RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 GGT6Q6P531 493 aa16.65■□□□□ 0.26
SUPT4H1-204ENST00000580947 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
SUPT4H1-204ENST00000580947 ABCC5O15440 1437 aa16.64■□□□□ 0.25
SUPT4H1-204ENST00000580947 ZC3H13Q5T200 1668 aaKnown RBP16.63■□□□□ 0.25
SUPT4H1-204ENST00000580947 TSPY4P0CV99 314 aa16.63■□□□□ 0.25
SUPT4H1-204ENST00000580947 TSPY10P0CW01 314 aa16.63■□□□□ 0.25
SUPT4H1-204ENST00000580947 APLP2Q06481 763 aa16.63■□□□□ 0.25
SUPT4H1-204ENST00000580947 CEP152O94986 1710 aa16.62■□□□□ 0.25
SUPT4H1-204ENST00000580947 DUOX2Q9NRD8 1548 aa16.61■□□□□ 0.25
SUPT4H1-204ENST00000580947 CEP170BQ9Y4F5 1589 aaPredicted RBP16.61■□□□□ 0.25
SUPT4H1-204ENST00000580947 KIF3BO15066 747 aa16.61■□□□□ 0.25
SUPT4H1-204ENST00000580947 DAPK1P53355 1430 aa16.61■□□□□ 0.25
SUPT4H1-204ENST00000580947 DEPDC5O75140 1603 aa16.6■□□□□ 0.25
SUPT4H1-204ENST00000580947 PZPP20742 1482 aa16.6■□□□□ 0.25
SUPT4H1-204ENST00000580947 ABCC3O15438 1527 aa16.6■□□□□ 0.25
SUPT4H1-204ENST00000580947 NCOA1Q15788 1441 aa16.59■□□□□ 0.25
SUPT4H1-204ENST00000580947 CAMSAP1Q5T5Y3 1602 aa16.59■□□□□ 0.25
SUPT4H1-204ENST00000580947 CFAP65Q6ZU64 1925 aaKnown RBP16.58■□□□□ 0.25
SUPT4H1-204ENST00000580947 PRDM15P57071 1507 aaPredicted RBP16.57■□□□□ 0.24
SUPT4H1-204ENST00000580947 KIF15Q9NS87 1388 aa16.55■□□□□ 0.24
SUPT4H1-204ENST00000580947 PTPRTO14522 1441 aa16.54■□□□□ 0.24
SUPT4H1-204ENST00000580947 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
SUPT4H1-204ENST00000580947 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
SUPT4H1-204ENST00000580947 ADGRL2O95490 1459 aa16.54■□□□□ 0.24
SUPT4H1-204ENST00000580947 PLA2R1Q13018 1463 aa16.54■□□□□ 0.24
SUPT4H1-204ENST00000580947 POLR1AO95602 1720 aaPredicted RBP16.53■□□□□ 0.24
SUPT4H1-204ENST00000580947 SPATA31D1Q6ZQQ2 1576 aa16.53■□□□□ 0.24
SUPT4H1-204ENST00000580947 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
SUPT4H1-204ENST00000580947 FBXO31Q5XUX0 539 aaPredicted RBP16.51■□□□□ 0.23
SUPT4H1-204ENST00000580947 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
SUPT4H1-204ENST00000580947 TNRQ92752 1358 aa16.51■□□□□ 0.23
SUPT4H1-204ENST00000580947 LTBP4Q8N2S1 1624 aa16.49■□□□□ 0.23
SUPT4H1-204ENST00000580947 NEURL4Q96JN8 1562 aa16.48■□□□□ 0.23
SUPT4H1-204ENST00000580947 RRP7BPQ9NSQ0 103 aa16.48■□□□□ 0.23
SUPT4H1-204ENST00000580947 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
SUPT4H1-204ENST00000580947 ERVK-7P63135 1459 aa16.48■□□□□ 0.23
SUPT4H1-204ENST00000580947 ANKRD30AQ9BXX3 1397 aa16.47■□□□□ 0.23
SUPT4H1-204ENST00000580947 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
SUPT4H1-204ENST00000580947 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
SUPT4H1-204ENST00000580947 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
SUPT4H1-204ENST00000580947 LMTK2Q8IWU2 1503 aa16.45■□□□□ 0.22
SUPT4H1-204ENST00000580947 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
SUPT4H1-204ENST00000580947 CHIC2Q9UKJ5 165 aa16.44■□□□□ 0.22
SUPT4H1-204ENST00000580947 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
SUPT4H1-204ENST00000580947 UGGT1Q9NYU2 1555 aa16.43■□□□□ 0.22
SUPT4H1-204ENST00000580947 CERKQ8TCT0 537 aa16.43■□□□□ 0.22
SUPT4H1-204ENST00000580947 FAM50AQ14320 339 aaKnown RBP16.42■□□□□ 0.22
SUPT4H1-204ENST00000580947 EFCAB6Q5THR3 1501 aa16.41■□□□□ 0.22
SUPT4H1-204ENST00000580947 UNC13BO14795 1591 aa16.41■□□□□ 0.22
SUPT4H1-204ENST00000580947 PKD2Q13563 968 aa16.4■□□□□ 0.22
SUPT4H1-204ENST00000580947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.39■□□□□ 0.21
SUPT4H1-204ENST00000580947 ANKRD50Q9ULJ7 1429 aa16.39■□□□□ 0.21
SUPT4H1-204ENST00000580947 KDM5AP29375 1690 aaKnown RBP16.39■□□□□ 0.21
SUPT4H1-204ENST00000580947 SYNMO15061 1565 aa16.38■□□□□ 0.21
SUPT4H1-204ENST00000580947 PIK3C2BO00750 1634 aa16.38■□□□□ 0.21
SUPT4H1-204ENST00000580947 TET3O43151 1660 aa16.38■□□□□ 0.21
SUPT4H1-204ENST00000580947 GCC2Q8IWJ2 1684 aa16.38■□□□□ 0.21
SUPT4H1-204ENST00000580947 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
SUPT4H1-204ENST00000580947 MED14O60244 1454 aa16.37■□□□□ 0.21
SUPT4H1-204ENST00000580947 IQGAP1P46940 1657 aa16.37■□□□□ 0.21
SUPT4H1-204ENST00000580947 IQSEC2Q5JU85 1478 aa16.36■□□□□ 0.21
SUPT4H1-204ENST00000580947 PPARGC1BQ86YN6 1023 aaKnown RBP16.35■□□□□ 0.21
SUPT4H1-204ENST00000580947 KANK1Q14678 1352 aa16.35■□□□□ 0.21
SUPT4H1-204ENST00000580947 IQGAP3Q86VI3 1631 aa16.34■□□□□ 0.21
SUPT4H1-204ENST00000580947 STRCP1A6NGW2 1772 aa16.34■□□□□ 0.21
SUPT4H1-204ENST00000580947 MYO5BQ9ULV0 1848 aa16.34■□□□□ 0.21
SUPT4H1-204ENST00000580947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.215e-10■■■□□ 17.7
SUPT4H1-204ENST00000580947 NOS1P29475 1434 aa16.34■□□□□ 0.21
SUPT4H1-204ENST00000580947 RRBP1Q9P2E9 1410 aaKnown RBP16.34■□□□□ 0.21
SUPT4H1-204ENST00000580947 ARHGAP23Q9P227 1491 aa16.34■□□□□ 0.21
SUPT4H1-204ENST00000580947 SLIT1O75093 1534 aa16.34■□□□□ 0.21
SUPT4H1-204ENST00000580947 THEMISQ8N1K5 641 aaPredicted RBP16.33■□□□□ 0.2
SUPT4H1-204ENST00000580947 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.2
SUPT4H1-204ENST00000580947 E9PCH4 1651 aa16.33■□□□□ 0.2
SUPT4H1-204ENST00000580947 RPRD2Q5VT52 1461 aaKnown RBP16.31■□□□□ 0.2
SUPT4H1-204ENST00000580947 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
SUPT4H1-204ENST00000580947 ANKLE2Q86XL3 938 aa16.29■□□□□ 0.2
SUPT4H1-204ENST00000580947 ADGRB3O60242 1522 aa16.28■□□□□ 0.2
SUPT4H1-204ENST00000580947 SCAF11Q99590 1463 aaKnown RBP16.27■□□□□ 0.19
SUPT4H1-204ENST00000580947 CPS1P31327 1500 aa16.26■□□□□ 0.19
SUPT4H1-204ENST00000580947 TMEM131LA2VDJ0 1609 aa16.25■□□□□ 0.19
SUPT4H1-204ENST00000580947 IDI1Q13907 227 aa16.24■□□□□ 0.19
SUPT4H1-204ENST00000580947 XIRP1Q702N8 1843 aaKnown RBP16.24■□□□□ 0.19
SUPT4H1-204ENST00000580947 LTKP29376 864 aa16.23■□□□□ 0.19
SUPT4H1-204ENST00000580947 TMEM2Q9UHN6 1383 aa16.23■□□□□ 0.19
SUPT4H1-204ENST00000580947 ITGAEP38570 1179 aa16.22■□□□□ 0.19
SUPT4H1-204ENST00000580947 SPHKAPQ2M3C7 1700 aa16.22■□□□□ 0.19
SUPT4H1-204ENST00000580947 ALKQ9UM73 1620 aa16.21■□□□□ 0.19
SUPT4H1-204ENST00000580947 NAIPQ13075 1403 aa16.2■□□□□ 0.18
SUPT4H1-204ENST00000580947 SLC52A1Q9NWF4 448 aa16.19■□□□□ 0.18
SUPT4H1-204ENST00000580947 ZFYVE9O95405 1425 aa16.18■□□□□ 0.18
SUPT4H1-204ENST00000580947 NUP155O75694 1391 aa16.17■□□□□ 0.18
SUPT4H1-204ENST00000580947 TXNDC2Q86VQ3 553 aa16.17■□□□□ 0.18
SUPT4H1-204ENST00000580947 LRRC7Q96NW7 1537 aa16.17■□□□□ 0.18
SUPT4H1-204ENST00000580947 HFM1A2PYH4 1435 aa16.15■□□□□ 0.18
SUPT4H1-204ENST00000580947 CHD2O14647 1828 aaKnown RBP16.14■□□□□ 0.17
SUPT4H1-204ENST00000580947 NWD1Q149M9 1564 aa16.13■□□□□ 0.17
SUPT4H1-204ENST00000580947 STAG3Q9UJ98 1225 aa16.12■□□□□ 0.17
SUPT4H1-204ENST00000580947 EID1Q9Y6B2 187 aa16.12■□□□□ 0.17
SUPT4H1-204ENST00000580947 UBAP1LF5GYI3 381 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms