RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 NUP153P49790 1475 aaKnown RBP7.63□□□□□ -1.19
RTTN-209ENST00000583043 GPATCH8Q9UKJ3 1502 aaKnown RBP7.63□□□□□ -1.19
RTTN-209ENST00000583043 ARHGEF11O15085 1522 aa7.63□□□□□ -1.19
RTTN-209ENST00000583043 RPGRIP1LQ68CZ1 1315 aa7.62□□□□□ -1.19
RTTN-209ENST00000583043 CALD1Q05682 793 aaKnown RBP7.62□□□□□ -1.19
RTTN-209ENST00000583043 DNMT1P26358 1616 aaKnown RBP7.62□□□□□ -1.19
RTTN-209ENST00000583043 PBRM1Q86U86 1689 aa7.61□□□□□ -1.19
RTTN-209ENST00000583043 BECN1Q14457 450 aa7.61□□□□□ -1.19
RTTN-209ENST00000583043 INSRP06213 1382 aa7.61□□□□□ -1.19
RTTN-209ENST00000583043 TEX14Q8IWB6 1497 aa7.61□□□□□ -1.19
RTTN-209ENST00000583043 ERBINQ96RT1 1412 aa7.61□□□□□ -1.19
RTTN-209ENST00000583043 VGFO15240 615 aaPredicted RBP7.6□□□□□ -1.19
RTTN-209ENST00000583043 CHMP4AQ9BY43 222 aa7.6□□□□□ -1.19
RTTN-209ENST00000583043 RCAN3Q9UKA8 241 aa7.6□□□□□ -1.19
RTTN-209ENST00000583043 GCC2Q8IWJ2 1684 aa7.6□□□□□ -1.19
RTTN-209ENST00000583043 ST20-MTHFSA0A0A6YYL1 179 aa7.6□□□□□ -1.19
RTTN-209ENST00000583043 FOXD1Q16676 465 aa7.59□□□□□ -1.19
RTTN-209ENST00000583043 FANCIQ9NVI1 1328 aa7.59□□□□□ -1.19
RTTN-209ENST00000583043 RALGAPBQ86X10 1494 aa7.59□□□□□ -1.19
RTTN-209ENST00000583043 DISP1Q96F81 1524 aa7.59□□□□□ -1.19
RTTN-209ENST00000583043 ZNF644Q9H582 1327 aaPredicted RBP7.59□□□□□ -1.19
RTTN-209ENST00000583043 KIF3BO15066 747 aa7.59□□□□□ -1.19
RTTN-209ENST00000583043 ZNF608Q9ULD9 1512 aaPredicted RBP7.59□□□□□ -1.19
RTTN-209ENST00000583043 RTEL1-TNFRSF6BF6WH68 1400 aa7.58□□□□□ -1.2
RTTN-209ENST00000583043 MAPK8IP3Q9UPT6 1336 aa7.58□□□□□ -1.2
RTTN-209ENST00000583043 OSCARQ8IYS5 282 aa7.58□□□□□ -1.2
RTTN-209ENST00000583043 SMG6Q86US8 1419 aaKnown RBP7.58□□□□□ -1.2
RTTN-209ENST00000583043 UHRF1BP1Q6BDS2 1440 aa7.58□□□□□ -1.2
RTTN-209ENST00000583043 DUOX2Q9NRD8 1548 aa7.58□□□□□ -1.2
RTTN-209ENST00000583043 NINLQ9Y2I6 1382 aa7.58□□□□□ -1.2
RTTN-209ENST00000583043 MYH16Q9H6N6 1097 aa7.58□□□□□ -1.2
RTTN-209ENST00000583043 PLB1Q6P1J6 1458 aa7.58□□□□□ -1.2
RTTN-209ENST00000583043 TERF2IPQ9NYB0 399 aa7.57□□□□□ -1.2
RTTN-209ENST00000583043 EIF4G3O43432 1585 aaKnown RBP7.57□□□□□ -1.2
RTTN-209ENST00000583043 ARHGEF5Q12774 1597 aa7.57□□□□□ -1.2
RTTN-209ENST00000583043 GOLGA2Q08379 1002 aa7.57□□□□□ -1.2
RTTN-209ENST00000583043 HDGFL2Q7Z4V5 671 aaPredicted RBP7.57□□□□□ -1.2
RTTN-209ENST00000583043 MORC1Q86VD1 984 aa7.57□□□□□ -1.2
RTTN-209ENST00000583043 PTPRKQ15262 1439 aa7.57□□□□□ -1.2
RTTN-209ENST00000583043 CGNL1Q0VF96 1302 aa7.57□□□□□ -1.2
RTTN-209ENST00000583043 EIF2AK4Q9P2K8 1649 aaKnown RBP7.57□□□□□ -1.2
RTTN-209ENST00000583043 ATP10BO94823 1461 aa7.56□□□□□ -1.2
RTTN-209ENST00000583043 PLCH2O75038 1416 aa7.56□□□□□ -1.2
RTTN-209ENST00000583043 TSHZ2Q9NRE2 1034 aa7.56□□□□□ -1.2
RTTN-209ENST00000583043 IPO8O15397 1037 aaKnown RBP7.56□□□□□ -1.2
RTTN-209ENST00000583043 POGKQ9P215 609 aa7.56□□□□□ -1.2
RTTN-209ENST00000583043 PPP6R1Q9UPN7 881 aa7.55□□□□□ -1.2
RTTN-209ENST00000583043 RBM19Q9Y4C8 960 aaKnown RBP7.55□□□□□ -1.2
RTTN-209ENST00000583043 EVC2Q86UK5 1308 aa7.55□□□□□ -1.2
RTTN-209ENST00000583043 E9PSI1 815 aa7.55□□□□□ -1.2
RTTN-209ENST00000583043 PUS7Q96PZ0 661 aaKnown RBP7.54□□□□□ -1.2
RTTN-209ENST00000583043 PMFBP1Q8TBY8 1022 aa7.54□□□□□ -1.2
RTTN-209ENST00000583043 NOP58Q9Y2X3 529 aaKnown RBP7.54□□□□□ -1.2
RTTN-209ENST00000583043 LMOD3Q0VAK6 560 aa7.54□□□□□ -1.2
RTTN-209ENST00000583043 CC2D1BQ5T0F9 858 aaKnown RBP7.54□□□□□ -1.2
RTTN-209ENST00000583043 NBPF8Q3BBV2 869 aa7.53□□□□□ -1.2
RTTN-209ENST00000583043 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.53□□□□□ -1.2
RTTN-209ENST00000583043 UHRF1BP1LA0JNW5 1464 aa7.53□□□□□ -1.2
RTTN-209ENST00000583043 ABCC2Q92887 1545 aa7.53□□□□□ -1.2
RTTN-209ENST00000583043 PANK3Q9H999 370 aa7.53□□□□□ -1.2
RTTN-209ENST00000583043 SLC52A1Q9NWF4 448 aa7.53□□□□□ -1.2
RTTN-209ENST00000583043 USP35Q9P2H5 1018 aa7.53□□□□□ -1.2
RTTN-209ENST00000583043 CT47B1P0C2W7 299 aaPredicted RBP7.52□□□□□ -1.2
RTTN-209ENST00000583043 CENPQQ7L2Z9 268 aaPredicted RBP7.52□□□□□ -1.2
RTTN-209ENST00000583043 PTMSP20962 102 aa7.52□□□□□ -1.21
RTTN-209ENST00000583043 CENPJQ9HC77 1338 aaPredicted RBP7.52□□□□□ -1.21
RTTN-209ENST00000583043 ADGBQ8N7X0 1667 aa7.52□□□□□ -1.21
RTTN-209ENST00000583043 RRP1P56182 461 aaKnown RBP7.52□□□□□ -1.21
RTTN-209ENST00000583043 TRHP20396 242 aaPredicted RBP7.51□□□□□ -1.21
RTTN-209ENST00000583043 RWDD1Q9H446 243 aaPredicted RBP7.51□□□□□ -1.21
RTTN-209ENST00000583043 KDM5DQ9BY66 1539 aa7.51□□□□□ -1.21
RTTN-209ENST00000583043 ABCA8O94911 1581 aa7.51□□□□□ -1.21
RTTN-209ENST00000583043 WDR7Q9Y4E6 1490 aa7.51□□□□□ -1.21
RTTN-209ENST00000583043 FTSJ3Q8IY81 847 aaKnown RBP7.51□□□□□ -1.21
RTTN-209ENST00000583043 PNISRQ8TF01 805 aaKnown RBP7.51□□□□□ -1.21
RTTN-209ENST00000583043 PLPPR3Q6T4P5 718 aa7.51□□□□□ -1.21
RTTN-209ENST00000583043 ADCY10Q96PN6 1610 aa7.5□□□□□ -1.21
RTTN-209ENST00000583043 FAM135AQ9P2D6 1515 aa7.5□□□□□ -1.21
RTTN-209ENST00000583043 NSD2O96028 1365 aa7.5□□□□□ -1.21
RTTN-209ENST00000583043 DHX29Q7Z478 1369 aaKnown RBP7.5□□□□□ -1.21
RTTN-209ENST00000583043 SCAF11Q99590 1463 aaKnown RBP7.5□□□□□ -1.21
RTTN-209ENST00000583043 ARAP3Q8WWN8 1544 aa7.5□□□□□ -1.21
RTTN-209ENST00000583043 PZPP20742 1482 aa7.5□□□□□ -1.21
RTTN-209ENST00000583043 GPRASP1Q5JY77 1395 aa7.49□□□□□ -1.21
RTTN-209ENST00000583043 GGT6Q6P531 493 aa7.49□□□□□ -1.21
RTTN-209ENST00000583043 NPC1L1Q9UHC9 1359 aa7.49□□□□□ -1.21
RTTN-209ENST00000583043 ZMYM4Q5VZL5 1548 aa7.49□□□□□ -1.21
RTTN-209ENST00000583043 ABCC10Q5T3U5 1492 aa7.49□□□□□ -1.21
RTTN-209ENST00000583043 IRX6P78412 446 aaPredicted RBP7.49□□□□□ -1.21
RTTN-209ENST00000583043 CASC1Q6TDU7 716 aa7.49□□□□□ -1.21
RTTN-209ENST00000583043 ANP32BQ92688 251 aaKnown RBP7.49□□□□□ -1.21
RTTN-209ENST00000583043 NCBP3Q53F19 620 aaKnown RBP7.48□□□□□ -1.21
RTTN-209ENST00000583043 B4GALNT3Q6L9W6 998 aa7.48□□□□□ -1.21
RTTN-209ENST00000583043 IPO9Q96P70 1041 aaKnown RBP7.48□□□□□ -1.21
RTTN-209ENST00000583043 SALL2Q9Y467 1007 aaPredicted RBP7.48□□□□□ -1.21
RTTN-209ENST00000583043 HDAC5Q9UQL6 1122 aa7.48□□□□□ -1.21
RTTN-209ENST00000583043 SRPK2P78362 688 aaKnown RBP7.48□□□□□ -1.21
RTTN-209ENST00000583043 NPM2Q86SE8 214 aaKnown RBP7.48□□□□□ -1.21
RTTN-209ENST00000583043 PRAG1Q86YV5 1406 aa7.47□□□□□ -1.21
RTTN-209ENST00000583043 ADGRL1O94910 1474 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms