RNA–Protein interactions for RNA: ENST00000578886.1

TRAPPC8-206, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-206ENST00000578886 MAP3K9P80192 1104 aa11.32□□□□□ -0.6
TRAPPC8-206ENST00000578886 ZFRQ96KR1 1074 aaKnown RBP11.32□□□□□ -0.6
TRAPPC8-206ENST00000578886 PCDHGA10Q9Y5H3 936 aa11.32□□□□□ -0.6
TRAPPC8-206ENST00000578886 FBXW7Q969H0 707 aa11.31□□□□□ -0.6
TRAPPC8-206ENST00000578886 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
TRAPPC8-206ENST00000578886 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
TRAPPC8-206ENST00000578886 TYW1BQ6NUM6 668 aa11.28□□□□□ -0.6
TRAPPC8-206ENST00000578886 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
TRAPPC8-206ENST00000578886 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC8-206ENST00000578886 LCE2BO14633 110 aa11.26□□□□□ -0.61
TRAPPC8-206ENST00000578886 PHF14O94880 888 aa11.26□□□□□ -0.61
TRAPPC8-206ENST00000578886 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
TRAPPC8-206ENST00000578886 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
TRAPPC8-206ENST00000578886 GFRA3O60609 400 aa11.24□□□□□ -0.61
TRAPPC8-206ENST00000578886 MFSD10Q14728 455 aa11.24□□□□□ -0.61
TRAPPC8-206ENST00000578886 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
TRAPPC8-206ENST00000578886 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC8-206ENST00000578886 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
TRAPPC8-206ENST00000578886 TSR3Q9UJK0 312 aaKnown RBP11.23□□□□□ -0.61
TRAPPC8-206ENST00000578886 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
TRAPPC8-206ENST00000578886 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
TRAPPC8-206ENST00000578886 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC8-206ENST00000578886 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
TRAPPC8-206ENST00000578886 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
TRAPPC8-206ENST00000578886 AMER1Q5JTC6 1135 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC8-206ENST00000578886 NRG2O14511 850 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC8-206ENST00000578886 C6orf132Q5T0Z8 1188 aa11.17□□□□□ -0.62
TRAPPC8-206ENST00000578886 EPAS1Q99814 870 aa11.17□□□□□ -0.62
TRAPPC8-206ENST00000578886 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
TRAPPC8-206ENST00000578886 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-206ENST00000578886 V9GY48 417 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-206ENST00000578886 PPP4CP60510 307 aa11.09□□□□□ -0.63
TRAPPC8-206ENST00000578886 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
TRAPPC8-206ENST00000578886 DCAF8L2P0C7V8 631 aa11.06□□□□□ -0.64
TRAPPC8-206ENST00000578886 PACS2Q86VP3 889 aa11.06□□□□□ -0.64
TRAPPC8-206ENST00000578886 RBM33Q96EV2 1170 aaKnown RBP11.06□□□□□ -0.64
TRAPPC8-206ENST00000578886 PPP1R18Q6NYC8 613 aa11.05□□□□□ -0.64
TRAPPC8-206ENST00000578886 ZNF787Q6DD87 383 aa11.04□□□□□ -0.64
TRAPPC8-206ENST00000578886 MTRQ99707 1265 aa11.04□□□□□ -0.64
TRAPPC8-206ENST00000578886 IL21Q9HBE4 155 aa11.04□□□□□ -0.64
TRAPPC8-206ENST00000578886 TSKSQ9UJT2 592 aa11.04□□□□□ -0.64
TRAPPC8-206ENST00000578886 DPYSL4O14531 572 aa11.02□□□□□ -0.65
TRAPPC8-206ENST00000578886 CAMK2BQ13554 666 aa11.02□□□□□ -0.65
TRAPPC8-206ENST00000578886 SAMD7Q7Z3H4 446 aa11□□□□□ -0.65
TRAPPC8-206ENST00000578886 EN1Q05925 392 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC8-206ENST00000578886 DDX12PQ92771 950 aa10.99□□□□□ -0.65
TRAPPC8-206ENST00000578886 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
TRAPPC8-206ENST00000578886 PDZRN3Q9UPQ7 1066 aa10.99□□□□□ -0.65
TRAPPC8-206ENST00000578886 MAP3K7O43318 606 aa10.97□□□□□ -0.65
TRAPPC8-206ENST00000578886 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
TRAPPC8-206ENST00000578886 CADPS2Q86UW7 1296 aa10.97□□□□□ -0.65
TRAPPC8-206ENST00000578886 NBR1Q14596 966 aa10.96□□□□□ -0.65
TRAPPC8-206ENST00000578886 ZNF775Q96BV0 537 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC8-206ENST00000578886 SMAPO00193 183 aa10.94□□□□□ -0.66
TRAPPC8-206ENST00000578886 ZNF516Q92618 1163 aa10.93□□□□□ -0.66
TRAPPC8-206ENST00000578886 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
TRAPPC8-206ENST00000578886 NBPF26B4DH59 902 aa10.91□□□□□ -0.66
TRAPPC8-206ENST00000578886 GGCXP38435 758 aa10.91□□□□□ -0.66
TRAPPC8-206ENST00000578886 PRSS12P56730 875 aa10.91□□□□□ -0.66
TRAPPC8-206ENST00000578886 RNF40O75150 1001 aa10.89□□□□□ -0.67
TRAPPC8-206ENST00000578886 CERKQ8TCT0 537 aa10.89□□□□□ -0.67
TRAPPC8-206ENST00000578886 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
TRAPPC8-206ENST00000578886 APLP1P51693 650 aa10.88□□□□□ -0.67
TRAPPC8-206ENST00000578886 PDIA6Q15084 440 aa10.88□□□□□ -0.67
TRAPPC8-206ENST00000578886 TATDN2Q93075 761 aa10.88□□□□□ -0.67
TRAPPC8-206ENST00000578886 PNMA3Q9UL41 463 aa10.88□□□□□ -0.67
TRAPPC8-206ENST00000578886 NKX2-3Q8TAU0 364 aa10.87□□□□□ -0.67
TRAPPC8-206ENST00000578886 NECTIN2Q92692 538 aa10.86□□□□□ -0.67
TRAPPC8-206ENST00000578886 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
TRAPPC8-206ENST00000578886 HDGFP51858 240 aaKnown RBP10.85□□□□□ -0.67
TRAPPC8-206ENST00000578886 C3orf80F5H4A9 247 aa10.84□□□□□ -0.67
TRAPPC8-206ENST00000578886 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC8-206ENST00000578886 COPS2P61201 443 aa10.81□□□□□ -0.68
TRAPPC8-206ENST00000578886 BBXQ8WY36 941 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC8-206ENST00000578886 PKDCCQ504Y2 493 aa10.8□□□□□ -0.68
TRAPPC8-206ENST00000578886 TRIM67Q6ZTA4 783 aa10.8□□□□□ -0.68
TRAPPC8-206ENST00000578886 NUDT18Q6ZVK8 323 aa10.8□□□□□ -0.68
TRAPPC8-206ENST00000578886 RBM27Q9P2N5 1060 aaKnown RBP10.8□□□□□ -0.68
TRAPPC8-206ENST00000578886 MYT1Q01538 1121 aa10.78□□□□□ -0.68
TRAPPC8-206ENST00000578886 ZPR1O75312 459 aa10.77□□□□□ -0.69
TRAPPC8-206ENST00000578886 DGAT1O75907 488 aa10.77□□□□□ -0.69
TRAPPC8-206ENST00000578886 SLF2Q8IX21 1173 aa10.77□□□□□ -0.69
TRAPPC8-206ENST00000578886 SLC19A1P41440 591 aa10.76□□□□□ -0.69
TRAPPC8-206ENST00000578886 PRIM1P49642 420 aaKnown RBP10.76□□□□□ -0.69
TRAPPC8-206ENST00000578886 PRR20EP86478 221 aa10.74□□□□□ -0.69
TRAPPC8-206ENST00000578886 PRR20CP86479 221 aa10.74□□□□□ -0.69
TRAPPC8-206ENST00000578886 PRR20DP86480 221 aa10.74□□□□□ -0.69
TRAPPC8-206ENST00000578886 PRR20BP86481 221 aa10.74□□□□□ -0.69
TRAPPC8-206ENST00000578886 PRR20AP86496 221 aa10.74□□□□□ -0.69
TRAPPC8-206ENST00000578886 SWT1Q5T5J6 900 aaKnown RBP10.74□□□□□ -0.69
TRAPPC8-206ENST00000578886 RNF223E7ERA6 249 aa10.73□□□□□ -0.69
TRAPPC8-206ENST00000578886 PRR14Q9BWN1 585 aa10.73□□□□□ -0.69
TRAPPC8-206ENST00000578886 CDHR5Q9HBB8 845 aa10.73□□□□□ -0.69
TRAPPC8-206ENST00000578886 SLC4A3P48751 1232 aa10.72□□□□□ -0.69
TRAPPC8-206ENST00000578886 SPRYD7Q5W111 196 aa10.72□□□□□ -0.69
TRAPPC8-206ENST00000578886 GRXCR2A6NFK2 248 aa10.71□□□□□ -0.69
TRAPPC8-206ENST00000578886 POTECB2RU33 542 aa10.71□□□□□ -0.69
TRAPPC8-206ENST00000578886 EMID1Q96A84 441 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC8-206ENST00000578886 ZNF598Q86UK7 904 aaKnown RBP10.7□□□□□ -0.7
TRAPPC8-206ENST00000578886 PCDHB3Q9Y5E6 796 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms