RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 POGZQ7Z3K3 1410 aa8.97□□□□□ -0.97
PPP4R1-217ENST00000580583 SCAPERQ9BY12 1400 aa8.97□□□□□ -0.97
PPP4R1-217ENST00000580583 MIER1Q8N108 512 aa8.97□□□□□ -0.97
PPP4R1-217ENST00000580583 L3MBTL2Q969R5 705 aa8.97□□□□□ -0.97
PPP4R1-217ENST00000580583 HECW2Q9P2P5 1572 aa8.97□□□□□ -0.97
PPP4R1-217ENST00000580583 MAP3K4Q9Y6R4 1608 aa8.96□□□□□ -0.98
PPP4R1-217ENST00000580583 TET3O43151 1660 aa8.96□□□□□ -0.98
PPP4R1-217ENST00000580583 CCDC144AA2RUR9 1427 aa8.96□□□□□ -0.98
PPP4R1-217ENST00000580583 CD109Q6YHK3 1445 aa8.96□□□□□ -0.98
PPP4R1-217ENST00000580583 RALGAPBQ86X10 1494 aa8.96□□□□□ -0.98
PPP4R1-217ENST00000580583 NEO1Q92859 1461 aa8.96□□□□□ -0.98
PPP4R1-217ENST00000580583 GLI2P10070 1586 aa8.95□□□□□ -0.98
PPP4R1-217ENST00000580583 VWDEQ8N2E2 1590 aa8.95□□□□□ -0.98
PPP4R1-217ENST00000580583 MROH1Q8NDA8 1641 aa8.95□□□□□ -0.98
PPP4R1-217ENST00000580583 KIDINS220Q9ULH0 1771 aa8.95□□□□□ -0.98
PPP4R1-217ENST00000580583 UHRF1BP1Q6BDS2 1440 aa8.95□□□□□ -0.98
PPP4R1-217ENST00000580583 ATP10AO60312 1499 aa8.95□□□□□ -0.98
PPP4R1-217ENST00000580583 RNF17Q9BXT8 1623 aaKnown RBP8.94□□□□□ -0.98
PPP4R1-217ENST00000580583 POLR1AO95602 1720 aaPredicted RBP8.94□□□□□ -0.98
PPP4R1-217ENST00000580583 TRPM2O94759 1503 aa8.94□□□□□ -0.98
PPP4R1-217ENST00000580583 CENPBP07199 599 aaPredicted RBP8.93□□□□□ -0.98
PPP4R1-217ENST00000580583 PLA2R1Q13018 1463 aa8.93□□□□□ -0.98
PPP4R1-217ENST00000580583 ABCA6Q8N139 1617 aa8.93□□□□□ -0.98
PPP4R1-217ENST00000580583 E9PCH4 1651 aa8.93□□□□□ -0.98
PPP4R1-217ENST00000580583 SPHKAPQ2M3C7 1700 aa8.93□□□□□ -0.98
PPP4R1-217ENST00000580583 BCORL1Q5H9F3 1711 aa8.93□□□□□ -0.98
PPP4R1-217ENST00000580583 FRMPD1Q5SYB0 1578 aa8.92□□□□□ -0.98
PPP4R1-217ENST00000580583 DIP2BQ9P265 1576 aa8.92□□□□□ -0.98
PPP4R1-217ENST00000580583 EFCAB6Q5THR3 1501 aa8.92□□□□□ -0.98
PPP4R1-217ENST00000580583 MLH3Q9UHC1 1453 aa8.92□□□□□ -0.98
PPP4R1-217ENST00000580583 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
PPP4R1-217ENST00000580583 AFAP1Q8N556 730 aa8.92□□□□□ -0.98
PPP4R1-217ENST00000580583 A2MP01023 1474 aa8.91□□□□□ -0.98
PPP4R1-217ENST00000580583 KANK1Q14678 1352 aa8.91□□□□□ -0.98
PPP4R1-217ENST00000580583 CEP152O94986 1710 aa8.91□□□□□ -0.98
PPP4R1-217ENST00000580583 LMTK2Q8IWU2 1503 aa8.9□□□□□ -0.98
PPP4R1-217ENST00000580583 DHX29Q7Z478 1369 aaKnown RBP8.9□□□□□ -0.98
PPP4R1-217ENST00000580583 HSPA5P11021 654 aaKnown RBP8.9□□□□□ -0.98
PPP4R1-217ENST00000580583 NBPF8Q3BBV2 869 aa8.9□□□□□ -0.98
PPP4R1-217ENST00000580583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.9□□□□□ -0.982e-10■□□□□ 10.5
PPP4R1-217ENST00000580583 RICTORQ6R327 1708 aa8.9□□□□□ -0.98
PPP4R1-217ENST00000580583 LAMC1P11047 1609 aa8.9□□□□□ -0.99
PPP4R1-217ENST00000580583 TRPM1Q7Z4N2 1603 aa8.9□□□□□ -0.99
PPP4R1-217ENST00000580583 DIP2CQ9Y2E4 1556 aa8.9□□□□□ -0.99
PPP4R1-217ENST00000580583 SPATA31E1Q6ZUB1 1445 aa8.89□□□□□ -0.99
PPP4R1-217ENST00000580583 PPRC1Q5VV67 1664 aaKnown RBP8.89□□□□□ -0.99
PPP4R1-217ENST00000580583 HIRIP3Q9BW71 556 aaPredicted RBP8.89□□□□□ -0.99
PPP4R1-217ENST00000580583 CLTCL1P53675 1640 aa8.89□□□□□ -0.99
PPP4R1-217ENST00000580583 PRAG1Q86YV5 1406 aa8.88□□□□□ -0.99
PPP4R1-217ENST00000580583 CNTLNQ9NXG0 1405 aa8.88□□□□□ -0.99
PPP4R1-217ENST00000580583 USP47Q96K76 1375 aa8.88□□□□□ -0.99
PPP4R1-217ENST00000580583 NEURL4Q96JN8 1562 aa8.88□□□□□ -0.99
PPP4R1-217ENST00000580583 DDX10Q13206 875 aaKnown RBP8.88□□□□□ -0.99
PPP4R1-217ENST00000580583 ZMYM4Q5VZL5 1548 aa8.88□□□□□ -0.99
PPP4R1-217ENST00000580583 PTPRTO14522 1441 aa8.88□□□□□ -0.99
PPP4R1-217ENST00000580583 YTHDC1Q96MU7 727 aaKnown RBP8.87□□□□□ -0.99
PPP4R1-217ENST00000580583 MADDQ8WXG6 1647 aa8.87□□□□□ -0.99
PPP4R1-217ENST00000580583 CCDC7Q96M83 1385 aa8.86□□□□□ -0.99
PPP4R1-217ENST00000580583 WASHC2AQ641Q2 1341 aa8.86□□□□□ -0.99
PPP4R1-217ENST00000580583 ZC3H13Q5T200 1668 aaKnown RBP8.86□□□□□ -0.99
PPP4R1-217ENST00000580583 ZNF326Q5BKZ1 582 aaKnown RBP8.86□□□□□ -0.99
PPP4R1-217ENST00000580583 MYT1LQ9UL68 1186 aa8.86□□□□□ -0.99
PPP4R1-217ENST00000580583 ABCC3O15438 1527 aa8.85□□□□□ -0.99
PPP4R1-217ENST00000580583 CAMSAP1Q5T5Y3 1602 aa8.84□□□□□ -0.99
PPP4R1-217ENST00000580583 KIF3BO15066 747 aa8.84□□□□□ -0.99
PPP4R1-217ENST00000580583 CYB5RLQ6IPT4 315 aa8.84□□□□□ -0.99
PPP4R1-217ENST00000580583 DMRT2Q9Y5R5 561 aa8.84□□□□□ -0.99
PPP4R1-217ENST00000580583 GPRASP1Q5JY77 1395 aa8.84□□□□□ -0.99
PPP4R1-217ENST00000580583 ANP32CO43423 234 aa8.83□□□□□ -1
PPP4R1-217ENST00000580583 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
PPP4R1-217ENST00000580583 ROCK2O75116 1388 aaKnown RBP8.83□□□□□ -1
PPP4R1-217ENST00000580583 ADGRB3O60242 1522 aa8.82□□□□□ -1
PPP4R1-217ENST00000580583 CCER2I3L3R5 266 aa8.82□□□□□ -1
PPP4R1-217ENST00000580583 IFT172Q9UG01 1749 aa8.82□□□□□ -1
PPP4R1-217ENST00000580583 MYOM2P54296 1465 aa8.82□□□□□ -1
PPP4R1-217ENST00000580583 UGGT1Q9NYU2 1555 aa8.82□□□□□ -1
PPP4R1-217ENST00000580583 REREQ9P2R6 1566 aa8.82□□□□□ -1
PPP4R1-217ENST00000580583 MROH2AA6NES4 1674 aa8.81□□□□□ -1
PPP4R1-217ENST00000580583 KIF7Q2M1P5 1343 aa8.81□□□□□ -1
PPP4R1-217ENST00000580583 IQGAP1P46940 1657 aa8.81□□□□□ -1
PPP4R1-217ENST00000580583 ARID4BQ4LE39 1312 aaPredicted RBP8.8□□□□□ -1
PPP4R1-217ENST00000580583 ARHGEF40Q8TER5 1519 aa8.8□□□□□ -1
PPP4R1-217ENST00000580583 KIAA1210Q9ULL0 1709 aa8.8□□□□□ -1
PPP4R1-217ENST00000580583 KIF1BO60333 1816 aa8.8□□□□□ -1
PPP4R1-217ENST00000580583 CARD11Q9BXL7 1154 aa8.8□□□□□ -1
PPP4R1-217ENST00000580583 KDM2AQ9Y2K7 1162 aa8.8□□□□□ -1
PPP4R1-217ENST00000580583 NPATQ14207 1427 aa8.8□□□□□ -1
PPP4R1-217ENST00000580583 YEATS2Q9ULM3 1422 aa8.8□□□□□ -1
PPP4R1-217ENST00000580583 COL17A1Q9UMD9 1497 aaPredicted RBP8.79□□□□□ -1
PPP4R1-217ENST00000580583 RNF39Q9H2S5 420 aa8.79□□□□□ -1
PPP4R1-217ENST00000580583 KIF13AQ9H1H9 1805 aa8.79□□□□□ -1
PPP4R1-217ENST00000580583 RAPGEF3O95398 923 aa8.78□□□□□ -1
PPP4R1-217ENST00000580583 PIK3C2BO00750 1634 aa8.78□□□□□ -1
PPP4R1-217ENST00000580583 TSPOAP1O95153 1857 aa8.78□□□□□ -1
PPP4R1-217ENST00000580583 SCAF1Q9H7N4 1312 aaKnown RBP8.78□□□□□ -1
PPP4R1-217ENST00000580583 AGLP35573 1532 aa8.77□□□□□ -1.01
PPP4R1-217ENST00000580583 C11orf95C9JLR9 678 aaPredicted RBP8.77□□□□□ -1.01
PPP4R1-217ENST00000580583 FAM69CQ0P6D2 419 aa8.77□□□□□ -1.01
PPP4R1-217ENST00000580583 RGL3Q3MIN7 710 aa8.77□□□□□ -1.01
PPP4R1-217ENST00000580583 ARHGAP31Q2M1Z3 1444 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms