RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
RFFL-207ENST00000580569 KIF14Q15058 1648 aa11.84□□□□□ -0.51
RFFL-207ENST00000580569 EHBP1L1Q8N3D4 1523 aa11.82□□□□□ -0.52
RFFL-207ENST00000580569 CNTLNQ9NXG0 1405 aa11.82□□□□□ -0.52
RFFL-207ENST00000580569 CCDC18Q5T9S5 1454 aa11.82□□□□□ -0.52
RFFL-207ENST00000580569 KIDINS220Q9ULH0 1771 aa11.82□□□□□ -0.52
RFFL-207ENST00000580569 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
RFFL-207ENST00000580569 ARHGAP5Q13017 1502 aa11.81□□□□□ -0.52
RFFL-207ENST00000580569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.81□□□□□ -0.52
RFFL-207ENST00000580569 AFAP1Q8N556 730 aa11.81□□□□□ -0.52
RFFL-207ENST00000580569 CAMSAP1Q5T5Y3 1602 aa11.81□□□□□ -0.52
RFFL-207ENST00000580569 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
RFFL-207ENST00000580569 NPATQ14207 1427 aa11.8□□□□□ -0.52
RFFL-207ENST00000580569 PREX2Q70Z35 1606 aa11.79□□□□□ -0.52
RFFL-207ENST00000580569 PKD2Q13563 968 aa11.79□□□□□ -0.52
RFFL-207ENST00000580569 CDK11AQ9UQ88 783 aaPredicted RBP11.79□□□□□ -0.52
RFFL-207ENST00000580569 TROQ12816 1431 aaPredicted RBP11.78□□□□□ -0.52
RFFL-207ENST00000580569 ABCC1P33527 1531 aa11.78□□□□□ -0.52
RFFL-207ENST00000580569 TAOK2Q9UL54 1235 aa11.78□□□□□ -0.52
RFFL-207ENST00000580569 PLA2R1Q13018 1463 aa11.77□□□□□ -0.52
RFFL-207ENST00000580569 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
RFFL-207ENST00000580569 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
RFFL-207ENST00000580569 ESF1Q9H501 851 aaKnown RBP11.76□□□□□ -0.53
RFFL-207ENST00000580569 CDC42BPAQ5VT25 1732 aa11.76□□□□□ -0.53
RFFL-207ENST00000580569 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
RFFL-207ENST00000580569 MYO3AQ8NEV4 1616 aa11.75□□□□□ -0.53
RFFL-207ENST00000580569 FGD6Q6ZV73 1430 aa11.75□□□□□ -0.53
RFFL-207ENST00000580569 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
RFFL-207ENST00000580569 ATP1B4Q9UN42 357 aaPredicted RBP11.74□□□□□ -0.53
RFFL-207ENST00000580569 MTUS2Q5JR59 1369 aa11.74□□□□□ -0.53
RFFL-207ENST00000580569 PTPN23Q9H3S7 1636 aa11.74□□□□□ -0.53
RFFL-207ENST00000580569 UBAP1LF5GYI3 381 aa11.73□□□□□ -0.53
RFFL-207ENST00000580569 CLTCQ00610 1675 aaKnown RBP11.73□□□□□ -0.53
RFFL-207ENST00000580569 MED1Q15648 1581 aaPredicted RBP11.73□□□□□ -0.53
RFFL-207ENST00000580569 ZNF335Q9H4Z2 1342 aaPredicted RBP11.73□□□□□ -0.53
RFFL-207ENST00000580569 MYT1LQ9UL68 1186 aa11.73□□□□□ -0.53
RFFL-207ENST00000580569 CEP170BQ9Y4F5 1589 aaPredicted RBP11.72□□□□□ -0.53
RFFL-207ENST00000580569 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
RFFL-207ENST00000580569 ZMYM3Q14202 1370 aa11.72□□□□□ -0.53
RFFL-207ENST00000580569 CLSPNQ9HAW4 1339 aa11.72□□□□□ -0.53
RFFL-207ENST00000580569 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
RFFL-207ENST00000580569 SAMD9LQ8IVG5 1584 aa11.71□□□□□ -0.53
RFFL-207ENST00000580569 NCKAP5LQ9HCH0 1330 aa11.7□□□□□ -0.54
RFFL-207ENST00000580569 PLXNC1O60486 1568 aa11.7□□□□□ -0.54
RFFL-207ENST00000580569 SETD5Q9C0A6 1442 aa11.69□□□□□ -0.54
RFFL-207ENST00000580569 RAB3GAP2Q9H2M9 1393 aa11.68□□□□□ -0.54
RFFL-207ENST00000580569 GCC2Q8IWJ2 1684 aa11.68□□□□□ -0.54
RFFL-207ENST00000580569 PTPRKQ15262 1439 aa11.68□□□□□ -0.54
RFFL-207ENST00000580569 CPS1P31327 1500 aa11.67□□□□□ -0.54
RFFL-207ENST00000580569 DNMT1P26358 1616 aaKnown RBP11.67□□□□□ -0.54
RFFL-207ENST00000580569 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
RFFL-207ENST00000580569 MIA2Q96PC5 1412 aa11.66□□□□□ -0.54
RFFL-207ENST00000580569 ADGBQ8N7X0 1667 aa11.65□□□□□ -0.54
RFFL-207ENST00000580569 ATP7AQ04656 1500 aa11.65□□□□□ -0.55
RFFL-207ENST00000580569 NEURL4Q96JN8 1562 aa11.64□□□□□ -0.55
RFFL-207ENST00000580569 HSPA1LP34931 641 aa11.64□□□□□ -0.55
RFFL-207ENST00000580569 FAM50AQ14320 339 aaKnown RBP11.64□□□□□ -0.55
RFFL-207ENST00000580569 KDM2AQ9Y2K7 1162 aa11.64□□□□□ -0.55
RFFL-207ENST00000580569 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
RFFL-207ENST00000580569 A2ML1A8K2U0 1454 aa11.63□□□□□ -0.55
RFFL-207ENST00000580569 TOM1O60784 492 aa11.63□□□□□ -0.55
RFFL-207ENST00000580569 ITGAEP38570 1179 aa11.63□□□□□ -0.55
RFFL-207ENST00000580569 A2MP01023 1474 aa11.63□□□□□ -0.55
RFFL-207ENST00000580569 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
RFFL-207ENST00000580569 ALKQ9UM73 1620 aa11.62□□□□□ -0.55
RFFL-207ENST00000580569 TPRNQ4KMQ1 711 aa11.62□□□□□ -0.55
RFFL-207ENST00000580569 SHANK2Q9UPX8 1470 aa11.62□□□□□ -0.55
RFFL-207ENST00000580569 SPAG9O60271 1321 aaKnown RBP11.61□□□□□ -0.55
RFFL-207ENST00000580569 KIAA1107Q9UPP5 1409 aa11.61□□□□□ -0.55
RFFL-207ENST00000580569 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
RFFL-207ENST00000580569 VWDEQ8N2E2 1590 aa11.6□□□□□ -0.55
RFFL-207ENST00000580569 PLEKHH2Q8IVE3 1493 aa11.6□□□□□ -0.55
RFFL-207ENST00000580569 BBXQ8WY36 941 aaPredicted RBP11.6□□□□□ -0.55
RFFL-207ENST00000580569 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
RFFL-207ENST00000580569 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
RFFL-207ENST00000580569 NAIPQ13075 1403 aa11.6□□□□□ -0.55
RFFL-207ENST00000580569 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
RFFL-207ENST00000580569 FAM135AQ9P2D6 1515 aa11.59□□□□□ -0.55
RFFL-207ENST00000580569 MED14O60244 1454 aa11.57□□□□□ -0.56
RFFL-207ENST00000580569 PIP4K2BP78356 416 aa11.57□□□□□ -0.56
RFFL-207ENST00000580569 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
RFFL-207ENST00000580569 STRCP1A6NGW2 1772 aa11.56□□□□□ -0.56
RFFL-207ENST00000580569 HNRNPMP52272 730 aaKnown RBP eCLIP11.56□□□□□ -0.56
RFFL-207ENST00000580569 GGT6Q6P531 493 aa11.56□□□□□ -0.56
RFFL-207ENST00000580569 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
RFFL-207ENST00000580569 CFAP44Q96MT7 982 aa11.55□□□□□ -0.56
RFFL-207ENST00000580569 IQGAP1P46940 1657 aa11.55□□□□□ -0.56
RFFL-207ENST00000580569 SYNMO15061 1565 aa11.54□□□□□ -0.56
RFFL-207ENST00000580569 RNF17Q9BXT8 1623 aaKnown RBP11.54□□□□□ -0.56
RFFL-207ENST00000580569 POLA2Q14181 598 aa11.54□□□□□ -0.56
RFFL-207ENST00000580569 ZNF777Q9ULD5 760 aaPredicted RBP11.54□□□□□ -0.56
RFFL-207ENST00000580569 PZPP20742 1482 aa11.54□□□□□ -0.56
RFFL-207ENST00000580569 RTEL1-TNFRSF6BF6WH68 1400 aa11.53□□□□□ -0.56
RFFL-207ENST00000580569 DAPK1P53355 1430 aa11.53□□□□□ -0.56
RFFL-207ENST00000580569 TNRQ92752 1358 aa11.53□□□□□ -0.56
RFFL-207ENST00000580569 ABCC5O15440 1437 aa11.52□□□□□ -0.56
RFFL-207ENST00000580569 CAMSAP2Q08AD1 1489 aa11.52□□□□□ -0.56
RFFL-207ENST00000580569 NLRP1Q9C000 1473 aa11.52□□□□□ -0.56
RFFL-207ENST00000580569 KDM5DQ9BY66 1539 aa11.52□□□□□ -0.57
RFFL-207ENST00000580569 ZNF316A6NFI3 1004 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms