RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
SENP3-203ENST00000580231 BOLA1Q9Y3E2 137 aa13.52□□□□□ -0.25
SENP3-203ENST00000580231 SYNJ2O15056 1496 aa13.52□□□□□ -0.25
SENP3-203ENST00000580231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.5□□□□□ -0.25
SENP3-203ENST00000580231 CHMP7Q8WUX9 453 aaPredicted RBP13.5□□□□□ -0.25
SENP3-203ENST00000580231 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
SENP3-203ENST00000580231 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
SENP3-203ENST00000580231 G3V3G9 751 aa13.48□□□□□ -0.25
SENP3-203ENST00000580231 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
SENP3-203ENST00000580231 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
SENP3-203ENST00000580231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
SENP3-203ENST00000580231 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
SENP3-203ENST00000580231 CYB5RLQ6IPT4 315 aa13.45□□□□□ -0.26
SENP3-203ENST00000580231 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
SENP3-203ENST00000580231 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
SENP3-203ENST00000580231 HECW1Q76N89 1606 aa13.44□□□□□ -0.26
SENP3-203ENST00000580231 NUP160Q12769 1436 aa13.44□□□□□ -0.26
SENP3-203ENST00000580231 SOX12O15370 315 aa13.42□□□□□ -0.26
SENP3-203ENST00000580231 MARVELD3Q96A59 401 aa13.42□□□□□ -0.26
SENP3-203ENST00000580231 DISP1Q96F81 1524 aa13.42□□□□□ -0.26
SENP3-203ENST00000580231 KIAA0556O60303 1618 aa13.42□□□□□ -0.26
SENP3-203ENST00000580231 EHBP1L1Q8N3D4 1523 aa13.41□□□□□ -0.26
SENP3-203ENST00000580231 CARMIL2Q6F5E8 1435 aa13.4□□□□□ -0.26
SENP3-203ENST00000580231 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
SENP3-203ENST00000580231 CEP170Q5SW79 1584 aa13.39□□□□□ -0.27
SENP3-203ENST00000580231 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
SENP3-203ENST00000580231 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
SENP3-203ENST00000580231 EPRSP07814 1512 aaKnown RBP13.39□□□□□ -0.27
SENP3-203ENST00000580231 MS4A4AQ96JQ5 239 aa13.37□□□□□ -0.27
SENP3-203ENST00000580231 FGD6Q6ZV73 1430 aa13.37□□□□□ -0.27
SENP3-203ENST00000580231 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
SENP3-203ENST00000580231 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
SENP3-203ENST00000580231 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
SENP3-203ENST00000580231 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
SENP3-203ENST00000580231 SETD5Q9C0A6 1442 aa13.36□□□□□ -0.27
SENP3-203ENST00000580231 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
SENP3-203ENST00000580231 MYOM3Q5VTT5 1437 aa13.35□□□□□ -0.27
SENP3-203ENST00000580231 HOXB3P14651 431 aaPredicted RBP13.34□□□□□ -0.27
SENP3-203ENST00000580231 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
SENP3-203ENST00000580231 MICALL2Q8IY33 904 aa13.33□□□□□ -0.28
SENP3-203ENST00000580231 RAPGEF6Q8TEU7 1601 aa13.32□□□□□ -0.28
SENP3-203ENST00000580231 ECM2O94769 699 aaPredicted RBP13.32□□□□□ -0.28
SENP3-203ENST00000580231 ITGAEP38570 1179 aa13.32□□□□□ -0.28
SENP3-203ENST00000580231 EMP3P54852 163 aa13.32□□□□□ -0.28
SENP3-203ENST00000580231 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
SENP3-203ENST00000580231 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
SENP3-203ENST00000580231 RAB3GAP2Q9H2M9 1393 aa13.31□□□□□ -0.28
SENP3-203ENST00000580231 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
SENP3-203ENST00000580231 MAGI3Q5TCQ9 1506 aa13.29□□□□□ -0.28
SENP3-203ENST00000580231 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
SENP3-203ENST00000580231 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
SENP3-203ENST00000580231 PKD2Q13563 968 aa13.28□□□□□ -0.28
SENP3-203ENST00000580231 TMEM92Q6UXU6 159 aa13.28□□□□□ -0.28
SENP3-203ENST00000580231 STK24Q9Y6E0 443 aa13.28□□□□□ -0.28
SENP3-203ENST00000580231 ACIN1Q9UKV3 1341 aaKnown RBP13.28□□□□□ -0.28
SENP3-203ENST00000580231 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.29
SENP3-203ENST00000580231 SHROOM2Q13796 1616 aa13.27□□□□□ -0.29
SENP3-203ENST00000580231 NLRP6P59044 892 aa13.26□□□□□ -0.29
SENP3-203ENST00000580231 FBXO22Q8NEZ5 403 aa13.26□□□□□ -0.29
SENP3-203ENST00000580231 PTPN23Q9H3S7 1636 aa13.26□□□□□ -0.29
SENP3-203ENST00000580231 POTEB3A0JP26 581 aa13.25□□□□□ -0.29
SENP3-203ENST00000580231 POTEBQ6S5H4 581 aa13.25□□□□□ -0.29
SENP3-203ENST00000580231 HS3ST6Q96QI5 342 aa13.25□□□□□ -0.29
SENP3-203ENST00000580231 FAM205CA6NFA0 338 aa13.24□□□□□ -0.29
SENP3-203ENST00000580231 STK25O00506 426 aa13.24□□□□□ -0.29
SENP3-203ENST00000580231 DOK7Q18PE1 504 aa13.24□□□□□ -0.29
SENP3-203ENST00000580231 ABCA8O94911 1581 aa13.24□□□□□ -0.29
SENP3-203ENST00000580231 TROQ12816 1431 aaPredicted RBP13.23□□□□□ -0.29
SENP3-203ENST00000580231 ZNF316A6NFI3 1004 aaPredicted RBP13.23□□□□□ -0.29
SENP3-203ENST00000580231 RGL2O15211 777 aa13.23□□□□□ -0.29
SENP3-203ENST00000580231 ZNF710Q8N1W2 664 aa13.23□□□□□ -0.29
SENP3-203ENST00000580231 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
SENP3-203ENST00000580231 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
SENP3-203ENST00000580231 HOXB1P14653 301 aaPredicted RBP13.22□□□□□ -0.29
SENP3-203ENST00000580231 PLB1Q6P1J6 1458 aa13.22□□□□□ -0.29
SENP3-203ENST00000580231 PTPRGP23470 1445 aa13.22□□□□□ -0.29
SENP3-203ENST00000580231 MFRPQ9BY79 579 aa13.21□□□□□ -0.29
SENP3-203ENST00000580231 TIMELESSQ9UNS1 1208 aa13.21□□□□□ -0.29
SENP3-203ENST00000580231 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
SENP3-203ENST00000580231 PLEKHD1A6NEE1 506 aa13.2□□□□□ -0.3
SENP3-203ENST00000580231 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
SENP3-203ENST00000580231 PTPRKQ15262 1439 aa13.19□□□□□ -0.3
SENP3-203ENST00000580231 ADCY10Q96PN6 1610 aa13.18□□□□□ -0.3
SENP3-203ENST00000580231 NAIPQ13075 1403 aa13.17□□□□□ -0.3
SENP3-203ENST00000580231 ATP10BO94823 1461 aa13.16□□□□□ -0.3
SENP3-203ENST00000580231 ARID3CA6NKF2 412 aa13.16□□□□□ -0.3
SENP3-203ENST00000580231 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
SENP3-203ENST00000580231 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
SENP3-203ENST00000580231 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
SENP3-203ENST00000580231 ROCK1Q13464 1354 aa13.15□□□□□ -0.3
SENP3-203ENST00000580231 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.31
SENP3-203ENST00000580231 UACAQ9BZF9 1416 aa13.14□□□□□ -0.31
SENP3-203ENST00000580231 MAPKBP1O60336 1514 aa13.14□□□□□ -0.31
SENP3-203ENST00000580231 MMRN1Q13201 1228 aa13.14□□□□□ -0.31
SENP3-203ENST00000580231 GPATCH8Q9UKJ3 1502 aaKnown RBP13.13□□□□□ -0.31
SENP3-203ENST00000580231 DIEXFQ68CQ4 756 aaKnown RBP13.12□□□□□ -0.31
SENP3-203ENST00000580231 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
SENP3-203ENST00000580231 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
SENP3-203ENST00000580231 DAPK1P53355 1430 aa13.11□□□□□ -0.31
SENP3-203ENST00000580231 GCC2Q8IWJ2 1684 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms