RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 INO80Q9ULG1 1556 aaPredicted RBP15.23■□□□□ 0.03
TOP3A-211ENST00000581536 AGLP35573 1532 aa15.22■□□□□ 0.03
TOP3A-211ENST00000581536 HSPA2P54652 639 aa15.21■□□□□ 0.03
TOP3A-211ENST00000581536 GGT6Q6P531 493 aa15.2■□□□□ 0.02
TOP3A-211ENST00000581536 A2MP01023 1474 aa15.2■□□□□ 0.02
TOP3A-211ENST00000581536 SETD1BQ9UPS6 1966 aaKnown RBP15.19■□□□□ 0.02
TOP3A-211ENST00000581536 C3P01024 1663 aa15.19■□□□□ 0.02
TOP3A-211ENST00000581536 RSPH4AQ5TD94 716 aa15.18■□□□□ 0.02
TOP3A-211ENST00000581536 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
TOP3A-211ENST00000581536 LMTK3Q96Q04 1460 aa15.18■□□□□ 0.02
TOP3A-211ENST00000581536 ADGBQ8N7X0 1667 aa15.18■□□□□ 0.02
TOP3A-211ENST00000581536 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
TOP3A-211ENST00000581536 TSPY4P0CV99 314 aa15.17■□□□□ 0.02
TOP3A-211ENST00000581536 TSPY10P0CW01 314 aa15.17■□□□□ 0.02
TOP3A-211ENST00000581536 RTEL1-TNFRSF6BF6WH68 1400 aa15.17■□□□□ 0.02
TOP3A-211ENST00000581536 CCDC141Q6ZP82 1450 aa15.16■□□□□ 0.02
TOP3A-211ENST00000581536 PLXNC1O60486 1568 aa15.15■□□□□ 0.02
TOP3A-211ENST00000581536 DHX29Q7Z478 1369 aaKnown RBP15.15■□□□□ 0.02
TOP3A-211ENST00000581536 CLTCQ00610 1675 aaKnown RBP15.15■□□□□ 0.02
TOP3A-211ENST00000581536 ARHGEF5Q12774 1597 aa15.15■□□□□ 0.02
TOP3A-211ENST00000581536 KIF3BO15066 747 aa15.14■□□□□ 0.01
TOP3A-211ENST00000581536 PPARGC1BQ86YN6 1023 aaKnown RBP15.14■□□□□ 0.01
TOP3A-211ENST00000581536 MIA2Q96PC5 1412 aa15.14■□□□□ 0.01
TOP3A-211ENST00000581536 ZMYM3Q14202 1370 aa15.12■□□□□ 0.01
TOP3A-211ENST00000581536 PTPN23Q9H3S7 1636 aa15.11■□□□□ 0.01
TOP3A-211ENST00000581536 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
TOP3A-211ENST00000581536 PREX1Q8TCU6 1659 aa15.11■□□□□ 0.01
TOP3A-211ENST00000581536 CFAP65Q6ZU64 1925 aaKnown RBP15.08■□□□□ 0
TOP3A-211ENST00000581536 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0
TOP3A-211ENST00000581536 MROH2AA6NES4 1674 aa15.08■□□□□ 0
TOP3A-211ENST00000581536 ABCC5O15440 1437 aa15.08■□□□□ 0
TOP3A-211ENST00000581536 CNTLNQ9NXG0 1405 aa15.08■□□□□ 0
TOP3A-211ENST00000581536 RRP7BPQ9NSQ0 103 aa15.07■□□□□ 0
TOP3A-211ENST00000581536 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
TOP3A-211ENST00000581536 MAST1Q9Y2H9 1570 aa15.07■□□□□ 0
TOP3A-211ENST00000581536 STRCQ7RTU9 1775 aa15.06■□□□□ 0
TOP3A-211ENST00000581536 SPDYE2BA6NHP3 402 aa15.05■□□□□ -0
TOP3A-211ENST00000581536 SPDYE6P0CI01 402 aa15.05■□□□□ -0
TOP3A-211ENST00000581536 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
TOP3A-211ENST00000581536 FBXO31Q5XUX0 539 aaPredicted RBP15.05■□□□□ -0
TOP3A-211ENST00000581536 UHRF1BP1Q6BDS2 1440 aa15.04■□□□□ -0
TOP3A-211ENST00000581536 FAM50AQ14320 339 aaKnown RBP15.04■□□□□ -0
TOP3A-211ENST00000581536 CROCC2H7BZ55 1655 aa15.03■□□□□ -0
TOP3A-211ENST00000581536 TCOF1Q13428 1488 aaKnown RBP15.03■□□□□ -0
TOP3A-211ENST00000581536 WASHC2CQ9Y4E1 1318 aa15.03■□□□□ -0
TOP3A-211ENST00000581536 ILDR1Q86SU0 546 aaPredicted RBP15.03■□□□□ -0
TOP3A-211ENST00000581536 DAPK1P53355 1430 aa15.02■□□□□ -0
TOP3A-211ENST00000581536 PTPRKQ15262 1439 aa15.02■□□□□ -0
TOP3A-211ENST00000581536 DNMT1P26358 1616 aaKnown RBP15.02□□□□□ -0.01
TOP3A-211ENST00000581536 NPATQ14207 1427 aa14.99□□□□□ -0.01
TOP3A-211ENST00000581536 KIF15Q9NS87 1388 aa14.98□□□□□ -0.01
TOP3A-211ENST00000581536 DUOX2Q9NRD8 1548 aa14.97□□□□□ -0.01
TOP3A-211ENST00000581536 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
TOP3A-211ENST00000581536 CEP152O94986 1710 aa14.97□□□□□ -0.01
TOP3A-211ENST00000581536 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
TOP3A-211ENST00000581536 RNF17Q9BXT8 1623 aaKnown RBP14.96□□□□□ -0.01
TOP3A-211ENST00000581536 SPDYE4A6NLX3 237 aa14.96□□□□□ -0.01
TOP3A-211ENST00000581536 KDM5DQ9BY66 1539 aa14.96□□□□□ -0.02
TOP3A-211ENST00000581536 MROH1Q8NDA8 1641 aa14.95□□□□□ -0.02
TOP3A-211ENST00000581536 EIF2AK4Q9P2K8 1649 aaKnown RBP14.95□□□□□ -0.02
TOP3A-211ENST00000581536 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
TOP3A-211ENST00000581536 NCOA1Q15788 1441 aa14.95□□□□□ -0.02
TOP3A-211ENST00000581536 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
TOP3A-211ENST00000581536 ITGAEP38570 1179 aa14.94□□□□□ -0.02
TOP3A-211ENST00000581536 CAMSAP1Q5T5Y3 1602 aa14.94□□□□□ -0.02
TOP3A-211ENST00000581536 ANKRD30AQ9BXX3 1397 aa14.93□□□□□ -0.02
TOP3A-211ENST00000581536 PZPP20742 1482 aa14.93□□□□□ -0.02
TOP3A-211ENST00000581536 ABCC3O15438 1527 aa14.92□□□□□ -0.02
TOP3A-211ENST00000581536 TNRQ92752 1358 aa14.92□□□□□ -0.02
TOP3A-211ENST00000581536 CEP170BQ9Y4F5 1589 aaPredicted RBP14.91□□□□□ -0.02
TOP3A-211ENST00000581536 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
TOP3A-211ENST00000581536 ZNF142P52746 1687 aaPredicted RBP14.9□□□□□ -0.02
TOP3A-211ENST00000581536 FKBP8Q14318 412 aa14.9□□□□□ -0.02
TOP3A-211ENST00000581536 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
TOP3A-211ENST00000581536 ERBINQ96RT1 1412 aa14.9□□□□□ -0.02
TOP3A-211ENST00000581536 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
TOP3A-211ENST00000581536 ADGRL2O95490 1459 aa14.89□□□□□ -0.03
TOP3A-211ENST00000581536 FAM135AQ9P2D6 1515 aa14.88□□□□□ -0.03
TOP3A-211ENST00000581536 ZC3H13Q5T200 1668 aaKnown RBP14.88□□□□□ -0.03
TOP3A-211ENST00000581536 CERKQ8TCT0 537 aa14.88□□□□□ -0.03
TOP3A-211ENST00000581536 PTPRTO14522 1441 aa14.87□□□□□ -0.03
TOP3A-211ENST00000581536 DEPDC5O75140 1603 aa14.87□□□□□ -0.03
TOP3A-211ENST00000581536 FBXO41Q8TF61 875 aa14.85□□□□□ -0.03
TOP3A-211ENST00000581536 PRDM15P57071 1507 aaPredicted RBP14.85□□□□□ -0.03
TOP3A-211ENST00000581536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.85□□□□□ -0.03
TOP3A-211ENST00000581536 ERVK-7P63135 1459 aa14.84□□□□□ -0.03
TOP3A-211ENST00000581536 SPATA31D1Q6ZQQ2 1576 aa14.84□□□□□ -0.03
TOP3A-211ENST00000581536 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.03
TOP3A-211ENST00000581536 PKD2Q13563 968 aa14.83□□□□□ -0.04
TOP3A-211ENST00000581536 THEMISQ8N1K5 641 aaPredicted RBP14.83□□□□□ -0.04
TOP3A-211ENST00000581536 KANK1Q14678 1352 aa14.83□□□□□ -0.04
TOP3A-211ENST00000581536 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
TOP3A-211ENST00000581536 VWDEQ8N2E2 1590 aa14.81□□□□□ -0.04
TOP3A-211ENST00000581536 UGGT1Q9NYU2 1555 aa14.81□□□□□ -0.04
TOP3A-211ENST00000581536 ARHGAP31Q2M1Z3 1444 aa14.81□□□□□ -0.04
TOP3A-211ENST00000581536 NLRP1Q9C000 1473 aa14.81□□□□□ -0.04
TOP3A-211ENST00000581536 ANKLE2Q86XL3 938 aa14.8□□□□□ -0.04
TOP3A-211ENST00000581536 ZNF335Q9H4Z2 1342 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-211ENST00000581536 POLR1AO95602 1720 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-211ENST00000581536 ROCK1Q13464 1354 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms