RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 MAGI2Q86UL8 1455 aa24.29■■□□□ 1.48
ERBB2-212ENST00000582788 IQGAP3Q86VI3 1631 aa24.29■■□□□ 1.48
ERBB2-212ENST00000582788 CFAP74Q9C0B2 1584 aa24.28■■□□□ 1.48
ERBB2-212ENST00000582788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.28■■□□□ 1.48
ERBB2-212ENST00000582788 GLI2P10070 1586 aa24.28■■□□□ 1.48
ERBB2-212ENST00000582788 TSPOAP1O95153 1857 aa24.25■■□□□ 1.47
ERBB2-212ENST00000582788 HIRIP3Q9BW71 556 aaPredicted RBP24.24■■□□□ 1.47
ERBB2-212ENST00000582788 ZNF518AQ6AHZ1 1483 aa24.23■■□□□ 1.47
ERBB2-212ENST00000582788 CCER2I3L3R5 266 aa24.22■■□□□ 1.47
ERBB2-212ENST00000582788 KIDINS220Q9ULH0 1771 aa24.21■■□□□ 1.47
ERBB2-212ENST00000582788 NBPF8Q3BBV2 869 aa24.2■■□□□ 1.46
ERBB2-212ENST00000582788 MYT1LQ9UL68 1186 aa24.2■■□□□ 1.46
ERBB2-212ENST00000582788 MAP3K4Q9Y6R4 1608 aa24.19■■□□□ 1.46
ERBB2-212ENST00000582788 POGZQ7Z3K3 1410 aa24.19■■□□□ 1.46
ERBB2-212ENST00000582788 NEO1Q92859 1461 aa24.18■■□□□ 1.46
ERBB2-212ENST00000582788 KDM5CP41229 1560 aa24.18■■□□□ 1.46
ERBB2-212ENST00000582788 DEPDC5O75140 1603 aa24.17■■□□□ 1.46
ERBB2-212ENST00000582788 PPRC1Q5VV67 1664 aaKnown RBP24.16■■□□□ 1.46
ERBB2-212ENST00000582788 DHX29Q7Z478 1369 aaKnown RBP24.16■■□□□ 1.46
ERBB2-212ENST00000582788 TSHZ2Q9NRE2 1034 aa24.16■■□□□ 1.46
ERBB2-212ENST00000582788 PLA2R1Q13018 1463 aa24.15■■□□□ 1.46
ERBB2-212ENST00000582788 EIF2AK4Q9P2K8 1649 aaKnown RBP24.13■■□□□ 1.45
ERBB2-212ENST00000582788 ANP32CO43423 234 aa24.13■■□□□ 1.45
ERBB2-212ENST00000582788 MLH3Q9UHC1 1453 aa24.12■■□□□ 1.45
ERBB2-212ENST00000582788 CCDC144AA2RUR9 1427 aa24.11■■□□□ 1.45
ERBB2-212ENST00000582788 HECW2Q9P2P5 1572 aa24.1■■□□□ 1.45
ERBB2-212ENST00000582788 KIF3BO15066 747 aa24.1■■□□□ 1.45
ERBB2-212ENST00000582788 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
ERBB2-212ENST00000582788 ATP10AO60312 1499 aa24.09■■□□□ 1.45
ERBB2-212ENST00000582788 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.45
ERBB2-212ENST00000582788 E9PCH4 1651 aa24.08■■□□□ 1.45
ERBB2-212ENST00000582788 MROH1Q8NDA8 1641 aa24.08■■□□□ 1.45
ERBB2-212ENST00000582788 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
ERBB2-212ENST00000582788 A2MP01023 1474 aa24.07■■□□□ 1.44
ERBB2-212ENST00000582788 RAPGEF3O95398 923 aa24.06■■□□□ 1.44
ERBB2-212ENST00000582788 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
ERBB2-212ENST00000582788 UHRF1BP1Q6BDS2 1440 aa24.05■■□□□ 1.44
ERBB2-212ENST00000582788 FRMPD1Q5SYB0 1578 aa24.04■■□□□ 1.44
ERBB2-212ENST00000582788 KANK1Q14678 1352 aa24.04■■□□□ 1.44
ERBB2-212ENST00000582788 TET3O43151 1660 aa24.04■■□□□ 1.44
ERBB2-212ENST00000582788 ABCA6Q8N139 1617 aa24.03■■□□□ 1.44
ERBB2-212ENST00000582788 FKBP8Q14318 412 aa24.03■■□□□ 1.44
ERBB2-212ENST00000582788 RICTORQ6R327 1708 aa24.03■■□□□ 1.44
ERBB2-212ENST00000582788 ZNF326Q5BKZ1 582 aaKnown RBP24.03■■□□□ 1.44
ERBB2-212ENST00000582788 DCAF11Q8TEB1 546 aa24.01■■□□□ 1.43
ERBB2-212ENST00000582788 RNF17Q9BXT8 1623 aaKnown RBP23.99■■□□□ 1.43
ERBB2-212ENST00000582788 KDM2AQ9Y2K7 1162 aa23.99■■□□□ 1.43
ERBB2-212ENST00000582788 SPATA31E1Q6ZUB1 1445 aa23.99■■□□□ 1.43
ERBB2-212ENST00000582788 BCANQ96GW7 911 aa23.98■■□□□ 1.43
ERBB2-212ENST00000582788 SPHKAPQ2M3C7 1700 aa23.97■■□□□ 1.43
ERBB2-212ENST00000582788 PTPRTO14522 1441 aa23.97■■□□□ 1.43
ERBB2-212ENST00000582788 TRPM2O94759 1503 aa23.96■■□□□ 1.43
ERBB2-212ENST00000582788 RALGAPBQ86X10 1494 aa23.96■■□□□ 1.43
ERBB2-212ENST00000582788 RGL3Q3MIN7 710 aa23.96■■□□□ 1.43
ERBB2-212ENST00000582788 DIP2CQ9Y2E4 1556 aa23.96■■□□□ 1.43
ERBB2-212ENST00000582788 BCORL1Q5H9F3 1711 aa23.94■■□□□ 1.42
ERBB2-212ENST00000582788 WASHC2AQ641Q2 1341 aa23.94■■□□□ 1.42
ERBB2-212ENST00000582788 NEFLP07196 543 aa23.93■■□□□ 1.42
ERBB2-212ENST00000582788 LMTK2Q8IWU2 1503 aa23.92■■□□□ 1.42
ERBB2-212ENST00000582788 CEP152O94986 1710 aa23.92■■□□□ 1.42
ERBB2-212ENST00000582788 EFCAB6Q5THR3 1501 aa23.91■■□□□ 1.42
ERBB2-212ENST00000582788 YEATS2Q9ULM3 1422 aa23.9■■□□□ 1.42
ERBB2-212ENST00000582788 CLTCL1P53675 1640 aa23.9■■□□□ 1.42
ERBB2-212ENST00000582788 PRAG1Q86YV5 1406 aa23.9■■□□□ 1.42
ERBB2-212ENST00000582788 C11orf95C9JLR9 678 aaPredicted RBP23.89■■□□□ 1.42
ERBB2-212ENST00000582788 USP47Q96K76 1375 aa23.88■■□□□ 1.41
ERBB2-212ENST00000582788 GGT6Q6P531 493 aa23.88■■□□□ 1.41
ERBB2-212ENST00000582788 ZMYM4Q5VZL5 1548 aa23.87■■□□□ 1.41
ERBB2-212ENST00000582788 COL17A1Q9UMD9 1497 aaPredicted RBP23.87■■□□□ 1.41
ERBB2-212ENST00000582788 TRPM1Q7Z4N2 1603 aa23.86■■□□□ 1.41
ERBB2-212ENST00000582788 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
ERBB2-212ENST00000582788 CCDC7Q96M83 1385 aa23.84■■□□□ 1.41
ERBB2-212ENST00000582788 POLR1AO95602 1720 aaPredicted RBP23.82■■□□□ 1.4
ERBB2-212ENST00000582788 ABCC3O15438 1527 aa23.81■■□□□ 1.4
ERBB2-212ENST00000582788 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
ERBB2-212ENST00000582788 UGGT1Q9NYU2 1555 aa23.81■■□□□ 1.4
ERBB2-212ENST00000582788 ANP32EQ9BTT0 268 aa23.8■■□□□ 1.4
ERBB2-212ENST00000582788 NPATQ14207 1427 aa23.8■■□□□ 1.4
ERBB2-212ENST00000582788 CNTLNQ9NXG0 1405 aa23.8■■□□□ 1.4
ERBB2-212ENST00000582788 KIF7Q2M1P5 1343 aa23.79■■□□□ 1.4
ERBB2-212ENST00000582788 WASHC2CQ9Y4E1 1318 aa23.79■■□□□ 1.4
ERBB2-212ENST00000582788 NBPF1Q3BBV0 1214 aa23.77■■□□□ 1.4
ERBB2-212ENST00000582788 NEURL4Q96JN8 1562 aa23.77■■□□□ 1.4
ERBB2-212ENST00000582788 CAMSAP1Q5T5Y3 1602 aa23.76■■□□□ 1.39
ERBB2-212ENST00000582788 GPRASP1Q5JY77 1395 aa23.76■■□□□ 1.39
ERBB2-212ENST00000582788 MADDQ8WXG6 1647 aa23.74■■□□□ 1.39
ERBB2-212ENST00000582788 HNRNPUQ00839 825 aaKnown RBP eCLIP23.74■■□□□ 1.39
ERBB2-212ENST00000582788 LAMC1P11047 1609 aa23.73■■□□□ 1.39
ERBB2-212ENST00000582788 KIF1BO60333 1816 aa23.73■■□□□ 1.39
ERBB2-212ENST00000582788 ST20-MTHFSA0A0A6YYL1 179 aa23.72■■□□□ 1.39
ERBB2-212ENST00000582788 CFAP65Q6ZU64 1925 aaKnown RBP23.72■■□□□ 1.39
ERBB2-212ENST00000582788 ZC3H13Q5T200 1668 aaKnown RBP23.71■■□□□ 1.39
ERBB2-212ENST00000582788 MROH2AA6NES4 1674 aa23.7■■□□□ 1.38
ERBB2-212ENST00000582788 SIGLEC1Q9BZZ2 1709 aa23.7■■□□□ 1.38
ERBB2-212ENST00000582788 STAC3Q96MF2 364 aa23.69■■□□□ 1.38
ERBB2-212ENST00000582788 REREQ9P2R6 1566 aa23.69■■□□□ 1.38
ERBB2-212ENST00000582788 NOS1P29475 1434 aa23.67■■□□□ 1.38
ERBB2-212ENST00000582788 RBM19Q9Y4C8 960 aaKnown RBP23.66■■□□□ 1.38
ERBB2-212ENST00000582788 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
ERBB2-212ENST00000582788 ARID4BQ4LE39 1312 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms