RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 KDM5DQ9BY66 1539 aa32.75■■■□□ 2.83
SRSF1-206ENST00000583741 KIF3BO15066 747 aa32.74■■■□□ 2.83
SRSF1-206ENST00000583741 POLR1AO95602 1720 aaPredicted RBP32.72■■■□□ 2.83
SRSF1-206ENST00000583741 PZPP20742 1482 aa32.71■■■□□ 2.83
SRSF1-206ENST00000583741 FAM135AQ9P2D6 1515 aa32.71■■■□□ 2.83
SRSF1-206ENST00000583741 FBXO31Q5XUX0 539 aaPredicted RBP32.71■■■□□ 2.83
SRSF1-206ENST00000583741 TNRQ92752 1358 aa32.69■■■□□ 2.82
SRSF1-206ENST00000583741 NEURL4Q96JN8 1562 aa32.69■■■□□ 2.82
SRSF1-206ENST00000583741 ARHGEF5Q12774 1597 aa32.69■■■□□ 2.82
SRSF1-206ENST00000583741 UBAP1LF5GYI3 381 aa32.68■■■□□ 2.82
SRSF1-206ENST00000583741 SOCS7O14512 581 aa32.65■■■□□ 2.82
SRSF1-206ENST00000583741 RSPH4AQ5TD94 716 aa32.64■■■□□ 2.82
SRSF1-206ENST00000583741 WASHC2CQ9Y4E1 1318 aa32.62■■■□□ 2.81
SRSF1-206ENST00000583741 LRRC9Q6ZRR7 1453 aa32.57■■■□□ 2.8
SRSF1-206ENST00000583741 RNF17Q9BXT8 1623 aaKnown RBP32.57■■■□□ 2.8
SRSF1-206ENST00000583741 MIA2Q96PC5 1412 aa32.56■■■□□ 2.8
SRSF1-206ENST00000583741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.55■■■□□ 2.8
SRSF1-206ENST00000583741 NLRP1Q9C000 1473 aa32.55■■■□□ 2.8
SRSF1-206ENST00000583741 MAST1Q9Y2H9 1570 aa32.54■■■□□ 2.8
SRSF1-206ENST00000583741 VPS8Q8N3P4 1428 aa32.54■■■□□ 2.8
SRSF1-206ENST00000583741 TSPY4P0CV99 314 aa32.54■■■□□ 2.8
SRSF1-206ENST00000583741 TSPY10P0CW01 314 aa32.54■■■□□ 2.8
SRSF1-206ENST00000583741 CPS1P31327 1500 aa32.54■■■□□ 2.8
SRSF1-206ENST00000583741 UGGT1Q9NYU2 1555 aa32.53■■■□□ 2.8
SRSF1-206ENST00000583741 SHANK2Q9UPX8 1470 aa32.53■■■□□ 2.8
SRSF1-206ENST00000583741 ABCC3O15438 1527 aa32.51■■■□□ 2.79
SRSF1-206ENST00000583741 ZC3H13Q5T200 1668 aaKnown RBP32.5■■■□□ 2.79
SRSF1-206ENST00000583741 VWDEQ8N2E2 1590 aa32.5■■■□□ 2.79
SRSF1-206ENST00000583741 DEPDC5O75140 1603 aa32.49■■■□□ 2.79
SRSF1-206ENST00000583741 EIF2AK4Q9P2K8 1649 aaKnown RBP32.48■■■□□ 2.79
SRSF1-206ENST00000583741 ANKLE2Q86XL3 938 aa32.48■■■□□ 2.79
SRSF1-206ENST00000583741 MROH1Q8NDA8 1641 aa32.47■■■□□ 2.79
SRSF1-206ENST00000583741 THEMISQ8N1K5 641 aaPredicted RBP32.47■■■□□ 2.79
SRSF1-206ENST00000583741 MED14O60244 1454 aa32.46■■■□□ 2.79
SRSF1-206ENST00000583741 NPHP4O75161 1426 aaPredicted RBP32.44■■■□□ 2.78
SRSF1-206ENST00000583741 KANK4Q5T7N3 995 aaPredicted RBP32.43■■■□□ 2.78
SRSF1-206ENST00000583741 IQGAP1P46940 1657 aa32.43■■■□□ 2.78
SRSF1-206ENST00000583741 CEP152O94986 1710 aa32.42■■■□□ 2.78
SRSF1-206ENST00000583741 SCAF1Q9H7N4 1312 aaKnown RBP32.41■■■□□ 2.78
SRSF1-206ENST00000583741 LOC105371045A0A1W2PR82 267 aa32.41■■■□□ 2.78
SRSF1-206ENST00000583741 ERVK-7P63135 1459 aa32.41■■■□□ 2.78
SRSF1-206ENST00000583741 MAP3K1Q13233 1512 aa32.4■■■□□ 2.78
SRSF1-206ENST00000583741 MYOM3Q5VTT5 1437 aa32.4■■■□□ 2.78
SRSF1-206ENST00000583741 PIP4K2BP78356 416 aa32.4■■■□□ 2.78
SRSF1-206ENST00000583741 HSPA1LP34931 641 aa32.39■■■□□ 2.78
SRSF1-206ENST00000583741 ALKQ9UM73 1620 aa32.38■■■□□ 2.77
SRSF1-206ENST00000583741 STRCP1A6NGW2 1772 aa32.37■■■□□ 2.77
SRSF1-206ENST00000583741 CFAP65Q6ZU64 1925 aaKnown RBP32.37■■■□□ 2.77
SRSF1-206ENST00000583741 TOM1O60784 492 aa32.36■■■□□ 2.77
SRSF1-206ENST00000583741 UBR1Q8IWV7 1749 aa32.34■■■□□ 2.77
SRSF1-206ENST00000583741 DUOX2Q9NRD8 1548 aa32.33■■■□□ 2.77
SRSF1-206ENST00000583741 MED1Q15648 1581 aaPredicted RBP32.32■■■□□ 2.76
SRSF1-206ENST00000583741 CROCC2H7BZ55 1655 aa32.31■■■□□ 2.76
SRSF1-206ENST00000583741 PRDM15P57071 1507 aaPredicted RBP32.28■■■□□ 2.76
SRSF1-206ENST00000583741 LRRC7Q96NW7 1537 aa32.25■■■□□ 2.75
SRSF1-206ENST00000583741 SYNMO15061 1565 aa32.25■■■□□ 2.75
SRSF1-206ENST00000583741 KIF15Q9NS87 1388 aa32.24■■■□□ 2.75
SRSF1-206ENST00000583741 ABCC5O15440 1437 aa32.22■■■□□ 2.75
SRSF1-206ENST00000583741 PTPN23Q9H3S7 1636 aa32.22■■■□□ 2.75
SRSF1-206ENST00000583741 SCAF11Q99590 1463 aaKnown RBP32.21■■■□□ 2.75
SRSF1-206ENST00000583741 ERBINQ96RT1 1412 aa32.21■■■□□ 2.75
SRSF1-206ENST00000583741 ARHGAP31Q2M1Z3 1444 aa32.2■■■□□ 2.74
SRSF1-206ENST00000583741 ARHGAP23Q9P227 1491 aa32.19■■■□□ 2.74
SRSF1-206ENST00000583741 SLIT1O75093 1534 aa32.18■■■□□ 2.74
SRSF1-206ENST00000583741 RRP7BPQ9NSQ0 103 aa32.16■■■□□ 2.74
SRSF1-206ENST00000583741 PIK3C2BO00750 1634 aa32.15■■■□□ 2.74
SRSF1-206ENST00000583741 LTKP29376 864 aa32.15■■■□□ 2.74
SRSF1-206ENST00000583741 DAPK1P53355 1430 aa32.14■■■□□ 2.74
SRSF1-206ENST00000583741 XIRP1Q702N8 1843 aaKnown RBP32.11■■■□□ 2.73
SRSF1-206ENST00000583741 TXNDC2Q86VQ3 553 aa32.1■■■□□ 2.73
SRSF1-206ENST00000583741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.1■■■□□ 2.731e-15■■□□□ 13.7
SRSF1-206ENST00000583741 SENP3Q9H4L4 574 aaPredicted RBP32.09■■■□□ 2.73
SRSF1-206ENST00000583741 FGD6Q6ZV73 1430 aa32.08■■■□□ 2.73
SRSF1-206ENST00000583741 KDM5AP29375 1690 aaKnown RBP32.03■■■□□ 2.72
SRSF1-206ENST00000583741 LMTK2Q8IWU2 1503 aa32.03■■■□□ 2.72
SRSF1-206ENST00000583741 TMEM2Q9UHN6 1383 aa32.03■■■□□ 2.72
SRSF1-206ENST00000583741 KANK1Q14678 1352 aa32.02■■■□□ 2.72
SRSF1-206ENST00000583741 APLP2Q06481 763 aa32.01■■■□□ 2.71
SRSF1-206ENST00000583741 EID1Q9Y6B2 187 aa32.01■■■□□ 2.71
SRSF1-206ENST00000583741 EFCAB6Q5THR3 1501 aa32■■■□□ 2.71
SRSF1-206ENST00000583741 PHF23Q9BUL5 403 aaPredicted RBP31.99■■■□□ 2.71
SRSF1-206ENST00000583741 CHIC2Q9UKJ5 165 aa31.99■■■□□ 2.71
SRSF1-206ENST00000583741 ANKRD30AQ9BXX3 1397 aa31.98■■■□□ 2.71
SRSF1-206ENST00000583741 IDI1Q13907 227 aa31.95■■■□□ 2.7
SRSF1-206ENST00000583741 STAG3Q9UJ98 1225 aa31.95■■■□□ 2.7
SRSF1-206ENST00000583741 NOS1P29475 1434 aa31.92■■■□□ 2.7
SRSF1-206ENST00000583741 TET3O43151 1660 aa31.92■■■□□ 2.7
SRSF1-206ENST00000583741 ADGRB3O60242 1522 aa31.91■■■□□ 2.7
SRSF1-206ENST00000583741 ADGRL2O95490 1459 aa31.89■■■□□ 2.7
SRSF1-206ENST00000583741 TMEM94Q12767 1356 aa31.87■■■□□ 2.69
SRSF1-206ENST00000583741 SLC26A8Q96RN1 970 aa31.84■■■□□ 2.69
SRSF1-206ENST00000583741 KCNA6P17658 529 aa31.83■■■□□ 2.69
SRSF1-206ENST00000583741 FAM135BQ49AJ0 1406 aa31.83■■■□□ 2.69
SRSF1-206ENST00000583741 NWD1Q149M9 1564 aa31.82■■■□□ 2.68
SRSF1-206ENST00000583741 MYO5BQ9ULV0 1848 aa31.81■■■□□ 2.68
SRSF1-206ENST00000583741 ROBO1Q9Y6N7 1651 aa31.8■■■□□ 2.68
SRSF1-206ENST00000583741 RBM33Q96EV2 1170 aaKnown RBP31.79■■■□□ 2.68
SRSF1-206ENST00000583741 RGS17Q9UGC6 210 aaPredicted RBP31.78■■■□□ 2.68
SRSF1-206ENST00000583741 ANKRD50Q9ULJ7 1429 aa31.78■■■□□ 2.68
SRSF1-206ENST00000583741 RPRD2Q5VT52 1461 aaKnown RBP31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms