RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 CLTCQ00610 1675 aaKnown RBP40.38■■■■■ 4.05
LIMD2-208ENST00000579814 PPARGC1BQ86YN6 1023 aaKnown RBP40.38■■■■■ 4.05
LIMD2-208ENST00000579814 PTPRKQ15262 1439 aa40.35■■■■■ 4.05
LIMD2-208ENST00000579814 DUOX2Q9NRD8 1548 aa40.35■■■■■ 4.05
LIMD2-208ENST00000579814 ANKRD30AQ9BXX3 1397 aa40.35■■■■■ 4.05
LIMD2-208ENST00000579814 DNMT1P26358 1616 aaKnown RBP40.34■■■■■ 4.05
LIMD2-208ENST00000579814 FAM135AQ9P2D6 1515 aa40.32■■■■■ 4.04
LIMD2-208ENST00000579814 KDM5DQ9BY66 1539 aa40.31■■■■■ 4.04
LIMD2-208ENST00000579814 ERBINQ96RT1 1412 aa40.25■■■■■ 4.03
LIMD2-208ENST00000579814 FBXO31Q5XUX0 539 aaPredicted RBP40.25■■■■■ 4.03
LIMD2-208ENST00000579814 DMRT2Q9Y5R5 561 aa40.25■■■■■ 4.03
LIMD2-208ENST00000579814 NCOA1Q15788 1441 aa40.25■■■■■ 4.03
LIMD2-208ENST00000579814 CROCC2H7BZ55 1655 aa40.24■■■■■ 4.03
LIMD2-208ENST00000579814 EIF2AK4Q9P2K8 1649 aaKnown RBP40.23■■■■■ 4.03
LIMD2-208ENST00000579814 PZPP20742 1482 aa40.19■■■■■ 4.03
LIMD2-208ENST00000579814 RNF17Q9BXT8 1623 aaKnown RBP40.19■■■■■ 4.02
LIMD2-208ENST00000579814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.17■■■■■ 4.02
LIMD2-208ENST00000579814 TNRQ92752 1358 aa40.16■■■■■ 4.02
LIMD2-208ENST00000579814 ADGRL2O95490 1459 aa40.14■■■■■ 4.02
LIMD2-208ENST00000579814 ABCC3O15438 1527 aa40.13■■■■■ 4.01
LIMD2-208ENST00000579814 KANK1Q14678 1352 aa40.1■■■■■ 4.01
LIMD2-208ENST00000579814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.07■■■■■ 4
LIMD2-208ENST00000579814 MROH1Q8NDA8 1641 aa40.06■■■■■ 4
LIMD2-208ENST00000579814 ITGAEP38570 1179 aa40.06■■■■■ 4
LIMD2-208ENST00000579814 A2ML1A8K2U0 1454 aa40.04■■■■■ 4
LIMD2-208ENST00000579814 MYO3AQ8NEV4 1616 aa40.03■■■■■ 4
LIMD2-208ENST00000579814 CEP170BQ9Y4F5 1589 aaPredicted RBP40.03■■■■■ 4
LIMD2-208ENST00000579814 ANKRD50Q9ULJ7 1429 aa40.02■■■■■ 4
LIMD2-208ENST00000579814 ZC3H13Q5T200 1668 aaKnown RBP40.02■■■■■ 4
LIMD2-208ENST00000579814 CAMSAP1Q5T5Y3 1602 aa40.01■■■■■ 4
LIMD2-208ENST00000579814 PRDM15P57071 1507 aaPredicted RBP40.01■■■■□ 3.99
LIMD2-208ENST00000579814 PTPRTO14522 1441 aa40■■■■□ 3.99
LIMD2-208ENST00000579814 PKD2Q13563 968 aa40■■■■□ 3.99
LIMD2-208ENST00000579814 ILDR1Q86SU0 546 aaPredicted RBP39.99■■■■□ 3.99
LIMD2-208ENST00000579814 ROCK1Q13464 1354 aa39.98■■■■□ 3.99
LIMD2-208ENST00000579814 NCKAP5LQ9HCH0 1330 aa39.98■■■■□ 3.99
LIMD2-208ENST00000579814 STRCQ7RTU9 1775 aa39.98■■■■□ 3.99
LIMD2-208ENST00000579814 PLA2R1Q13018 1463 aa39.95■■■■□ 3.99
LIMD2-208ENST00000579814 NLRP1Q9C000 1473 aa39.95■■■■□ 3.99
LIMD2-208ENST00000579814 ARHGAP31Q2M1Z3 1444 aa39.95■■■■□ 3.99
LIMD2-208ENST00000579814 THEMISQ8N1K5 641 aaPredicted RBP39.95■■■■□ 3.99
LIMD2-208ENST00000579814 ZNF142P52746 1687 aaPredicted RBP39.94■■■■□ 3.98
LIMD2-208ENST00000579814 ERVK-7P63135 1459 aa39.92■■■■□ 3.98
LIMD2-208ENST00000579814 DEPDC5O75140 1603 aa39.9■■■■□ 3.98
LIMD2-208ENST00000579814 RRBP1Q9P2E9 1410 aaKnown RBP39.89■■■■□ 3.98
LIMD2-208ENST00000579814 SPATA31D1Q6ZQQ2 1576 aa39.89■■■■□ 3.98
LIMD2-208ENST00000579814 CEP152O94986 1710 aa39.87■■■■□ 3.97
LIMD2-208ENST00000579814 CERKQ8TCT0 537 aa39.86■■■■□ 3.97
LIMD2-208ENST00000579814 FBXO41Q8TF61 875 aa39.84■■■■□ 3.97
LIMD2-208ENST00000579814 LMTK2Q8IWU2 1503 aa39.84■■■■□ 3.97
LIMD2-208ENST00000579814 ANKLE2Q86XL3 938 aa39.83■■■■□ 3.97
LIMD2-208ENST00000579814 VWDEQ8N2E2 1590 aa39.81■■■■□ 3.96
LIMD2-208ENST00000579814 UGGT1Q9NYU2 1555 aa39.8■■■■□ 3.96
LIMD2-208ENST00000579814 STAG3Q9UJ98 1225 aa39.7■■■■□ 3.95
LIMD2-208ENST00000579814 CFAP65Q6ZU64 1925 aaKnown RBP39.66■■■■□ 3.94
LIMD2-208ENST00000579814 IDI1Q13907 227 aa39.66■■■■□ 3.94
LIMD2-208ENST00000579814 NUP155O75694 1391 aa39.66■■■■□ 3.94
LIMD2-208ENST00000579814 EFCAB6Q5THR3 1501 aa39.65■■■■□ 3.94
LIMD2-208ENST00000579814 SLC52A1Q9NWF4 448 aa39.64■■■■□ 3.94
LIMD2-208ENST00000579814 NOS1P29475 1434 aa39.64■■■■□ 3.94
LIMD2-208ENST00000579814 ZNF335Q9H4Z2 1342 aaPredicted RBP39.63■■■■□ 3.93
LIMD2-208ENST00000579814 RPRD2Q5VT52 1461 aaKnown RBP39.62■■■■□ 3.93
LIMD2-208ENST00000579814 UNC13BO14795 1591 aa39.6■■■■□ 3.93
LIMD2-208ENST00000579814 TXNDC2Q86VQ3 553 aa39.57■■■■□ 3.93
LIMD2-208ENST00000579814 NPHP4O75161 1426 aaPredicted RBP39.57■■■■□ 3.92
LIMD2-208ENST00000579814 EID1Q9Y6B2 187 aa39.56■■■■□ 3.92
LIMD2-208ENST00000579814 LTBP4Q8N2S1 1624 aa39.55■■■■□ 3.92
LIMD2-208ENST00000579814 MED14O60244 1454 aa39.54■■■■□ 3.92
LIMD2-208ENST00000579814 TET3O43151 1660 aa39.52■■■■□ 3.92
LIMD2-208ENST00000579814 NEURL4Q96JN8 1562 aa39.52■■■■□ 3.92
LIMD2-208ENST00000579814 NAIPQ13075 1403 aa39.52■■■■□ 3.92
LIMD2-208ENST00000579814 LTKP29376 864 aa39.51■■■■□ 3.92
LIMD2-208ENST00000579814 TMEM2Q9UHN6 1383 aa39.49■■■■□ 3.91
LIMD2-208ENST00000579814 UBR1Q8IWV7 1749 aa39.49■■■■□ 3.91
LIMD2-208ENST00000579814 SYNMO15061 1565 aa39.49■■■■□ 3.91
LIMD2-208ENST00000579814 POLR1AO95602 1720 aaPredicted RBP39.47■■■■□ 3.91
LIMD2-208ENST00000579814 SCAF11Q99590 1463 aaKnown RBP39.47■■■■□ 3.91
LIMD2-208ENST00000579814 ARHGAP23Q9P227 1491 aa39.47■■■■□ 3.91
LIMD2-208ENST00000579814 SLIT1O75093 1534 aa39.45■■■■□ 3.91
LIMD2-208ENST00000579814 PIK3C2BO00750 1634 aa39.45■■■■□ 3.91
LIMD2-208ENST00000579814 IQGAP3Q86VI3 1631 aa39.45■■■■□ 3.91
LIMD2-208ENST00000579814 HFM1A2PYH4 1435 aa39.44■■■■□ 3.9
LIMD2-208ENST00000579814 GCC2Q8IWJ2 1684 aa39.4■■■■□ 3.9
LIMD2-208ENST00000579814 IQSEC2Q5JU85 1478 aa39.39■■■■□ 3.9
LIMD2-208ENST00000579814 TRIM52Q96A61 297 aa39.39■■■■□ 3.9
LIMD2-208ENST00000579814 CHGAP10645 457 aaKnown RBP39.37■■■■□ 3.89
LIMD2-208ENST00000579814 HDGFP51858 240 aaKnown RBP39.35■■■■□ 3.89
LIMD2-208ENST00000579814 ADGRB3O60242 1522 aa39.34■■■■□ 3.89
LIMD2-208ENST00000579814 KDM5AP29375 1690 aaKnown RBP39.33■■■■□ 3.89
LIMD2-208ENST00000579814 E9PCH4 1651 aa39.32■■■■□ 3.89
LIMD2-208ENST00000579814 IQGAP1P46940 1657 aa39.32■■■■□ 3.89
LIMD2-208ENST00000579814 CPS1P31327 1500 aa39.29■■■■□ 3.88
LIMD2-208ENST00000579814 BCANQ96GW7 911 aa39.25■■■■□ 3.87
LIMD2-208ENST00000579814 PPP1R15AO75807 674 aaPredicted RBP39.24■■■■□ 3.87
LIMD2-208ENST00000579814 UBAP1LF5GYI3 381 aa39.23■■■■□ 3.87
LIMD2-208ENST00000579814 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.23■■■■□ 3.87
LIMD2-208ENST00000579814 SLC4A1APQ9BWU0 796 aaKnown RBP39.23■■■■□ 3.87
LIMD2-208ENST00000579814 RIMS2Q9UQ26 1411 aa39.21■■■■□ 3.87
LIMD2-208ENST00000579814 SLC26A8Q96RN1 970 aa39.19■■■■□ 3.86
LIMD2-208ENST00000579814 ZFYVE9O95405 1425 aa39.17■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms