aa11.08□□□□□ -0.64
TTC39C-208ENST00000584095 FBXO31Q5XUX0 539 aaPredicted RBP11.08□□□□□ -0.64
TTC39C-208ENST00000584095 SULF1Q8IWU6 871 aa11.08□□□□□ -0.64
TTC39C-208ENST00000584095 HOMEZQ8IX15 550 aa11.08□□□□□ -0.64
TTC39C-208ENST00000584095 LIMD1Q9UGP4 676 aa11.08□□□□□ -0.64
TTC39C-208ENST00000584095 CLUAP1Q96AJ1 413 aa11.07□□□□□ -0.64
TTC39C-208ENST00000584095 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
TTC39C-208ENST00000584095 C1orf115Q9H7X2 142 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms