RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 RBM26Q5T8P6 1007 aaKnown RBP9.34□□□□□ -0.91
SKA2-210ENST00000584089 PTPREP23469 700 aa9.33□□□□□ -0.92
SKA2-210ENST00000584089 LMOD2Q6P5Q4 547 aa9.33□□□□□ -0.92
SKA2-210ENST00000584089 KCNH8Q96L42 1107 aa9.32□□□□□ -0.92
SKA2-210ENST00000584089 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
SKA2-210ENST00000584089 TSR1Q2NL82 804 aaKnown RBP9.31□□□□□ -0.92
SKA2-210ENST00000584089 NUTM2FA1L443 756 aa9.3□□□□□ -0.92
SKA2-210ENST00000584089 POTEEQ6S8J3 1075 aa9.3□□□□□ -0.92
SKA2-210ENST00000584089 KCNK17Q96T54 332 aa9.3□□□□□ -0.92
SKA2-210ENST00000584089 GPIHBP1Q8IV16 184 aa9.29□□□□□ -0.92
SKA2-210ENST00000584089 PPP1R3GB7ZBB8 358 aa9.28□□□□□ -0.92
SKA2-210ENST00000584089 CERKQ8TCT0 537 aa9.28□□□□□ -0.92
SKA2-210ENST00000584089 FCHSD2O94868 740 aa9.27□□□□□ -0.93
SKA2-210ENST00000584089 PSEN2P49810 448 aa9.27□□□□□ -0.93
SKA2-210ENST00000584089 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
SKA2-210ENST00000584089 NPDC1Q9NQX5 325 aaPredicted RBP9.27□□□□□ -0.93
SKA2-210ENST00000584089 AXIN2Q9Y2T1 843 aa9.27□□□□□ -0.93
SKA2-210ENST00000584089 COL9A1P20849 921 aa9.26□□□□□ -0.93
SKA2-210ENST00000584089 PTGDRQ13258 359 aa9.26□□□□□ -0.93
SKA2-210ENST00000584089 CDAN1Q8IWY9 1227 aa9.25□□□□□ -0.93
SKA2-210ENST00000584089 GPR37O15354 613 aa9.24□□□□□ -0.93
SKA2-210ENST00000584089 SLC4A5Q9BY07 1137 aa9.24□□□□□ -0.93
SKA2-210ENST00000584089 LSM11P83369 360 aaKnown RBP eCLIP9.23□□□□□ -0.93
SKA2-210ENST00000584089 HIC1Q14526 733 aa9.23□□□□□ -0.93
SKA2-210ENST00000584089 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
SKA2-210ENST00000584089 ZC3H15Q8WU90 426 aaKnown RBP9.22□□□□□ -0.93
SKA2-210ENST00000584089 ZBED2Q9BTP6 218 aa9.22□□□□□ -0.93
SKA2-210ENST00000584089 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
SKA2-210ENST00000584089 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
SKA2-210ENST00000584089 PCDH10Q9P2E7 1040 aa9.22□□□□□ -0.93
SKA2-210ENST00000584089 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
SKA2-210ENST00000584089 TK2O00142 265 aa9.21□□□□□ -0.94
SKA2-210ENST00000584089 ONECUT3O60422 494 aaPredicted RBP9.21□□□□□ -0.94
SKA2-210ENST00000584089 PRSS12P56730 875 aa9.21□□□□□ -0.94
SKA2-210ENST00000584089 GNPATO15228 680 aa9.2□□□□□ -0.94
SKA2-210ENST00000584089 CDCA7LQ96GN5 454 aa9.2□□□□□ -0.94
SKA2-210ENST00000584089 TRIM6-TRIM34B2RNG4 842 aa9.18□□□□□ -0.94
SKA2-210ENST00000584089 ZMYND10O75800 440 aa9.18□□□□□ -0.94
SKA2-210ENST00000584089 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
SKA2-210ENST00000584089 TTC13Q8NBP0 860 aa9.18□□□□□ -0.94
SKA2-210ENST00000584089 VPS9D1Q9Y2B5 631 aa9.18□□□□□ -0.94
SKA2-210ENST00000584089 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
SKA2-210ENST00000584089 TSKSQ9UJT2 592 aa9.17□□□□□ -0.94
SKA2-210ENST00000584089 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
SKA2-210ENST00000584089 BARGINQ6ZT62 677 aa9.16□□□□□ -0.94
SKA2-210ENST00000584089 ANKRD13DQ6ZTN6 518 aa9.16□□□□□ -0.94
SKA2-210ENST00000584089 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
SKA2-210ENST00000584089 FAM198AQ9UFP1 575 aa9.15□□□□□ -0.94
SKA2-210ENST00000584089 RABGEF1Q9UJ41 708 aa9.15□□□□□ -0.94
SKA2-210ENST00000584089 FECHP22830 423 aa9.14□□□□□ -0.95
SKA2-210ENST00000584089 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
SKA2-210ENST00000584089 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
SKA2-210ENST00000584089 MAP2K5Q13163 448 aa9.13□□□□□ -0.95
SKA2-210ENST00000584089 TPRNQ4KMQ1 711 aa9.13□□□□□ -0.95
SKA2-210ENST00000584089 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
SKA2-210ENST00000584089 HRO43593 1189 aa9.12□□□□□ -0.95
SKA2-210ENST00000584089 BHMG1C9JSJ3 638 aaPredicted RBP9.11□□□□□ -0.95
SKA2-210ENST00000584089 KRI1Q8N9T8 703 aaKnown RBP9.11□□□□□ -0.95
SKA2-210ENST00000584089 NBPF3Q9H094 633 aa9.11□□□□□ -0.95
SKA2-210ENST00000584089 IRF6O14896 467 aa9.1□□□□□ -0.95
SKA2-210ENST00000584089 TATDN2Q93075 761 aa9.1□□□□□ -0.95
SKA2-210ENST00000584089 ADGRG1Q9Y653 693 aa9.1□□□□□ -0.95
SKA2-210ENST00000584089 OATP04181 439 aa9.09□□□□□ -0.95
SKA2-210ENST00000584089 NUDT18Q6ZVK8 323 aa9.09□□□□□ -0.95
SKA2-210ENST00000584089 LAPTM4BQ86VI4 370 aa9.08□□□□□ -0.96
SKA2-210ENST00000584089 RBM46Q8TBY0 533 aaKnown RBP9.08□□□□□ -0.96
SKA2-210ENST00000584089 STAC3Q96MF2 364 aa9.08□□□□□ -0.96
SKA2-210ENST00000584089 EYA1Q99502 592 aa9.08□□□□□ -0.96
SKA2-210ENST00000584089 PNMA3Q9UL41 463 aa9.08□□□□□ -0.96
SKA2-210ENST00000584089 C3orf80F5H4A9 247 aa9.07□□□□□ -0.96
SKA2-210ENST00000584089 MRPL50Q8N5N7 158 aaKnown RBP9.07□□□□□ -0.96
SKA2-210ENST00000584089 FAM161AQ3B820 660 aa9.06□□□□□ -0.96
SKA2-210ENST00000584089 PXYLP1Q8TE99 480 aa9.06□□□□□ -0.96
SKA2-210ENST00000584089 CCDC102AQ96A19 550 aa9.06□□□□□ -0.96
SKA2-210ENST00000584089 SEPT9Q9UHD8 586 aaPredicted RBP9.06□□□□□ -0.96
SKA2-210ENST00000584089 SMAPO00193 183 aa9.05□□□□□ -0.96
SKA2-210ENST00000584089 FAM98CQ17RN3 349 aaKnown RBP9.05□□□□□ -0.96
SKA2-210ENST00000584089 METTL3Q86U44 580 aaKnown RBP9.05□□□□□ -0.96
SKA2-210ENST00000584089 AK7Q96M32 723 aa9.05□□□□□ -0.96
SKA2-210ENST00000584089 SLC24A3Q9HC58 644 aa9.04□□□□□ -0.96
SKA2-210ENST00000584089 PRKCSHP14314 528 aaPredicted RBP9.03□□□□□ -0.96
SKA2-210ENST00000584089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.02□□□□□ -0.97
SKA2-210ENST00000584089 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.97
SKA2-210ENST00000584089 RCCD1A6NED2 376 aa9.01□□□□□ -0.97
SKA2-210ENST00000584089 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
SKA2-210ENST00000584089 DNAJB2P25686 324 aa9.01□□□□□ -0.97
SKA2-210ENST00000584089 ZFRQ96KR1 1074 aaKnown RBP9.01□□□□□ -0.97
SKA2-210ENST00000584089 PHOX2BQ99453 314 aa9□□□□□ -0.97
SKA2-210ENST00000584089 TRIM66O15016 1216 aa8.99□□□□□ -0.97
SKA2-210ENST00000584089 HDGFP51858 240 aaKnown RBP8.99□□□□□ -0.97
SKA2-210ENST00000584089 MYT1LQ9UL68 1186 aa8.99□□□□□ -0.97
SKA2-210ENST00000584089 AMHR2Q16671 573 aa8.98□□□□□ -0.97
SKA2-210ENST00000584089 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
SKA2-210ENST00000584089 ANKK1Q8NFD2 765 aa8.97□□□□□ -0.97
SKA2-210ENST00000584089 WNT2BQ93097 391 aa8.97□□□□□ -0.97
SKA2-210ENST00000584089 SAMD7Q7Z3H4 446 aa8.96□□□□□ -0.98
SKA2-210ENST00000584089 SWT1Q5T5J6 900 aaKnown RBP8.95□□□□□ -0.98
SKA2-210ENST00000584089 LRCH3Q96II8 777 aa8.95□□□□□ -0.98
SKA2-210ENST00000584089 DAXXQ9UER7 740 aaPredicted RBP8.95□□□□□ -0.98
SKA2-210ENST00000584089 SOWAHBA6NEL2 793 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms