RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
KPNB1-213ENST00000583013 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
KPNB1-213ENST00000583013 TCOF1Q13428 1488 aaKnown RBP12.62□□□□□ -0.39
KPNB1-213ENST00000583013 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
KPNB1-213ENST00000583013 DNMT1P26358 1616 aaKnown RBP12.6□□□□□ -0.39
KPNB1-213ENST00000583013 MLECQ14165 292 aa12.6□□□□□ -0.39
KPNB1-213ENST00000583013 MROH2AA6NES4 1674 aa12.6□□□□□ -0.39
KPNB1-213ENST00000583013 DHX29Q7Z478 1369 aaKnown RBP12.58□□□□□ -0.4
KPNB1-213ENST00000583013 C3P01024 1663 aa12.57□□□□□ -0.4
KPNB1-213ENST00000583013 CNTLNQ9NXG0 1405 aa12.57□□□□□ -0.4
KPNB1-213ENST00000583013 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
KPNB1-213ENST00000583013 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
KPNB1-213ENST00000583013 ABCC5O15440 1437 aa12.56□□□□□ -0.4
KPNB1-213ENST00000583013 DAPK1P53355 1430 aa12.56□□□□□ -0.4
KPNB1-213ENST00000583013 EIF2AK4Q9P2K8 1649 aaKnown RBP12.56□□□□□ -0.4
KPNB1-213ENST00000583013 FAM135AQ9P2D6 1515 aa12.56□□□□□ -0.4
KPNB1-213ENST00000583013 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
KPNB1-213ENST00000583013 RNF17Q9BXT8 1623 aaKnown RBP12.55□□□□□ -0.4
KPNB1-213ENST00000583013 CLTCQ00610 1675 aaKnown RBP12.54□□□□□ -0.4
KPNB1-213ENST00000583013 PREX1Q8TCU6 1659 aa12.54□□□□□ -0.4
KPNB1-213ENST00000583013 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
KPNB1-213ENST00000583013 DUOX2Q9NRD8 1548 aa12.53□□□□□ -0.4
KPNB1-213ENST00000583013 ESF1Q9H501 851 aaKnown RBP12.51□□□□□ -0.41
KPNB1-213ENST00000583013 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
KPNB1-213ENST00000583013 KDM5DQ9BY66 1539 aa12.51□□□□□ -0.41
KPNB1-213ENST00000583013 ZC3H13Q5T200 1668 aaKnown RBP12.51□□□□□ -0.41
KPNB1-213ENST00000583013 ERBINQ96RT1 1412 aa12.5□□□□□ -0.41
KPNB1-213ENST00000583013 ADGRL2O95490 1459 aa12.5□□□□□ -0.41
KPNB1-213ENST00000583013 MROH1Q8NDA8 1641 aa12.49□□□□□ -0.41
KPNB1-213ENST00000583013 NPATQ14207 1427 aa12.49□□□□□ -0.41
KPNB1-213ENST00000583013 KIF15Q9NS87 1388 aa12.49□□□□□ -0.41
KPNB1-213ENST00000583013 CEBPAP49715 358 aaPredicted RBP12.49□□□□□ -0.41
KPNB1-213ENST00000583013 GGT6Q6P531 493 aa12.49□□□□□ -0.41
KPNB1-213ENST00000583013 DEPDC5O75140 1603 aa12.48□□□□□ -0.41
KPNB1-213ENST00000583013 ZMYM3Q14202 1370 aa12.48□□□□□ -0.41
KPNB1-213ENST00000583013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.48□□□□□ -0.41
KPNB1-213ENST00000583013 KIF3BO15066 747 aa12.48□□□□□ -0.41
KPNB1-213ENST00000583013 CAPN15O75808 1086 aa12.48□□□□□ -0.41
KPNB1-213ENST00000583013 SETD1BQ9UPS6 1966 aaKnown RBP12.48□□□□□ -0.41
KPNB1-213ENST00000583013 PRDM15P57071 1507 aaPredicted RBP12.47□□□□□ -0.41
KPNB1-213ENST00000583013 ANKRD30AQ9BXX3 1397 aa12.47□□□□□ -0.41
KPNB1-213ENST00000583013 NCOA1Q15788 1441 aa12.46□□□□□ -0.41
KPNB1-213ENST00000583013 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.41
KPNB1-213ENST00000583013 PTPRKQ15262 1439 aa12.45□□□□□ -0.42
KPNB1-213ENST00000583013 ZNF142P52746 1687 aaPredicted RBP12.45□□□□□ -0.42
KPNB1-213ENST00000583013 MYO3AQ8NEV4 1616 aa12.45□□□□□ -0.42
KPNB1-213ENST00000583013 FAM50AQ14320 339 aaKnown RBP12.45□□□□□ -0.42
KPNB1-213ENST00000583013 ABCC3O15438 1527 aa12.45□□□□□ -0.42
KPNB1-213ENST00000583013 PZPP20742 1482 aa12.45□□□□□ -0.42
KPNB1-213ENST00000583013 CEP152O94986 1710 aa12.44□□□□□ -0.42
KPNB1-213ENST00000583013 RRBP1Q9P2E9 1410 aaKnown RBP12.44□□□□□ -0.42
KPNB1-213ENST00000583013 PPARGC1BQ86YN6 1023 aaKnown RBP12.43□□□□□ -0.42
KPNB1-213ENST00000583013 RRP7BPQ9NSQ0 103 aa12.43□□□□□ -0.42
KPNB1-213ENST00000583013 CAMSAP1Q5T5Y3 1602 aa12.43□□□□□ -0.42
KPNB1-213ENST00000583013 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
KPNB1-213ENST00000583013 CHIC2Q9UKJ5 165 aa12.42□□□□□ -0.42
KPNB1-213ENST00000583013 ROCK1Q13464 1354 aa12.42□□□□□ -0.42
KPNB1-213ENST00000583013 VWDEQ8N2E2 1590 aa12.41□□□□□ -0.42
KPNB1-213ENST00000583013 CEP170BQ9Y4F5 1589 aaPredicted RBP12.4□□□□□ -0.42
KPNB1-213ENST00000583013 HSPA2P54652 639 aa12.4□□□□□ -0.42
KPNB1-213ENST00000583013 SPATA31D1Q6ZQQ2 1576 aa12.39□□□□□ -0.43
KPNB1-213ENST00000583013 ANKRD50Q9ULJ7 1429 aa12.39□□□□□ -0.43
KPNB1-213ENST00000583013 STRCQ7RTU9 1775 aa12.39□□□□□ -0.43
KPNB1-213ENST00000583013 LMTK2Q8IWU2 1503 aa12.39□□□□□ -0.43
KPNB1-213ENST00000583013 UNC13BO14795 1591 aa12.38□□□□□ -0.43
KPNB1-213ENST00000583013 ARHGAP31Q2M1Z3 1444 aa12.37□□□□□ -0.43
KPNB1-213ENST00000583013 A2ML1A8K2U0 1454 aa12.37□□□□□ -0.43
KPNB1-213ENST00000583013 ERVK-7P63135 1459 aa12.36□□□□□ -0.43
KPNB1-213ENST00000583013 KANK1Q14678 1352 aa12.36□□□□□ -0.43
KPNB1-213ENST00000583013 TNRQ92752 1358 aa12.36□□□□□ -0.43
KPNB1-213ENST00000583013 EFCAB6Q5THR3 1501 aa12.36□□□□□ -0.43
KPNB1-213ENST00000583013 PLA2R1Q13018 1463 aa12.35□□□□□ -0.43
KPNB1-213ENST00000583013 NLRP1Q9C000 1473 aa12.35□□□□□ -0.43
KPNB1-213ENST00000583013 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
KPNB1-213ENST00000583013 GCC2Q8IWJ2 1684 aa12.34□□□□□ -0.43
KPNB1-213ENST00000583013 TET3O43151 1660 aa12.33□□□□□ -0.44
KPNB1-213ENST00000583013 FBXO31Q5XUX0 539 aaPredicted RBP12.33□□□□□ -0.44
KPNB1-213ENST00000583013 IQGAP3Q86VI3 1631 aa12.33□□□□□ -0.44
KPNB1-213ENST00000583013 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
KPNB1-213ENST00000583013 ITGAEP38570 1179 aa12.31□□□□□ -0.44
KPNB1-213ENST00000583013 RPRD2Q5VT52 1461 aaKnown RBP12.31□□□□□ -0.44
KPNB1-213ENST00000583013 POLR1AO95602 1720 aaPredicted RBP12.31□□□□□ -0.44
KPNB1-213ENST00000583013 PTPRTO14522 1441 aa12.3□□□□□ -0.44
KPNB1-213ENST00000583013 ATXN8OSP0DMR3 200 aa12.3□□□□□ -0.44
KPNB1-213ENST00000583013 UGGT1Q9NYU2 1555 aa12.3□□□□□ -0.44
KPNB1-213ENST00000583013 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
KPNB1-213ENST00000583013 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
KPNB1-213ENST00000583013 DSG3P32926 999 aa12.29□□□□□ -0.44
KPNB1-213ENST00000583013 CFAP65Q6ZU64 1925 aaKnown RBP12.29□□□□□ -0.44
KPNB1-213ENST00000583013 NOS1P29475 1434 aa12.28□□□□□ -0.44
KPNB1-213ENST00000583013 NAIPQ13075 1403 aa12.28□□□□□ -0.44
KPNB1-213ENST00000583013 SYNMO15061 1565 aa12.28□□□□□ -0.44
KPNB1-213ENST00000583013 HFM1A2PYH4 1435 aa12.28□□□□□ -0.44
KPNB1-213ENST00000583013 E9PCH4 1651 aa12.27□□□□□ -0.45
KPNB1-213ENST00000583013 NEURL4Q96JN8 1562 aa12.26□□□□□ -0.45
KPNB1-213ENST00000583013 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
KPNB1-213ENST00000583013 PKD2Q13563 968 aa12.26□□□□□ -0.45
KPNB1-213ENST00000583013 ADGRB3O60242 1522 aa12.23□□□□□ -0.45
KPNB1-213ENST00000583013 SLIT1O75093 1534 aa12.23□□□□□ -0.45
KPNB1-213ENST00000583013 MED14O60244 1454 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms