RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 KIF3BO15066 747 aa25.09■■□□□ 1.61
RARA-209ENST00000579727 DUOX2Q9NRD8 1548 aa25.08■■□□□ 1.61
RARA-209ENST00000579727 CEBPAP49715 358 aaPredicted RBP25.08■■□□□ 1.61
RARA-209ENST00000579727 ESF1Q9H501 851 aaKnown RBP25.08■■□□□ 1.61
RARA-209ENST00000579727 RRP7BPQ9NSQ0 103 aa25.08■■□□□ 1.61
RARA-209ENST00000579727 EIF2AK4Q9P2K8 1649 aaKnown RBP25.07■■□□□ 1.6
RARA-209ENST00000579727 PTPRKQ15262 1439 aa25.05■■□□□ 1.6
RARA-209ENST00000579727 MROH2AA6NES4 1674 aa25.05■■□□□ 1.6
RARA-209ENST00000579727 ITGAEP38570 1179 aa25.05■■□□□ 1.6
RARA-209ENST00000579727 ANKRD30AQ9BXX3 1397 aa25.04■■□□□ 1.6
RARA-209ENST00000579727 ADGRL2O95490 1459 aa25.03■■□□□ 1.6
RARA-209ENST00000579727 RNF17Q9BXT8 1623 aaKnown RBP25.03■■□□□ 1.6
RARA-209ENST00000579727 CNTLNQ9NXG0 1405 aa25.03■■□□□ 1.6
RARA-209ENST00000579727 RRBP1Q9P2E9 1410 aaKnown RBP25.02■■□□□ 1.6
RARA-209ENST00000579727 SETD1BQ9UPS6 1966 aaKnown RBP25.01■■□□□ 1.59
RARA-209ENST00000579727 NCOA1Q15788 1441 aa25.01■■□□□ 1.59
RARA-209ENST00000579727 MROH1Q8NDA8 1641 aa25■■□□□ 1.59
RARA-209ENST00000579727 ERBINQ96RT1 1412 aa24.99■■□□□ 1.59
RARA-209ENST00000579727 KDM5DQ9BY66 1539 aa24.98■■□□□ 1.59
RARA-209ENST00000579727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.97■■□□□ 1.59
RARA-209ENST00000579727 CEP152O94986 1710 aa24.97■■□□□ 1.59
RARA-209ENST00000579727 ZMYM3Q14202 1370 aa24.95■■□□□ 1.59
RARA-209ENST00000579727 DEPDC5O75140 1603 aa24.93■■□□□ 1.58
RARA-209ENST00000579727 WASHC2CQ9Y4E1 1318 aa24.92■■□□□ 1.58
RARA-209ENST00000579727 ZC3H13Q5T200 1668 aaKnown RBP24.92■■□□□ 1.58
RARA-209ENST00000579727 ABCC3O15438 1527 aa24.91■■□□□ 1.58
RARA-209ENST00000579727 PRDM15P57071 1507 aaPredicted RBP24.91■■□□□ 1.58
RARA-209ENST00000579727 FAM135AQ9P2D6 1515 aa24.91■■□□□ 1.58
RARA-209ENST00000579727 PPP6R1Q9UPN7 881 aa24.9■■□□□ 1.58
RARA-209ENST00000579727 DMRT2Q9Y5R5 561 aa24.9■■□□□ 1.58
RARA-209ENST00000579727 LTBP4Q8N2S1 1624 aa24.9■■□□□ 1.58
RARA-209ENST00000579727 UHRF1BP1Q6BDS2 1440 aa24.88■■□□□ 1.57
RARA-209ENST00000579727 ANKRD50Q9ULJ7 1429 aa24.88■■□□□ 1.57
RARA-209ENST00000579727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.88■■□□□ 1.57
RARA-209ENST00000579727 CAMSAP1Q5T5Y3 1602 aa24.87■■□□□ 1.57
RARA-209ENST00000579727 ROCK1Q13464 1354 aa24.87■■□□□ 1.57
RARA-209ENST00000579727 PTPRTO14522 1441 aa24.85■■□□□ 1.57
RARA-209ENST00000579727 MYO3AQ8NEV4 1616 aa24.84■■□□□ 1.57
RARA-209ENST00000579727 PZPP20742 1482 aa24.83■■□□□ 1.56
RARA-209ENST00000579727 NPATQ14207 1427 aa24.82■■□□□ 1.56
RARA-209ENST00000579727 FBXO31Q5XUX0 539 aaPredicted RBP24.81■■□□□ 1.56
RARA-209ENST00000579727 GCC2Q8IWJ2 1684 aa24.79■■□□□ 1.56
RARA-209ENST00000579727 CFAP65Q6ZU64 1925 aaKnown RBP24.79■■□□□ 1.56
RARA-209ENST00000579727 UNC13BO14795 1591 aa24.79■■□□□ 1.56
RARA-209ENST00000579727 VWDEQ8N2E2 1590 aa24.79■■□□□ 1.56
RARA-209ENST00000579727 KANK1Q14678 1352 aa24.79■■□□□ 1.56
RARA-209ENST00000579727 IQSEC2Q5JU85 1478 aa24.77■■□□□ 1.56
RARA-209ENST00000579727 ZNF142P52746 1687 aaPredicted RBP24.75■■□□□ 1.55
RARA-209ENST00000579727 TNRQ92752 1358 aa24.74■■□□□ 1.55
RARA-209ENST00000579727 CEP170BQ9Y4F5 1589 aaPredicted RBP24.73■■□□□ 1.55
RARA-209ENST00000579727 LMTK2Q8IWU2 1503 aa24.73■■□□□ 1.55
RARA-209ENST00000579727 ERVK-7P63135 1459 aa24.72■■□□□ 1.55
RARA-209ENST00000579727 NAIPQ13075 1403 aa24.72■■□□□ 1.55
RARA-209ENST00000579727 EFCAB6Q5THR3 1501 aa24.71■■□□□ 1.55
RARA-209ENST00000579727 TET3O43151 1660 aa24.69■■□□□ 1.54
RARA-209ENST00000579727 IQGAP3Q86VI3 1631 aa24.68■■□□□ 1.54
RARA-209ENST00000579727 ARHGAP31Q2M1Z3 1444 aa24.68■■□□□ 1.54
RARA-209ENST00000579727 HFM1A2PYH4 1435 aa24.67■■□□□ 1.54
RARA-209ENST00000579727 A2ML1A8K2U0 1454 aa24.65■■□□□ 1.54
RARA-209ENST00000579727 NUP155O75694 1391 aa24.64■■□□□ 1.53
RARA-209ENST00000579727 E9PCH4 1651 aa24.62■■□□□ 1.53
RARA-209ENST00000579727 NLRP1Q9C000 1473 aa24.61■■□□□ 1.53
RARA-209ENST00000579727 SYNMO15061 1565 aa24.6■■□□□ 1.53
RARA-209ENST00000579727 UGGT1Q9NYU2 1555 aa24.59■■□□□ 1.53
RARA-209ENST00000579727 ZNF335Q9H4Z2 1342 aaPredicted RBP24.57■■□□□ 1.52
RARA-209ENST00000579727 PIK3C2BO00750 1634 aa24.57■■□□□ 1.52
RARA-209ENST00000579727 UBR1Q8IWV7 1749 aa24.55■■□□□ 1.52
RARA-209ENST00000579727 UBAP1LF5GYI3 381 aa24.55■■□□□ 1.52
RARA-209ENST00000579727 RPRD2Q5VT52 1461 aaKnown RBP24.54■■□□□ 1.52
RARA-209ENST00000579727 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
RARA-209ENST00000579727 NOS1P29475 1434 aa24.53■■□□□ 1.52
RARA-209ENST00000579727 TRIM52Q96A61 297 aa24.53■■□□□ 1.52
RARA-209ENST00000579727 POLR1AO95602 1720 aaPredicted RBP24.52■■□□□ 1.52
RARA-209ENST00000579727 PLA2R1Q13018 1463 aa24.51■■□□□ 1.51
RARA-209ENST00000579727 MED1Q15648 1581 aaPredicted RBP24.5■■□□□ 1.51
RARA-209ENST00000579727 SPHKAPQ2M3C7 1700 aa24.48■■□□□ 1.51
RARA-209ENST00000579727 IDI1Q13907 227 aa24.46■■□□□ 1.51
RARA-209ENST00000579727 NEURL4Q96JN8 1562 aa24.46■■□□□ 1.51
RARA-209ENST00000579727 SETD5Q9C0A6 1442 aa24.45■■□□□ 1.51
RARA-209ENST00000579727 MYO5BQ9ULV0 1848 aa24.45■■□□□ 1.5
RARA-209ENST00000579727 THEMISQ8N1K5 641 aaPredicted RBP24.45■■□□□ 1.5
RARA-209ENST00000579727 ADGRB3O60242 1522 aa24.45■■□□□ 1.5
RARA-209ENST00000579727 STAG3Q9UJ98 1225 aa24.43■■□□□ 1.5
RARA-209ENST00000579727 KDM5AP29375 1690 aaKnown RBP24.42■■□□□ 1.5
RARA-209ENST00000579727 RAB3GAP2Q9H2M9 1393 aa24.41■■□□□ 1.5
RARA-209ENST00000579727 PKD2Q13563 968 aa24.4■■□□□ 1.5
RARA-209ENST00000579727 SLC4A1APQ9BWU0 796 aaKnown RBP24.39■■□□□ 1.49
RARA-209ENST00000579727 HSPA1LP34931 641 aa24.38■■□□□ 1.49
RARA-209ENST00000579727 SLC52A1Q9NWF4 448 aa24.38■■□□□ 1.49
RARA-209ENST00000579727 TMEM131LA2VDJ0 1609 aa24.38■■□□□ 1.49
RARA-209ENST00000579727 SLIT1O75093 1534 aa24.37■■□□□ 1.49
RARA-209ENST00000579727 ANKLE2Q86XL3 938 aa24.37■■□□□ 1.49
RARA-209ENST00000579727 CHGAP10645 457 aaKnown RBP24.36■■□□□ 1.49
RARA-209ENST00000579727 ARHGAP23Q9P227 1491 aa24.36■■□□□ 1.49
RARA-209ENST00000579727 CLTCL1P53675 1640 aa24.35■■□□□ 1.49
RARA-209ENST00000579727 IQGAP1P46940 1657 aa24.35■■□□□ 1.49
RARA-209ENST00000579727 FOXD1Q16676 465 aa24.35■■□□□ 1.49
RARA-209ENST00000579727 TRPM2O94759 1503 aa24.35■■□□□ 1.49
RARA-209ENST00000579727 NPHP4O75161 1426 aaPredicted RBP24.34■■□□□ 1.49
RARA-209ENST00000579727 SCAF11Q99590 1463 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms