RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 KDM5DQ9BY66 1539 aa21.76■■□□□ 1.07
SUPT4H1-205ENST00000581166 DUOX2Q9NRD8 1548 aa21.76■■□□□ 1.07
SUPT4H1-205ENST00000581166 PTPRKQ15262 1439 aa21.75■■□□□ 1.07
SUPT4H1-205ENST00000581166 RNF17Q9BXT8 1623 aaKnown RBP21.74■■□□□ 1.07
SUPT4H1-205ENST00000581166 WASHC2CQ9Y4E1 1318 aa21.74■■□□□ 1.07
SUPT4H1-205ENST00000581166 KIF15Q9NS87 1388 aa21.74■■□□□ 1.07
SUPT4H1-205ENST00000581166 FAM50AQ14320 339 aaKnown RBP21.71■■□□□ 1.07
SUPT4H1-205ENST00000581166 RRP7BPQ9NSQ0 103 aa21.71■■□□□ 1.07
SUPT4H1-205ENST00000581166 CHIC2Q9UKJ5 165 aa21.69■■□□□ 1.06
SUPT4H1-205ENST00000581166 ANKRD30AQ9BXX3 1397 aa21.69■■□□□ 1.06
SUPT4H1-205ENST00000581166 ERBINQ96RT1 1412 aa21.69■■□□□ 1.06
SUPT4H1-205ENST00000581166 PZPP20742 1482 aa21.68■■□□□ 1.06
SUPT4H1-205ENST00000581166 MYO3AQ8NEV4 1616 aa21.68■■□□□ 1.06
SUPT4H1-205ENST00000581166 STRCQ7RTU9 1775 aa21.68■■□□□ 1.06
SUPT4H1-205ENST00000581166 MROH1Q8NDA8 1641 aa21.67■■□□□ 1.06
SUPT4H1-205ENST00000581166 ZC3H13Q5T200 1668 aaKnown RBP21.66■■□□□ 1.06
SUPT4H1-205ENST00000581166 ZNF142P52746 1687 aaPredicted RBP21.66■■□□□ 1.06
SUPT4H1-205ENST00000581166 ABCC3O15438 1527 aa21.66■■□□□ 1.06
SUPT4H1-205ENST00000581166 NCOA1Q15788 1441 aa21.66■■□□□ 1.06
SUPT4H1-205ENST00000581166 ADGRL2O95490 1459 aa21.65■■□□□ 1.06
SUPT4H1-205ENST00000581166 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.06
SUPT4H1-205ENST00000581166 CEP170BQ9Y4F5 1589 aaPredicted RBP21.64■■□□□ 1.05
SUPT4H1-205ENST00000581166 FBXO31Q5XUX0 539 aaPredicted RBP21.63■■□□□ 1.05
SUPT4H1-205ENST00000581166 PPARGC1BQ86YN6 1023 aaKnown RBP21.63■■□□□ 1.05
SUPT4H1-205ENST00000581166 TNRQ92752 1358 aa21.62■■□□□ 1.05
SUPT4H1-205ENST00000581166 PRDM15P57071 1507 aaPredicted RBP21.61■■□□□ 1.05
SUPT4H1-205ENST00000581166 CAMSAP1Q5T5Y3 1602 aa21.61■■□□□ 1.05
SUPT4H1-205ENST00000581166 DEPDC5O75140 1603 aa21.6■■□□□ 1.05
SUPT4H1-205ENST00000581166 A2ML1A8K2U0 1454 aa21.59■■□□□ 1.05
SUPT4H1-205ENST00000581166 CEP152O94986 1710 aa21.59■■□□□ 1.05
SUPT4H1-205ENST00000581166 PTPRTO14522 1441 aa21.57■■□□□ 1.04
SUPT4H1-205ENST00000581166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.57■■□□□ 1.04
SUPT4H1-205ENST00000581166 PLA2R1Q13018 1463 aa21.56■■□□□ 1.04
SUPT4H1-205ENST00000581166 KANK1Q14678 1352 aa21.55■■□□□ 1.04
SUPT4H1-205ENST00000581166 ILDR1Q86SU0 546 aaPredicted RBP21.55■■□□□ 1.04
SUPT4H1-205ENST00000581166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.55■■□□□ 1.045e-10■■■□□ 17.7
SUPT4H1-205ENST00000581166 SPATA31D1Q6ZQQ2 1576 aa21.55■■□□□ 1.04
SUPT4H1-205ENST00000581166 NLRP1Q9C000 1473 aa21.55■■□□□ 1.04
SUPT4H1-205ENST00000581166 ARHGAP31Q2M1Z3 1444 aa21.53■■□□□ 1.04
SUPT4H1-205ENST00000581166 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
SUPT4H1-205ENST00000581166 ERVK-7P63135 1459 aa21.53■■□□□ 1.04
SUPT4H1-205ENST00000581166 PKD2Q13563 968 aa21.53■■□□□ 1.04
SUPT4H1-205ENST00000581166 ROCK1Q13464 1354 aa21.51■■□□□ 1.03
SUPT4H1-205ENST00000581166 VWDEQ8N2E2 1590 aa21.51■■□□□ 1.03
SUPT4H1-205ENST00000581166 NCKAP5LQ9HCH0 1330 aa21.51■■□□□ 1.03
SUPT4H1-205ENST00000581166 LMTK2Q8IWU2 1503 aa21.5■■□□□ 1.03
SUPT4H1-205ENST00000581166 CFAP65Q6ZU64 1925 aaKnown RBP21.49■■□□□ 1.03
SUPT4H1-205ENST00000581166 UGGT1Q9NYU2 1555 aa21.48■■□□□ 1.03
SUPT4H1-205ENST00000581166 THEMISQ8N1K5 641 aaPredicted RBP21.47■■□□□ 1.03
SUPT4H1-205ENST00000581166 RRBP1Q9P2E9 1410 aaKnown RBP21.47■■□□□ 1.03
SUPT4H1-205ENST00000581166 ITGAEP38570 1179 aa21.46■■□□□ 1.03
SUPT4H1-205ENST00000581166 CERKQ8TCT0 537 aa21.46■■□□□ 1.03
SUPT4H1-205ENST00000581166 FBXO41Q8TF61 875 aa21.46■■□□□ 1.03
SUPT4H1-205ENST00000581166 POLR1AO95602 1720 aaPredicted RBP21.42■■□□□ 1.02
SUPT4H1-205ENST00000581166 EFCAB6Q5THR3 1501 aa21.42■■□□□ 1.02
SUPT4H1-205ENST00000581166 UNC13BO14795 1591 aa21.41■■□□□ 1.02
SUPT4H1-205ENST00000581166 ANKLE2Q86XL3 938 aa21.4■■□□□ 1.02
SUPT4H1-205ENST00000581166 NEURL4Q96JN8 1562 aa21.39■■□□□ 1.01
SUPT4H1-205ENST00000581166 LTBP4Q8N2S1 1624 aa21.38■■□□□ 1.01
SUPT4H1-205ENST00000581166 UBR1Q8IWV7 1749 aa21.38■■□□□ 1.01
SUPT4H1-205ENST00000581166 TET3O43151 1660 aa21.37■■□□□ 1.01
SUPT4H1-205ENST00000581166 RPRD2Q5VT52 1461 aaKnown RBP21.37■■□□□ 1.01
SUPT4H1-205ENST00000581166 NOS1P29475 1434 aa21.37■■□□□ 1.01
SUPT4H1-205ENST00000581166 MED14O60244 1454 aa21.35■■□□□ 1.01
SUPT4H1-205ENST00000581166 PIK3C2BO00750 1634 aa21.34■■□□□ 1.01
SUPT4H1-205ENST00000581166 SYNMO15061 1565 aa21.34■■□□□ 1.01
SUPT4H1-205ENST00000581166 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
SUPT4H1-205ENST00000581166 ZNF335Q9H4Z2 1342 aaPredicted RBP21.33■■□□□ 1.01
SUPT4H1-205ENST00000581166 IQGAP3Q86VI3 1631 aa21.33■■□□□ 1
SUPT4H1-205ENST00000581166 IDI1Q13907 227 aa21.32■■□□□ 1
SUPT4H1-205ENST00000581166 NPHP4O75161 1426 aaPredicted RBP21.32■■□□□ 1
SUPT4H1-205ENST00000581166 SLIT1O75093 1534 aa21.31■■□□□ 1
SUPT4H1-205ENST00000581166 KDM5AP29375 1690 aaKnown RBP21.31■■□□□ 1
SUPT4H1-205ENST00000581166 ARHGAP23Q9P227 1491 aa21.31■■□□□ 1
SUPT4H1-205ENST00000581166 NUP155O75694 1391 aa21.31■■□□□ 1
SUPT4H1-205ENST00000581166 SLC52A1Q9NWF4 448 aa21.3■■□□□ 1
SUPT4H1-205ENST00000581166 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
SUPT4H1-205ENST00000581166 IQSEC2Q5JU85 1478 aa21.29■■□□□ 1
SUPT4H1-205ENST00000581166 IQGAP1P46940 1657 aa21.28■■□□□ 1
SUPT4H1-205ENST00000581166 SCAF11Q99590 1463 aaKnown RBP21.28■■□□□ 1
SUPT4H1-205ENST00000581166 E9PCH4 1651 aa21.28■■□□□ 1
SUPT4H1-205ENST00000581166 NAIPQ13075 1403 aa21.27■■□□□ 1
SUPT4H1-205ENST00000581166 TMEM2Q9UHN6 1383 aa21.26■□□□□ 0.99
SUPT4H1-205ENST00000581166 TXNDC2Q86VQ3 553 aa21.26■□□□□ 0.99
SUPT4H1-205ENST00000581166 LTKP29376 864 aa21.25■□□□□ 0.99
SUPT4H1-205ENST00000581166 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
SUPT4H1-205ENST00000581166 ADGRB3O60242 1522 aa21.24■□□□□ 0.99
SUPT4H1-205ENST00000581166 HFM1A2PYH4 1435 aa21.22■□□□□ 0.99
SUPT4H1-205ENST00000581166 CPS1P31327 1500 aa21.21■□□□□ 0.99
SUPT4H1-205ENST00000581166 TMEM131LA2VDJ0 1609 aa21.17■□□□□ 0.98
SUPT4H1-205ENST00000581166 MYO5BQ9ULV0 1848 aa21.15■□□□□ 0.98
SUPT4H1-205ENST00000581166 ZFYVE9O95405 1425 aa21.13■□□□□ 0.97
SUPT4H1-205ENST00000581166 HDGFP51858 240 aaKnown RBP21.12■□□□□ 0.97
SUPT4H1-205ENST00000581166 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
SUPT4H1-205ENST00000581166 STRCP1A6NGW2 1772 aa21.12■□□□□ 0.97
SUPT4H1-205ENST00000581166 CHGAP10645 457 aaKnown RBP21.12■□□□□ 0.97
SUPT4H1-205ENST00000581166 TRIM52Q96A61 297 aa21.12■□□□□ 0.97
SUPT4H1-205ENST00000581166 RIMS2Q9UQ26 1411 aa21.11■□□□□ 0.97
SUPT4H1-205ENST00000581166 UBAP1LF5GYI3 381 aa21.1■□□□□ 0.97
SUPT4H1-205ENST00000581166 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms